RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 HPCAL4Q9UM19 191 aa4.99□□□□□ -1.61
COPA-203ENST00000481040 SNX9Q9Y5X1 595 aa4.99□□□□□ -1.61
COPA-203ENST00000481040 PFASO15067 1338 aa4.98□□□□□ -1.61
COPA-203ENST00000481040 A0A087X1B8 175 aa4.98□□□□□ -1.61
COPA-203ENST00000481040 TEX13DA0A0J9YY54 714 aaPredicted RBP4.98□□□□□ -1.61
COPA-203ENST00000481040 TMEM129A0AVI4 362 aa4.98□□□□□ -1.61
COPA-203ENST00000481040 MAGEB16A2A368 324 aa4.98□□□□□ -1.61
COPA-203ENST00000481040 ANKDD1BA6NHY2 528 aa4.98□□□□□ -1.61
COPA-203ENST00000481040 E5RJQ4 531 aa4.98□□□□□ -1.61
COPA-203ENST00000481040 H0YCG3 227 aa4.98□□□□□ -1.61
COPA-203ENST00000481040 SLC28A1O00337 649 aa4.98□□□□□ -1.61
COPA-203ENST00000481040 SCGB2A1O75556 95 aa4.98□□□□□ -1.61
COPA-203ENST00000481040 RFPL2O75678 378 aa4.98□□□□□ -1.61
COPA-203ENST00000481040 HSPA8P11142 646 aaKnown RBP4.98□□□□□ -1.61
COPA-203ENST00000481040 PDHBP11177 359 aa4.98□□□□□ -1.61
COPA-203ENST00000481040 PRG2P13727 222 aa4.98□□□□□ -1.61
COPA-203ENST00000481040 CSF2RAP15509 400 aa4.98□□□□□ -1.61
COPA-203ENST00000481040 PROZP22891 400 aa4.98□□□□□ -1.61
COPA-203ENST00000481040 SSTR1P30872 391 aa4.98□□□□□ -1.61
COPA-203ENST00000481040 SSTR2P30874 369 aa4.98□□□□□ -1.61
COPA-203ENST00000481040 AKT2P31751 481 aa4.98□□□□□ -1.61
COPA-203ENST00000481040 ARRB2P32121 409 aa4.98□□□□□ -1.61
COPA-203ENST00000481040 MNDAP41218 407 aa4.98□□□□□ -1.61
COPA-203ENST00000481040 SLC6A12P48065 614 aa4.98□□□□□ -1.61
COPA-203ENST00000481040 TDO2P48775 406 aa4.98□□□□□ -1.61
COPA-203ENST00000481040 CACNG1Q06432 222 aa4.98□□□□□ -1.61
COPA-203ENST00000481040 RAPSNQ13702 412 aa4.98□□□□□ -1.61
COPA-203ENST00000481040 GK2Q14410 553 aaPredicted RBP4.98□□□□□ -1.61
COPA-203ENST00000481040 PTGR1Q14914 329 aa4.98□□□□□ -1.61
COPA-203ENST00000481040 OASLQ15646 514 aaKnown RBP4.98□□□□□ -1.61
COPA-203ENST00000481040 TMEM35AQ53FP2 167 aa4.98□□□□□ -1.61
COPA-203ENST00000481040 FNBP1LQ5T0N5 605 aa4.98□□□□□ -1.61
COPA-203ENST00000481040 ZNF704Q6ZNC4 412 aaPredicted RBP4.98□□□□□ -1.61
COPA-203ENST00000481040 ZNF788Q6ZQV5 615 aa4.98□□□□□ -1.61
COPA-203ENST00000481040 TMPRSS12Q86WS5 348 aa4.98□□□□□ -1.61
COPA-203ENST00000481040 CROCCP3Q8IVE0 287 aa4.98□□□□□ -1.61
COPA-203ENST00000481040 GGHQ92820 318 aa4.98□□□□□ -1.61
COPA-203ENST00000481040 C16orf58Q96GQ5 468 aa4.98□□□□□ -1.61
COPA-203ENST00000481040 TSSK2Q96PF2 358 aa4.98□□□□□ -1.61
COPA-203ENST00000481040 SPAG8Q99932 426 aaPredicted RBP4.98□□□□□ -1.61
COPA-203ENST00000481040 ERP44Q9BS26 406 aa4.98□□□□□ -1.61
COPA-203ENST00000481040 MRIQ9BWK5 157 aa4.98□□□□□ -1.61
COPA-203ENST00000481040 ATG10Q9H0Y0 220 aa4.98□□□□□ -1.61
COPA-203ENST00000481040 ARRDC1-AS1Q9H2J1 176 aa4.98□□□□□ -1.61
COPA-203ENST00000481040 PLA2G4CQ9UP65 541 aa4.98□□□□□ -1.61
COPA-203ENST00000481040 WDR37Q9Y2I8 494 aa4.98□□□□□ -1.61
COPA-203ENST00000481040 AMDHD2Q9Y303 409 aa4.98□□□□□ -1.61
COPA-203ENST00000481040 COL11A2P13942 1736 aaPredicted RBP4.97□□□□□ -1.61
COPA-203ENST00000481040 A0A1B0GWJ7 208 aa4.97□□□□□ -1.61
COPA-203ENST00000481040 GAPDHSO14556 408 aaPredicted RBP4.97□□□□□ -1.61
COPA-203ENST00000481040 CLDN3O15551 220 aa4.97□□□□□ -1.61
COPA-203ENST00000481040 PSMD3O43242 534 aa4.97□□□□□ -1.61
COPA-203ENST00000481040 RNASEH1O60930 286 aaKnown RBP4.97□□□□□ -1.61
COPA-203ENST00000481040 PALMO75781 387 aa4.97□□□□□ -1.61
COPA-203ENST00000481040 GAGE7O76087 117 aa4.97□□□□□ -1.61
COPA-203ENST00000481040 GAS8O95995 478 aa4.97□□□□□ -1.61
COPA-203ENST00000481040 OPN1MWP04001 364 aa4.97□□□□□ -1.61
COPA-203ENST00000481040 KRT6BP04259 564 aa4.97□□□□□ -1.61
COPA-203ENST00000481040 KRT19P08727 400 aa4.97□□□□□ -1.61
COPA-203ENST00000481040 GAGE12FP0CL80 117 aa4.97□□□□□ -1.61
COPA-203ENST00000481040 GAGE12GP0CL81 117 aa4.97□□□□□ -1.61
COPA-203ENST00000481040 GAGE12IP0CL82 117 aa4.97□□□□□ -1.61
COPA-203ENST00000481040 OPN1MW2P0DN77 364 aa4.97□□□□□ -1.61
COPA-203ENST00000481040 OPN1MW3P0DN78 364 aa4.97□□□□□ -1.61
COPA-203ENST00000481040 POLR2CP19387 275 aaPredicted RBP4.97□□□□□ -1.61
COPA-203ENST00000481040 C21orf33P30042 268 aaPredicted RBP4.97□□□□□ -1.61
COPA-203ENST00000481040 HSPA1LP34931 641 aa4.97□□□□□ -1.61
COPA-203ENST00000481040 SOX6P35712 828 aa4.97□□□□□ -1.61
COPA-203ENST00000481040 GDF5P43026 501 aa4.97□□□□□ -1.61
COPA-203ENST00000481040 NKX2-1P43699 371 aaPredicted RBP4.97□□□□□ -1.61
COPA-203ENST00000481040 KRT6CP48668 564 aa4.97□□□□□ -1.61
COPA-203ENST00000481040 FMO5P49326 533 aa4.97□□□□□ -1.61
COPA-203ENST00000481040 ACTR1AP61163 376 aa4.97□□□□□ -1.61
COPA-203ENST00000481040 IRX4P78413 519 aa4.97□□□□□ -1.61
COPA-203ENST00000481040 CX3CL1P78423 397 aa4.97□□□□□ -1.61
COPA-203ENST00000481040 DMPKQ09013 629 aa4.97□□□□□ -1.61
COPA-203ENST00000481040 CETN1Q12798 172 aa4.97□□□□□ -1.61
COPA-203ENST00000481040 GAGE1Q13065 139 aa4.97□□□□□ -1.61
COPA-203ENST00000481040 GAGE4Q13068 117 aa4.97□□□□□ -1.61
COPA-203ENST00000481040 PDZK1IP1Q13113 114 aa4.97□□□□□ -1.61
COPA-203ENST00000481040 GIT2Q14161 759 aa4.97□□□□□ -1.61
COPA-203ENST00000481040 MANEAQ5SRI9 462 aa4.97□□□□□ -1.61
COPA-203ENST00000481040 CYP4A22Q5TCH4 519 aa4.97□□□□□ -1.61
COPA-203ENST00000481040 LYSMD4Q5XG99 296 aa4.97□□□□□ -1.61
COPA-203ENST00000481040 RAD9BQ6WBX8 426 aa4.97□□□□□ -1.61
COPA-203ENST00000481040 CCNI2Q6ZMN8 369 aaPredicted RBP4.97□□□□□ -1.61
COPA-203ENST00000481040 UNC5CLQ8IV45 518 aa4.97□□□□□ -1.61
COPA-203ENST00000481040 MMD2Q8IY49 270 aa4.97□□□□□ -1.61
COPA-203ENST00000481040 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.97□□□□□ -1.61
COPA-203ENST00000481040 THEM5Q8N1Q8 247 aa4.97□□□□□ -1.61
COPA-203ENST00000481040 BANPQ8N9N5 519 aa4.97□□□□□ -1.61
COPA-203ENST00000481040 CCDC63Q8NA47 563 aa4.97□□□□□ -1.61
COPA-203ENST00000481040 LEMD2Q8NC56 503 aa4.97□□□□□ -1.61
COPA-203ENST00000481040 OR56B1Q8NGI3 324 aa4.97□□□□□ -1.61
COPA-203ENST00000481040 OR4A16Q8NH70 328 aa4.97□□□□□ -1.61
COPA-203ENST00000481040 SAP25Q8TEE9 199 aa4.97□□□□□ -1.61
COPA-203ENST00000481040 TMEM255BQ8WV15 326 aa4.97□□□□□ -1.61
COPA-203ENST00000481040 SLC5A11Q8WWX8 675 aa4.97□□□□□ -1.61
COPA-203ENST00000481040 IRGQQ8WZA9 623 aa4.97□□□□□ -1.61
COPA-203ENST00000481040 PIGBQ92521 554 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms