RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 HIST1H2ADP20671 130 aa9.96□□□□□ -0.82
CASC3-204ENST00000474190 IMPDH1P20839 514 aa9.96□□□□□ -0.82
CASC3-204ENST00000474190 EEF1DP29692 281 aaKnown RBP9.96□□□□□ -0.82
CASC3-204ENST00000474190 ALDH3A1P30838 453 aa9.96□□□□□ -0.82
CASC3-204ENST00000474190 CASP2P42575 452 aa9.96□□□□□ -0.82
CASC3-204ENST00000474190 DNAJB13P59910 316 aa9.96□□□□□ -0.82
CASC3-204ENST00000474190 SH3BP2P78314 561 aa9.96□□□□□ -0.82
CASC3-204ENST00000474190 TRAF3Q13114 568 aa9.96□□□□□ -0.82
CASC3-204ENST00000474190 KCNAB1Q14722 419 aa9.96□□□□□ -0.82
CASC3-204ENST00000474190 CCDC153Q494R4 210 aa9.96□□□□□ -0.82
CASC3-204ENST00000474190 CCDC157Q569K6 752 aa9.96□□□□□ -0.82
CASC3-204ENST00000474190 PRAMEF13Q5VWM6 474 aa9.96□□□□□ -0.82
CASC3-204ENST00000474190 IRGCQ6NXR0 463 aa9.96□□□□□ -0.82
CASC3-204ENST00000474190 KLC3Q6P597 504 aa9.96□□□□□ -0.82
CASC3-204ENST00000474190 TTC23LQ6PF05 361 aa9.96□□□□□ -0.82
CASC3-204ENST00000474190 RBM44Q6ZP01 1051 aaKnown RBP9.96□□□□□ -0.82
CASC3-204ENST00000474190 FRA10AC1Q70Z53 315 aa9.96□□□□□ -0.82
CASC3-204ENST00000474190 TMPRSS7Q7RTY8 843 aa9.96□□□□□ -0.82
CASC3-204ENST00000474190 VN1R5Q7Z5H4 357 aa9.96□□□□□ -0.82
CASC3-204ENST00000474190 PLXDC1Q8IUK5 500 aa9.96□□□□□ -0.82
CASC3-204ENST00000474190 D2HGDHQ8N465 521 aa9.96□□□□□ -0.82
CASC3-204ENST00000474190 CHCHD4Q8N4Q1 142 aa9.96□□□□□ -0.82
CASC3-204ENST00000474190 ZNF740Q8NDX6 193 aa9.96□□□□□ -0.82
CASC3-204ENST00000474190 MDM1Q8TC05 714 aa9.96□□□□□ -0.82
CASC3-204ENST00000474190 ATL1Q8WXF7 558 aa9.96□□□□□ -0.82
CASC3-204ENST00000474190 MED8Q96G25 268 aa9.96□□□□□ -0.82
CASC3-204ENST00000474190 HIST1H2AHQ96KK5 128 aa9.96□□□□□ -0.82
CASC3-204ENST00000474190 CD180Q99467 661 aa9.96□□□□□ -0.82
CASC3-204ENST00000474190 HIST1H2AJQ99878 128 aa9.96□□□□□ -0.82
CASC3-204ENST00000474190 PLCD4Q9BRC7 762 aa9.96□□□□□ -0.82
CASC3-204ENST00000474190 H2AFJQ9BTM1 129 aa9.96□□□□□ -0.82
CASC3-204ENST00000474190 SARGQ9BW04 601 aa9.96□□□□□ -0.82
CASC3-204ENST00000474190 GATA5Q9BWX5 397 aaPredicted RBP9.96□□□□□ -0.82
CASC3-204ENST00000474190 TRIM54Q9BYV2 358 aa9.96□□□□□ -0.82
CASC3-204ENST00000474190 AICDAQ9GZX7 198 aa9.96□□□□□ -0.82
CASC3-204ENST00000474190 CCDC177Q9NQR7 707 aaPredicted RBP9.96□□□□□ -0.82
CASC3-204ENST00000474190 C1GALT1Q9NS00 363 aa9.96□□□□□ -0.82
CASC3-204ENST00000474190 OCIAD1Q9NX40 245 aa9.96□□□□□ -0.82
CASC3-204ENST00000474190 KLHL3Q9UH77 587 aa9.96□□□□□ -0.82
CASC3-204ENST00000474190 PCDHB11Q9Y5F2 797 aa9.96□□□□□ -0.82
CASC3-204ENST00000474190 UNC13CQ8NB66 2214 aa9.95□□□□□ -0.82
CASC3-204ENST00000474190 GSAPA4D1B5 854 aa9.95□□□□□ -0.82
CASC3-204ENST00000474190 ISM1B1AKI9 464 aa9.95□□□□□ -0.82
CASC3-204ENST00000474190 H7BY64 318 aa9.95□□□□□ -0.82
CASC3-204ENST00000474190 K7EPI3 171 aa9.95□□□□□ -0.82
CASC3-204ENST00000474190 MATN2O00339 956 aa9.95□□□□□ -0.82
CASC3-204ENST00000474190 HAT1O14929 419 aa9.95□□□□□ -0.82
CASC3-204ENST00000474190 LCMT2O60294 686 aaKnown RBP9.95□□□□□ -0.82
CASC3-204ENST00000474190 WDR47O94967 919 aa9.95□□□□□ -0.82
CASC3-204ENST00000474190 MED26O95402 600 aa9.95□□□□□ -0.82
CASC3-204ENST00000474190 CDH1P12830 882 aa9.95□□□□□ -0.82
CASC3-204ENST00000474190 CCL4P13236 92 aa9.95□□□□□ -0.82
CASC3-204ENST00000474190 CPA3P15088 417 aa9.95□□□□□ -0.82
CASC3-204ENST00000474190 TSPAN8P19075 237 aa9.95□□□□□ -0.82
CASC3-204ENST00000474190 VARSP26640 1264 aaKnown RBP9.95□□□□□ -0.82
CASC3-204ENST00000474190 ETV5P41161 510 aa9.95□□□□□ -0.82
CASC3-204ENST00000474190 SERPINB4P48594 390 aa9.95□□□□□ -0.82
CASC3-204ENST00000474190 CDH13P55290 713 aa9.95□□□□□ -0.82
CASC3-204ENST00000474190 HERVK_113P63132 956 aa9.95□□□□□ -0.82
CASC3-204ENST00000474190 SHC2P98077 582 aa9.95□□□□□ -0.82
CASC3-204ENST00000474190 TARDBPQ13148 414 aaKnown RBP eCLIP9.95□□□□□ -0.82
CASC3-204ENST00000474190 BIRC2Q13490 618 aa9.95□□□□□ -0.82
CASC3-204ENST00000474190 SPIDRQ14159 915 aa9.95□□□□□ -0.82
CASC3-204ENST00000474190 CACHD1Q5VU97 1274 aa9.95□□□□□ -0.82
CASC3-204ENST00000474190 ADNP2Q6IQ32 1131 aa9.95□□□□□ -0.82
CASC3-204ENST00000474190 CAPN13Q6MZZ7 669 aaPredicted RBP9.95□□□□□ -0.82
CASC3-204ENST00000474190 METTL2BQ6P1Q9 378 aaKnown RBP9.95□□□□□ -0.82
CASC3-204ENST00000474190 KLHL35Q6PF15 583 aa9.95□□□□□ -0.82
CASC3-204ENST00000474190 FIGLAQ6QHK4 219 aa9.95□□□□□ -0.82
CASC3-204ENST00000474190 RNF44Q7L0R7 432 aa9.95□□□□□ -0.82
CASC3-204ENST00000474190 LRRC70Q7Z2Q7 622 aa9.95□□□□□ -0.82
CASC3-204ENST00000474190 GOLGA7Q7Z5G4 137 aa9.95□□□□□ -0.82
CASC3-204ENST00000474190 VN1R4Q7Z5H5 301 aa9.95□□□□□ -0.82
CASC3-204ENST00000474190 TMPRSS12Q86WS5 348 aa9.95□□□□□ -0.82
CASC3-204ENST00000474190 PLD3Q8IV08 490 aa9.95□□□□□ -0.82
CASC3-204ENST00000474190 CARFQ8N187 725 aa9.95□□□□□ -0.82
CASC3-204ENST00000474190 TCAIMQ8N3R3 496 aa9.95□□□□□ -0.82
CASC3-204ENST00000474190 C19orf47Q8N9M1 422 aaKnown RBP9.95□□□□□ -0.82
CASC3-204ENST00000474190 OR52B6Q8NGF0 335 aa9.95□□□□□ -0.82
CASC3-204ENST00000474190 WDR48Q8TAF3 677 aa9.95□□□□□ -0.82
CASC3-204ENST00000474190 RDH11Q8TC12 318 aa9.95□□□□□ -0.82
CASC3-204ENST00000474190 ZDHHC12Q96GR4 267 aa9.95□□□□□ -0.82
CASC3-204ENST00000474190 LIN37Q96GY3 246 aaPredicted RBP9.95□□□□□ -0.82
CASC3-204ENST00000474190 PKNOX2Q96KN3 472 aa9.95□□□□□ -0.82
CASC3-204ENST00000474190 TSNARE1Q96NA8 513 aa9.95□□□□□ -0.82
CASC3-204ENST00000474190 PRAP1Q96NZ9 151 aa9.95□□□□□ -0.82
CASC3-204ENST00000474190 OR2A5Q96R48 311 aa9.95□□□□□ -0.82
CASC3-204ENST00000474190 EGFL8Q99944 293 aa9.95□□□□□ -0.82
CASC3-204ENST00000474190 DPYSL5Q9BPU6 564 aa9.95□□□□□ -0.82
CASC3-204ENST00000474190 DPH7Q9BTV6 452 aa9.95□□□□□ -0.82
CASC3-204ENST00000474190 ERVK-6Q9BXR3 956 aa9.95□□□□□ -0.82
CASC3-204ENST00000474190 C20orf27Q9GZN8 174 aa9.95□□□□□ -0.82
CASC3-204ENST00000474190 ZNF395Q9H8N7 513 aaPredicted RBP9.95□□□□□ -0.82
CASC3-204ENST00000474190 CNOT10Q9H9A5 744 aaKnown RBP9.95□□□□□ -0.82
CASC3-204ENST00000474190 MLXIPLQ9NP71 852 aa9.95□□□□□ -0.82
CASC3-204ENST00000474190 DNAJC11Q9NVH1 559 aa9.95□□□□□ -0.82
CASC3-204ENST00000474190 FAM53CQ9NYF3 392 aa9.95□□□□□ -0.82
CASC3-204ENST00000474190 WWOXQ9NZC7 414 aa9.95□□□□□ -0.82
CASC3-204ENST00000474190 ZNF490Q9ULM2 529 aaPredicted RBP9.95□□□□□ -0.82
CASC3-204ENST00000474190 APOBEC2Q9Y235 224 aaKnown RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms