RNA–Protein interactions for RNA: ENST00000477087.1

CDKN1B-204, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3

Gene CDKN1B, Length 453 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-204ENST00000477087 ZNF30P17039 623 aa5.72□□□□□ -1.49
CDKN1B-204ENST00000477087 GABRB3P28472 473 aa5.72□□□□□ -1.49
CDKN1B-204ENST00000477087 SERPINA4P29622 427 aa5.72□□□□□ -1.49
CDKN1B-204ENST00000477087 PPARGP37231 505 aaPredicted RBP5.72□□□□□ -1.49
CDKN1B-204ENST00000477087 SKIV2L2P42285 1042 aaKnown RBP5.72□□□□□ -1.49
CDKN1B-204ENST00000477087 TNFRSF4P43489 277 aa5.72□□□□□ -1.49
CDKN1B-204ENST00000477087 CD151P48509 253 aa5.72□□□□□ -1.49
CDKN1B-204ENST00000477087 CLCN5P51795 746 aa5.72□□□□□ -1.49
CDKN1B-204ENST00000477087 NEK3P51956 506 aa5.72□□□□□ -1.49
CDKN1B-204ENST00000477087 ZNF140P52738 457 aaPredicted RBP5.72□□□□□ -1.49
CDKN1B-204ENST00000477087 SOX8P57073 446 aa5.72□□□□□ -1.49
CDKN1B-204ENST00000477087 NAA20P61599 178 aa5.72□□□□□ -1.49
CDKN1B-204ENST00000477087 NKX6-1P78426 367 aaPredicted RBP5.72□□□□□ -1.49
CDKN1B-204ENST00000477087 TRAF2Q12933 501 aa5.72□□□□□ -1.49
CDKN1B-204ENST00000477087 RUNX3Q13761 415 aa5.72□□□□□ -1.49
CDKN1B-204ENST00000477087 THOC5Q13769 683 aaKnown RBP5.72□□□□□ -1.49
CDKN1B-204ENST00000477087 POU6F1Q14863 301 aa5.72□□□□□ -1.49
CDKN1B-204ENST00000477087 DLG2Q15700 870 aa5.72□□□□□ -1.49
CDKN1B-204ENST00000477087 CCDC153Q494R4 210 aa5.72□□□□□ -1.49
CDKN1B-204ENST00000477087 FUT11Q495W5 492 aa5.72□□□□□ -1.49
CDKN1B-204ENST00000477087 AARS2Q5JTZ9 985 aaKnown RBP5.72□□□□□ -1.49
CDKN1B-204ENST00000477087 LYPLAL1Q5VWZ2 237 aa5.72□□□□□ -1.49
CDKN1B-204ENST00000477087 ICE2Q659A1 982 aa5.72□□□□□ -1.49
CDKN1B-204ENST00000477087 TMEM215Q68D42 235 aa5.72□□□□□ -1.49
CDKN1B-204ENST00000477087 TANGO2Q6ICL3 276 aa5.72□□□□□ -1.49
CDKN1B-204ENST00000477087 TPGS1Q6ZTW0 290 aa5.72□□□□□ -1.49
CDKN1B-204ENST00000477087 TPRG1Q6ZUI0 275 aa5.72□□□□□ -1.49
CDKN1B-204ENST00000477087 STK40Q8N2I9 435 aa5.72□□□□□ -1.49
CDKN1B-204ENST00000477087 TTC30BQ8N4P2 665 aa5.72□□□□□ -1.49
CDKN1B-204ENST00000477087 C12orf76Q8N812 135 aaPredicted RBP5.72□□□□□ -1.49
CDKN1B-204ENST00000477087 OR2A12Q8NGT7 310 aa5.72□□□□□ -1.49
CDKN1B-204ENST00000477087 OR6Y1Q8NGX8 325 aa5.72□□□□□ -1.49
CDKN1B-204ENST00000477087 OR4L1Q8NH43 312 aa5.72□□□□□ -1.49
CDKN1B-204ENST00000477087 RDH11Q8TC12 318 aa5.72□□□□□ -1.49
CDKN1B-204ENST00000477087 UCMAQ8WVF2 138 aa5.72□□□□□ -1.49
CDKN1B-204ENST00000477087 RMDN1Q96DB5 314 aa5.72□□□□□ -1.49
CDKN1B-204ENST00000477087 MSANTD3Q96H12 275 aa5.72□□□□□ -1.49
CDKN1B-204ENST00000477087 PDLIM5Q96HC4 596 aaKnown RBP5.72□□□□□ -1.49
CDKN1B-204ENST00000477087 APOPT1Q96IL0 206 aa5.72□□□□□ -1.49
CDKN1B-204ENST00000477087 UBXN10Q96LJ8 280 aa5.72□□□□□ -1.49
CDKN1B-204ENST00000477087 ZNF778Q96MU6 729 aa5.72□□□□□ -1.49
CDKN1B-204ENST00000477087 MOGAT1Q96PD6 335 aa5.72□□□□□ -1.49
CDKN1B-204ENST00000477087 SLC29A3Q9BZD2 475 aa5.72□□□□□ -1.49
CDKN1B-204ENST00000477087 SERTAD4Q9NUC0 356 aa5.72□□□□□ -1.49
CDKN1B-204ENST00000477087 TBK1Q9UHD2 729 aa5.72□□□□□ -1.49
CDKN1B-204ENST00000477087 MID2Q9UJV3 735 aa5.72□□□□□ -1.49
CDKN1B-204ENST00000477087 PLA2G4CQ9UP65 541 aa5.72□□□□□ -1.49
CDKN1B-204ENST00000477087 ERVW-1Q9UQF0 538 aa5.72□□□□□ -1.49
CDKN1B-204ENST00000477087 NUP205Q92621 2012 aa5.72□□□□□ -1.49
CDKN1B-204ENST00000477087 DOCK4Q8N1I0 1966 aa5.71□□□□□ -1.49
CDKN1B-204ENST00000477087 TRBV5-4A0A0C4DH59 114 aa5.71□□□□□ -1.5
CDKN1B-204ENST00000477087 NEDD8-MDP1E9PL57 170 aa5.71□□□□□ -1.5
CDKN1B-204ENST00000477087 K7ERQ8 282 aa5.71□□□□□ -1.5
CDKN1B-204ENST00000477087 COPEO14579 308 aa5.71□□□□□ -1.5
CDKN1B-204ENST00000477087 PPM1DO15297 605 aa5.71□□□□□ -1.5
CDKN1B-204ENST00000477087 CD3EAPO15446 510 aaKnown RBP5.71□□□□□ -1.5
CDKN1B-204ENST00000477087 C2P06681 752 aa5.71□□□□□ -1.5
CDKN1B-204ENST00000477087 PDHA1P08559 390 aa5.71□□□□□ -1.5
CDKN1B-204ENST00000477087 CREB1P16220 341 aa5.71□□□□□ -1.5
CDKN1B-204ENST00000477087 RPS3P23396 243 aaKnown RBP eCLIP5.71□□□□□ -1.56e-12■■■■□ 19.6
CDKN1B-204ENST00000477087 TYK2P29597 1187 aa5.71□□□□□ -1.5
CDKN1B-204ENST00000477087 HPDP32754 393 aaPredicted RBP5.71□□□□□ -1.5
CDKN1B-204ENST00000477087 VIPR2P41587 438 aa5.71□□□□□ -1.5
CDKN1B-204ENST00000477087 PTGER3P43115 390 aa5.71□□□□□ -1.5
CDKN1B-204ENST00000477087 TTPAP49638 278 aa5.71□□□□□ -1.5
CDKN1B-204ENST00000477087 SERPINB8P50452 374 aa5.71□□□□□ -1.5
CDKN1B-204ENST00000477087 LOXL3P58215 753 aa5.71□□□□□ -1.5
CDKN1B-204ENST00000477087 ST8SIA6P61647 398 aa5.71□□□□□ -1.5
CDKN1B-204ENST00000477087 GNGT1P63211 74 aa5.71□□□□□ -1.5
CDKN1B-204ENST00000477087 PRAMEP78395 509 aa5.71□□□□□ -1.5
CDKN1B-204ENST00000477087 CRADDP78560 199 aa5.71□□□□□ -1.5
CDKN1B-204ENST00000477087 XIAPP98170 497 aa5.71□□□□□ -1.5
CDKN1B-204ENST00000477087 SATB1Q01826 763 aa5.71□□□□□ -1.5
CDKN1B-204ENST00000477087 CCDC15Q0P6D6 951 aa5.71□□□□□ -1.5
CDKN1B-204ENST00000477087 OLIG2Q13516 323 aa5.71□□□□□ -1.5
CDKN1B-204ENST00000477087 BOP1Q14137 746 aaKnown RBP5.71□□□□□ -1.5
CDKN1B-204ENST00000477087 ITIH4Q14624 930 aa5.71□□□□□ -1.5
CDKN1B-204ENST00000477087 TMED2Q15363 201 aa5.71□□□□□ -1.5
CDKN1B-204ENST00000477087 PDK4Q16654 411 aa5.71□□□□□ -1.5
CDKN1B-204ENST00000477087 HNRNPA1L2Q32P51 320 aaKnown RBP5.71□□□□□ -1.5
CDKN1B-204ENST00000477087 ITPRIPL2Q3MIP1 535 aa5.71□□□□□ -1.5
CDKN1B-204ENST00000477087 KHDC1LQ5JSQ8 128 aa5.71□□□□□ -1.5
CDKN1B-204ENST00000477087 RARS2Q5T160 578 aaKnown RBP5.71□□□□□ -1.5
CDKN1B-204ENST00000477087 SYCP2LQ5T4T6 812 aa5.71□□□□□ -1.5
CDKN1B-204ENST00000477087 C22orf39Q6P5X5 142 aa5.71□□□□□ -1.5
CDKN1B-204ENST00000477087 AFTPHQ6ULP2 937 aa5.71□□□□□ -1.5
CDKN1B-204ENST00000477087 VITQ6UXI7 678 aa5.71□□□□□ -1.5
CDKN1B-204ENST00000477087 GDPD4Q6W3E5 623 aa5.71□□□□□ -1.5
CDKN1B-204ENST00000477087 LEKR1Q6ZMV7 388 aa5.71□□□□□ -1.5
CDKN1B-204ENST00000477087 DPY19L3Q6ZPD9 716 aa5.71□□□□□ -1.5
CDKN1B-204ENST00000477087 CAMK1DQ8IU85 385 aa5.71□□□□□ -1.5
CDKN1B-204ENST00000477087 KIRREL3Q8IZU9 778 aa5.71□□□□□ -1.5
CDKN1B-204ENST00000477087 SLC25A41Q8N5S1 370 aa5.71□□□□□ -1.5
CDKN1B-204ENST00000477087 SMRP1Q8NCR6 262 aa5.71□□□□□ -1.5
CDKN1B-204ENST00000477087 ZNF398Q8TD17 642 aa5.71□□□□□ -1.5
CDKN1B-204ENST00000477087 TCP10LQ8TDR4 215 aa5.71□□□□□ -1.5
CDKN1B-204ENST00000477087 GDPD5Q8WTR4 605 aa5.71□□□□□ -1.5
CDKN1B-204ENST00000477087 HEXDCQ8WVB3 486 aa5.71□□□□□ -1.5
CDKN1B-204ENST00000477087 RAB7BQ96AH8 199 aa5.71□□□□□ -1.5
CDKN1B-204ENST00000477087 FAM131CQ96AQ9 280 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms