RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 CES3Q6UWW8 571 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 LRRC8DQ7L1W4 858 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 HAUS6Q7Z4H7 955 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 KLHL7Q8IXQ5 586 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 AGGF1Q8N302 714 aaeCLIP4.74□□□□□ -1.65
NPHP3-206ENST00000474871 METTL4Q8N3J2 472 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 UBL4BQ8N7F7 174 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 OR8K5Q8NH50 307 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 TFAP2BQ92481 460 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 ISOC1Q96CN7 298 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 FCRL2Q96LA5 508 aaPredicted RBP4.74□□□□□ -1.65
NPHP3-206ENST00000474871 TRNT1Q96Q11 434 aaKnown RBP4.74□□□□□ -1.65
NPHP3-206ENST00000474871 P2RY13Q9BPV8 354 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 YTHDF1Q9BYJ9 559 aaKnown RBP4.74□□□□□ -1.65
NPHP3-206ENST00000474871 EPB41L4BQ9H329 900 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 FBXO44Q9H4M3 255 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 MAGEF1Q9HAY2 307 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 BIN3Q9NQY0 253 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 AGPAT5Q9NUQ2 364 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 RAB20Q9NX57 234 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 TREM2Q9NZC2 230 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 SH3BP4Q9P0V3 963 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 CNTN6Q9UQ52 1028 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 CLIC4Q9Y696 253 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 SLX4Q8IY92 1834 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 MYOCOSA0A1B0GUC4 107 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 H3BMM5 538 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 BCAT2O15382 392 aaPredicted RBP4.74□□□□□ -1.65
NPHP3-206ENST00000474871 IFNA2P01563 188 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 PSMC3P17980 439 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 XRCC1P18887 633 aaPredicted RBP4.74□□□□□ -1.65
NPHP3-206ENST00000474871 NUP62P37198 522 aaPredicted RBP4.74□□□□□ -1.65
NPHP3-206ENST00000474871 NNMTP40261 264 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 PSMB10P40306 273 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 DNA2P51530 1060 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 SKP1P63208 163 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 DSG1Q02413 1049 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 KCNH2Q12809 1159 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 ENPP2Q13822 863 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 VASNQ6EMK4 673 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 ELP2Q6IA86 826 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 TIGD7Q6NT04 549 aaPredicted RBP4.74□□□□□ -1.65
NPHP3-206ENST00000474871 USP17L2Q6R6M4 530 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 ARPINQ7Z6K5 226 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 PRPF39Q86UA1 669 aaKnown RBP4.74□□□□□ -1.65
NPHP3-206ENST00000474871 GRAMD1CQ8IYS0 662 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 CMTR1Q8N1G2 835 aaKnown RBP4.74□□□□□ -1.65
NPHP3-206ENST00000474871 EIF1ADQ8N9N8 165 aaKnown RBP4.74□□□□□ -1.65
NPHP3-206ENST00000474871 CLRN3Q8NCR9 226 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 ST7LQ8TDW4 575 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 RCC1LQ96I51 464 aaKnown RBP4.74□□□□□ -1.65
NPHP3-206ENST00000474871 MRGPRX1Q96LB2 322 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 RAB3IPQ96QF0 476 aaPredicted RBP4.74□□□□□ -1.65
NPHP3-206ENST00000474871 HTATIP2Q9BUP3 242 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 KATNB1Q9BVA0 655 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 GGACTQ9BVM4 153 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 RUSC1Q9BVN2 902 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 LPAR2Q9HBW0 351 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 NT5MQ9NPB1 228 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 COL20A1Q9P218 1284 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 PPT2Q9UMR5 302 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 CLCA2Q9UQC9 943 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 WBP11Q9Y2W2 641 aaKnown RBP4.74□□□□□ -1.65
NPHP3-206ENST00000474871 KCNE2Q9Y6J6 123 aa4.74□□□□□ -1.65
NPHP3-206ENST00000474871 WDR81Q562E7 1941 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 MPTX1A8MV57 137 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 RBAK-RBAKDNI3L0D1 243 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 O00370 1275 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 USP12O75317 370 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 NADKO95544 446 aaPredicted RBP4.73□□□□□ -1.65
NPHP3-206ENST00000474871 MMP1P03956 469 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 GSNP06396 782 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 ZNF23P17027 643 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 MAGP20916 626 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 DCKP27707 260 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 HSD11B1P28845 292 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 CAPGP40121 348 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 CDKN2CP42773 168 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 SCAND1P57086 179 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 ZNF844Q08AG5 666 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 ALCAMQ13740 583 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 ACOX1Q15067 660 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 C5orf64Q2M2E5 130 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 C18orf63Q68DL7 685 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 RNF43Q68DV7 783 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 GALNT18Q6P9A2 607 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 RAD9BQ6WBX8 426 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 TIPARPQ7Z3E1 657 aaKnown RBP4.73□□□□□ -1.65
NPHP3-206ENST00000474871 KMT5CQ86Y97 462 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 PTOV1Q86YD1 416 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 CDK20Q8IZL9 346 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 HDDC3Q8N4P3 179 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.73□□□□□ -1.65
NPHP3-206ENST00000474871 LINC00301Q8NCQ3 95 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 GPRC5AQ8NFJ5 357 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 AP2M1Q96CW1 435 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 C18orf8Q96DM3 657 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 DYNLL2Q96FJ2 89 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 RHOVQ96L33 236 aa4.73□□□□□ -1.65
NPHP3-206ENST00000474871 INTS14Q96SY0 518 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms