RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 ZNF74Q16587 644 aa4.42□□□□□ -1.7
CALD1-219ENST00000480638 LPAL2Q16609 132 aa4.42□□□□□ -1.7
CALD1-219ENST00000480638 WLSQ5T9L3 541 aa4.42□□□□□ -1.7
CALD1-219ENST00000480638 TRIM65Q6PJ69 517 aa4.42□□□□□ -1.7
CALD1-219ENST00000480638 MFN1Q8IWA4 741 aa4.42□□□□□ -1.7
CALD1-219ENST00000480638 ZNF440Q8IYI8 595 aa4.42□□□□□ -1.7
CALD1-219ENST00000480638 ZNRF4Q8WWF5 429 aa4.42□□□□□ -1.7
CALD1-219ENST00000480638 PROX1Q92786 737 aa4.42□□□□□ -1.7
CALD1-219ENST00000480638 RMDN1Q96DB5 314 aa4.42□□□□□ -1.7
CALD1-219ENST00000480638 ZNF486Q96H40 463 aaPredicted RBP4.42□□□□□ -1.7
CALD1-219ENST00000480638 ATOH8Q96SQ7 321 aa4.42□□□□□ -1.7
CALD1-219ENST00000480638 IWS1Q96ST2 819 aa4.42□□□□□ -1.7
CALD1-219ENST00000480638 VGLL1Q99990 258 aa4.42□□□□□ -1.7
CALD1-219ENST00000480638 ANKRD2Q9GZV1 360 aa4.42□□□□□ -1.7
CALD1-219ENST00000480638 RABEP2Q9H5N1 569 aa4.42□□□□□ -1.7
CALD1-219ENST00000480638 DNAJC4Q9NNZ3 241 aa4.42□□□□□ -1.7
CALD1-219ENST00000480638 CHKBQ9Y259 395 aa4.42□□□□□ -1.7
CALD1-219ENST00000480638 SNX3O60493 162 aa4.41□□□□□ -1.7
CALD1-219ENST00000480638 SORBS2O94875 1100 aaKnown RBP4.41□□□□□ -1.7
CALD1-219ENST00000480638 GSRP00390 522 aa4.41□□□□□ -1.7
CALD1-219ENST00000480638 DNA2P51530 1060 aa4.41□□□□□ -1.7
CALD1-219ENST00000480638 UBASH3AP57075 661 aa4.41□□□□□ -1.7
CALD1-219ENST00000480638 TRAP1Q12931 704 aaKnown RBP4.41□□□□□ -1.7
CALD1-219ENST00000480638 GPR33Q49SQ1 333 aa4.41□□□□□ -1.7
CALD1-219ENST00000480638 KRBOX4Q5JUW0 171 aa4.41□□□□□ -1.7
CALD1-219ENST00000480638 LEKR1Q6ZMV7 388 aa4.41□□□□□ -1.7
CALD1-219ENST00000480638 OR8H2Q8N162 312 aa4.41□□□□□ -1.7
CALD1-219ENST00000480638 NOA1Q8NC60 698 aaKnown RBP4.41□□□□□ -1.7
CALD1-219ENST00000480638 SLC37A3Q8NCC5 494 aa4.41□□□□□ -1.7
CALD1-219ENST00000480638 OR6S1Q8NH40 331 aa4.41□□□□□ -1.7
CALD1-219ENST00000480638 ZNF519Q8TB69 540 aa4.41□□□□□ -1.7
CALD1-219ENST00000480638 MAPK15Q8TD08 544 aa4.41□□□□□ -1.7
CALD1-219ENST00000480638 KCNE4Q8WWG9 221 aa4.41□□□□□ -1.7
CALD1-219ENST00000480638 SLCO2A1Q92959 643 aa4.41□□□□□ -1.7
CALD1-219ENST00000480638 CENPTQ96BT3 561 aa4.41□□□□□ -1.7
CALD1-219ENST00000480638 ZNF558Q96NG5 402 aa4.41□□□□□ -1.7
CALD1-219ENST00000480638 NKX3-1Q99801 234 aaPredicted RBP4.41□□□□□ -1.7
CALD1-219ENST00000480638 RBM4BQ9BQ04 359 aaKnown RBP4.41□□□□□ -1.7
CALD1-219ENST00000480638 CABLES2Q9BTV7 478 aa4.41□□□□□ -1.7
CALD1-219ENST00000480638 GSN-AS1Q9NRJ2 163 aa4.41□□□□□ -1.7
CALD1-219ENST00000480638 TXNDC16Q9P2K2 825 aa4.41□□□□□ -1.7
CALD1-219ENST00000480638 MYH15Q9Y2K3 1946 aa4.4□□□□□ -1.7
CALD1-219ENST00000480638 TRAV24A0A0B4J272 114 aa4.4□□□□□ -1.71
CALD1-219ENST00000480638 TRBV5-5A0A0J9YX44 114 aa4.4□□□□□ -1.71
CALD1-219ENST00000480638 MEX3AA1L020 520 aaKnown RBP4.4□□□□□ -1.71
CALD1-219ENST00000480638 SNURFLB1AK76 121 aa4.4□□□□□ -1.71
CALD1-219ENST00000480638 C2CD4DB7Z1M9 353 aa4.4□□□□□ -1.71
CALD1-219ENST00000480638 TEX28O15482 410 aa4.4□□□□□ -1.71
CALD1-219ENST00000480638 PLOD3O60568 738 aa4.4□□□□□ -1.71
CALD1-219ENST00000480638 TBX10O75333 385 aa4.4□□□□□ -1.71
CALD1-219ENST00000480638 CRLF1O75462 422 aa4.4□□□□□ -1.71
CALD1-219ENST00000480638 KRT33AO76009 404 aa4.4□□□□□ -1.71
CALD1-219ENST00000480638 ATP1B1P05026 303 aa4.4□□□□□ -1.71
CALD1-219ENST00000480638 ZSCAN5DPP0CG00 497 aa4.4□□□□□ -1.71
CALD1-219ENST00000480638 TRIM49P0CI25 452 aa4.4□□□□□ -1.71
CALD1-219ENST00000480638 TRIM49CP0CI26 452 aa4.4□□□□□ -1.71
CALD1-219ENST00000480638 EEF1DP29692 281 aaKnown RBP4.4□□□□□ -1.71
CALD1-219ENST00000480638 GSCP56915 257 aaPredicted RBP4.4□□□□□ -1.71
CALD1-219ENST00000480638 MYL7Q01449 175 aa4.4□□□□□ -1.71
CALD1-219ENST00000480638 EFTUD2Q15029 972 aaKnown RBP eCLIP4.4□□□□□ -1.71
CALD1-219ENST00000480638 FASTKD1Q53R41 847 aaKnown RBP4.4□□□□□ -1.71
CALD1-219ENST00000480638 TCP11X2Q5H9J9 407 aa4.4□□□□□ -1.71
CALD1-219ENST00000480638 LYSMD4Q5XG99 296 aa4.4□□□□□ -1.71
CALD1-219ENST00000480638 GTSCR1Q86UQ5 136 aa4.4□□□□□ -1.71
CALD1-219ENST00000480638 ANKRD13CQ8N6S4 541 aa4.4□□□□□ -1.71
CALD1-219ENST00000480638 CCDC89Q8N998 374 aa4.4□□□□□ -1.71
CALD1-219ENST00000480638 CAMKVQ8NCB2 501 aa4.4□□□□□ -1.71
CALD1-219ENST00000480638 OR7A2PQ8NGA2 310 aa4.4□□□□□ -1.71
CALD1-219ENST00000480638 MRPS27Q92552 414 aaKnown RBP4.4□□□□□ -1.71
CALD1-219ENST00000480638 AGAP3Q96P47 875 aa4.4□□□□□ -1.71
CALD1-219ENST00000480638 LPAR4Q99677 370 aa4.4□□□□□ -1.71
CALD1-219ENST00000480638 SPHK2Q9NRA0 654 aa4.4□□□□□ -1.71
CALD1-219ENST00000480638 PANK4Q9NVE7 773 aa4.4□□□□□ -1.71
CALD1-219ENST00000480638 CLIC5Q9NZA1 410 aa4.4□□□□□ -1.71
CALD1-219ENST00000480638 PAK5Q9P286 719 aa4.4□□□□□ -1.71
CALD1-219ENST00000480638 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.4□□□□□ -1.71
CALD1-219ENST00000480638 KAT6BQ8WYB5 2073 aa4.4□□□□□ -1.71
CALD1-219ENST00000480638 A0A087WUV0 522 aaPredicted RBP4.39□□□□□ -1.71
CALD1-219ENST00000480638 H0YAE9 185 aa4.39□□□□□ -1.71
CALD1-219ENST00000480638 CCL24O00175 119 aa4.39□□□□□ -1.71
CALD1-219ENST00000480638 RPS6KA5O75582 802 aa4.39□□□□□ -1.71
CALD1-219ENST00000480638 BAG3O95817 575 aa4.39□□□□□ -1.71
CALD1-219ENST00000480638 HSPA4P34932 840 aa4.39□□□□□ -1.71
CALD1-219ENST00000480638 TAF6P49848 677 aa4.39□□□□□ -1.71
CALD1-219ENST00000480638 HUNKP57058 714 aa4.39□□□□□ -1.71
CALD1-219ENST00000480638 DLK1P80370 383 aa4.39□□□□□ -1.71
CALD1-219ENST00000480638 RASGEF1BQ0VAM2 473 aa4.39□□□□□ -1.71
CALD1-219ENST00000480638 COG2Q14746 738 aa4.39□□□□□ -1.71
CALD1-219ENST00000480638 TMED8Q6PL24 325 aaPredicted RBP4.39□□□□□ -1.71
CALD1-219ENST00000480638 METTL7BQ6UX53 244 aa4.39□□□□□ -1.71
CALD1-219ENST00000480638 LRRTM1Q86UE6 522 aa4.39□□□□□ -1.71
CALD1-219ENST00000480638 CCDC191Q8NCU4 936 aa4.39□□□□□ -1.71
CALD1-219ENST00000480638 VPS33AQ96AX1 596 aa4.39□□□□□ -1.71
CALD1-219ENST00000480638 SPAG5Q96R06 1193 aa4.39□□□□□ -1.71
CALD1-219ENST00000480638 PKP2Q99959 881 aa4.39□□□□□ -1.71
CALD1-219ENST00000480638 SLC25A23Q9BV35 468 aa4.39□□□□□ -1.71
CALD1-219ENST00000480638 WWTR1Q9GZV5 400 aa4.39□□□□□ -1.71
CALD1-219ENST00000480638 FZD8Q9H461 694 aa4.39□□□□□ -1.71
CALD1-219ENST00000480638 ST6GALNAC4Q9H4F1 302 aa4.39□□□□□ -1.71
CALD1-219ENST00000480638 CCL27Q9Y4X3 112 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms