RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 ATP13A4Q4VNC1 1196 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 TDRD12Q587J7 1177 aaKnown RBP4.46□□□□□ -1.7
CKS1B-207ENST00000477676 ZNF362Q5T0B9 420 aaPredicted RBP4.46□□□□□ -1.7
CKS1B-207ENST00000477676 MARC1Q5VT66 337 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 CACHD1Q5VU97 1274 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 ARMC6Q6NXE6 501 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 JMJD6Q6NYC1 403 aaPredicted RBP4.46□□□□□ -1.7
CKS1B-207ENST00000477676 FBXO38Q6PIJ6 1188 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 FAM83HQ6ZRV2 1179 aaPredicted RBP4.46□□□□□ -1.7
CKS1B-207ENST00000477676 FAM92BQ6ZTR7 304 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 ESPNLQ6ZVH7 1005 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 DOK3Q7L591 496 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 ZNF571Q7Z3V5 609 aaPredicted RBP4.46□□□□□ -1.7
CKS1B-207ENST00000477676 PRSS42Q7Z5A4 293 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 SLC9B2Q86UD5 537 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 PLXDC1Q8IUK5 500 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 PSTKQ8IV42 348 aaKnown RBP4.46□□□□□ -1.7
CKS1B-207ENST00000477676 RASGRP3Q8IV61 690 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 SRRM1Q8IYB3 904 aaKnown RBP4.46□□□□□ -1.7
CKS1B-207ENST00000477676 AOPEPQ8N6M6 819 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 PAF1Q8N7H5 531 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 CNTD1Q8N815 330 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 GPR26Q8NDV2 337 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 FDCSPQ8NFU4 85 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 EXD1Q8NHP7 514 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 FAM71BQ8TC56 605 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 SLC9A6Q92581 669 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 HSPH1Q92598 858 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 STAMBPL1Q96FJ0 436 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 SLC41A2Q96JW4 573 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 ERGIC2Q96RQ1 377 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 TRIB3Q96RU7 358 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 LYSMD1Q96S90 227 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 EIF3CQ99613 913 aaKnown RBP4.46□□□□□ -1.7
CKS1B-207ENST00000477676 NDC1Q9BTX1 674 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 SLC25A23Q9BV35 468 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 TDRD1Q9BXT4 1180 aaKnown RBP4.46□□□□□ -1.7
CKS1B-207ENST00000477676 CARD9Q9H257 536 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 CHST8Q9H2A9 424 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 SLC40A1Q9NP59 571 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 KLC4Q9NSK0 619 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 PARVAQ9NVD7 372 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 EPHA6Q9UF33 1036 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 LIMA1Q9UHB6 759 aaKnown RBP4.46□□□□□ -1.7
CKS1B-207ENST00000477676 PADI1Q9ULC6 663 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 VPS4AQ9UN37 437 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 DNAJC16Q9Y2G8 782 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 PCDHGA9Q9Y5G4 932 aaKnown RBP4.46□□□□□ -1.7
CKS1B-207ENST00000477676 DNAJC13O75165 2243 aa4.46□□□□□ -1.7
CKS1B-207ENST00000477676 ANK3Q12955 4377 aaKnown RBP4.45□□□□□ -1.7
CKS1B-207ENST00000477676 C1orf232A0A0U1RR37 186 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 GRID2IPA4D2P6 1211 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 OR5K4A6NMS3 321 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 ENO4A6NNW6 628 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 C21orf140B9A014 251 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 TOX3O15405 576 aaPredicted RBP4.45□□□□□ -1.7
CKS1B-207ENST00000477676 GPR39O43194 453 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 RASSF9O75901 435 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 KRT38O76015 456 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 LCA5LO95447 670 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 FTLP02792 175 aaPredicted RBP4.45□□□□□ -1.7
CKS1B-207ENST00000477676 GAAP10253 952 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 ATP1A3P13637 1013 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 ZNF7P17097 686 aaPredicted RBP4.45□□□□□ -1.7
CKS1B-207ENST00000477676 BPIP17213 487 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 AMD1P17707 334 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 LPOP22079 712 aaPredicted RBP4.45□□□□□ -1.7
CKS1B-207ENST00000477676 PTX3P26022 381 aaPredicted RBP4.45□□□□□ -1.7
CKS1B-207ENST00000477676 TNFRSF8P28908 595 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 PTPN4P29074 926 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 CASP14P31944 242 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 PCK1P35558 622 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 GZMKP49863 264 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 DRG2P55039 364 aaKnown RBP4.45□□□□□ -1.7
CKS1B-207ENST00000477676 CDH6P55285 790 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 FOXL2P58012 376 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 OCRLQ01968 901 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 GALNT2Q10471 571 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 ABRQ12979 859 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 PEX6Q13608 980 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 RAPSNQ13702 412 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 GALNT3Q14435 633 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 MYBPC3Q14896 1274 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 SEPT7Q16181 437 aaKnown RBP4.45□□□□□ -1.7
CKS1B-207ENST00000477676 ZNF789Q5FWF6 425 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 PLEKHS1Q5SXH7 462 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 ALS2CLQ60I27 953 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 NCBP2-AS2Q69YL0 99 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 IRGCQ6NXR0 463 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 FAM198BQ6UWH4 519 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 TMCO3Q6UWJ1 677 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 ABRAXAS1Q6UWZ7 409 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 MICALCLQ6ZW33 695 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 KIF18BQ86Y91 864 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 ATPAF2Q8N5M1 289 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 ZBTB2Q8N680 514 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 PQLC3Q8N755 202 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 LPCAT1Q8NF37 534 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 NEK11Q8NG66 645 aa4.45□□□□□ -1.7
CKS1B-207ENST00000477676 NAT14Q8WUY8 206 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms