RNA–Protein interactions for RNA: ENST00000473494.6

SEC22A-204, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 1,011 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-204ENST00000473494 ECHDC1Q9NTX5 307 aa5.66□□□□□ -1.5
SEC22A-204ENST00000473494 DNAJC17Q9NVM6 304 aaKnown RBP5.66□□□□□ -1.5
SEC22A-204ENST00000473494 SLCO1C1Q9NYB5 712 aa5.66□□□□□ -1.5
SEC22A-204ENST00000473494 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.66□□□□□ -1.5
SEC22A-204ENST00000473494 SEPT10Q9P0V9 454 aa5.66□□□□□ -1.5
SEC22A-204ENST00000473494 RIMBP3CA6NJZ7 1639 aa5.66□□□□□ -1.5
SEC22A-204ENST00000473494 RIMBP3BA6NNM3 1639 aa5.66□□□□□ -1.5
SEC22A-204ENST00000473494 ABCA5Q8WWZ7 1642 aa5.66□□□□□ -1.5
SEC22A-204ENST00000473494 RIMBP3Q9UFD9 1639 aa5.66□□□□□ -1.5
SEC22A-204ENST00000473494 WRNQ14191 1432 aaPredicted RBP eCLIP5.65□□□□□ -1.5
SEC22A-204ENST00000473494 IGHV4-61A0A0C4DH41 118 aa5.65□□□□□ -1.5
SEC22A-204ENST00000473494 P2RY10O00398 339 aa5.65□□□□□ -1.5
SEC22A-204ENST00000473494 FGF17O60258 216 aa5.65□□□□□ -1.5
SEC22A-204ENST00000473494 GOSR1O95249 250 aa5.65□□□□□ -1.5
SEC22A-204ENST00000473494 BAG3O95817 575 aa5.65□□□□□ -1.5
SEC22A-204ENST00000473494 IGHV4-59P01825 116 aa5.65□□□□□ -1.5
SEC22A-204ENST00000473494 CRYAAP02489 173 aa5.65□□□□□ -1.5
SEC22A-204ENST00000473494 FRMD6-AS1P0C7T7 363 aa5.65□□□□□ -1.5
SEC22A-204ENST00000473494 RASGEF1BQ0VAM2 473 aa5.65□□□□□ -1.5
SEC22A-204ENST00000473494 MORF4L2Q15014 288 aa5.65□□□□□ -1.5
SEC22A-204ENST00000473494 PDLIM3Q53GG5 364 aaPredicted RBP5.65□□□□□ -1.5
SEC22A-204ENST00000473494 SLC35D3Q5M8T2 416 aa5.65□□□□□ -1.5
SEC22A-204ENST00000473494 LYSMD4Q5XG99 296 aa5.65□□□□□ -1.5
SEC22A-204ENST00000473494 KIAA1161Q6NSJ0 714 aa5.65□□□□□ -1.5
SEC22A-204ENST00000473494 CASC4Q6P4E1 433 aa5.65□□□□□ -1.5
SEC22A-204ENST00000473494 CREBRFQ8IUR6 639 aa5.65□□□□□ -1.5
SEC22A-204ENST00000473494 APCDD1Q8J025 514 aa5.65□□□□□ -1.5
SEC22A-204ENST00000473494 AMER3Q8N944 861 aa5.65□□□□□ -1.5
SEC22A-204ENST00000473494 NOA1Q8NC60 698 aaKnown RBP5.65□□□□□ -1.5
SEC22A-204ENST00000473494 FCAMRQ8WWV6 532 aa5.65□□□□□ -1.5
SEC22A-204ENST00000473494 SNRNP40Q96DI7 357 aaKnown RBP5.65□□□□□ -1.5
SEC22A-204ENST00000473494 MTMR12Q9C0I1 747 aa5.65□□□□□ -1.5
SEC22A-204ENST00000473494 IL1RAPL2Q9NP60 686 aa5.65□□□□□ -1.5
SEC22A-204ENST00000473494 CHST11Q9NPF2 352 aa5.65□□□□□ -1.5
SEC22A-204ENST00000473494 ADPRHL2Q9NX46 363 aa5.65□□□□□ -1.5
SEC22A-204ENST00000473494 P4HTMQ9NXG6 502 aa5.65□□□□□ -1.5
SEC22A-204ENST00000473494 CNIH4Q9P003 139 aa5.65□□□□□ -1.5
SEC22A-204ENST00000473494 VPS18Q9P253 973 aa5.65□□□□□ -1.5
SEC22A-204ENST00000473494 MTRRQ9UBK8 725 aa5.65□□□□□ -1.5
SEC22A-204ENST00000473494 ABCA10Q8WWZ4 1543 aa5.64□□□□□ -1.51
SEC22A-204ENST00000473494 C17orf105B2RV13 164 aa5.64□□□□□ -1.51
SEC22A-204ENST00000473494 BMPR1BO00238 502 aa5.64□□□□□ -1.51
SEC22A-204ENST00000473494 APOHP02749 345 aaPredicted RBP5.64□□□□□ -1.51
SEC22A-204ENST00000473494 ATP6V1B1P15313 513 aa5.64□□□□□ -1.51
SEC22A-204ENST00000473494 NKX2-1P43699 371 aaPredicted RBP5.64□□□□□ -1.51
SEC22A-204ENST00000473494 KCNJ1P48048 391 aa5.64□□□□□ -1.51
SEC22A-204ENST00000473494 RPL36AP83881 106 aaKnown RBP5.64□□□□□ -1.51
SEC22A-204ENST00000473494 CACNG1Q06432 222 aa5.64□□□□□ -1.51
SEC22A-204ENST00000473494 HERC3Q15034 1050 aa5.64□□□□□ -1.51
SEC22A-204ENST00000473494 ZNF789Q5FWF6 425 aa5.64□□□□□ -1.51
SEC22A-204ENST00000473494 FAM166AQ6J272 317 aa5.64□□□□□ -1.51
SEC22A-204ENST00000473494 PRSS55Q6UWB4 352 aaPredicted RBP5.64□□□□□ -1.51
SEC22A-204ENST00000473494 TUSC5Q8IXB3 177 aa5.64□□□□□ -1.51
SEC22A-204ENST00000473494 GPATCH11Q8N954 259 aa5.64□□□□□ -1.51
SEC22A-204ENST00000473494 NCOA7Q8NI08 942 aa5.64□□□□□ -1.51
SEC22A-204ENST00000473494 CTCFLQ8NI51 663 aaPredicted RBP5.64□□□□□ -1.51
SEC22A-204ENST00000473494 AK8Q96MA6 479 aa5.64□□□□□ -1.51
SEC22A-204ENST00000473494 OR2B2Q9GZK3 357 aa5.64□□□□□ -1.51
SEC22A-204ENST00000473494 SNX25Q9H3E2 840 aa5.64□□□□□ -1.51
SEC22A-204ENST00000473494 CPVLQ9H3G5 476 aa5.64□□□□□ -1.51
SEC22A-204ENST00000473494 ZNF334Q9HCZ1 680 aaPredicted RBP5.64□□□□□ -1.51
SEC22A-204ENST00000473494 RIPK3Q9Y572 518 aa5.64□□□□□ -1.51
SEC22A-204ENST00000473494 GAPVD1Q14C86 1478 aa5.64□□□□□ -1.51
SEC22A-204ENST00000473494 SLC16A8O95907 504 aa5.63□□□□□ -1.51
SEC22A-204ENST00000473494 SERPING1P05155 500 aa5.63□□□□□ -1.51
SEC22A-204ENST00000473494 CCND3P30281 292 aaPredicted RBP5.63□□□□□ -1.51
SEC22A-204ENST00000473494 CSTF2P33240 577 aaKnown RBP eCLIP5.63□□□□□ -1.51
SEC22A-204ENST00000473494 SNU13P55769 128 aaKnown RBP5.63□□□□□ -1.51
SEC22A-204ENST00000473494 P2RY6Q15077 328 aa5.63□□□□□ -1.51
SEC22A-204ENST00000473494 NONOQ15233 471 aaKnown RBP eCLIP5.63□□□□□ -1.51
SEC22A-204ENST00000473494 RBBP7Q16576 425 aa5.63□□□□□ -1.51
SEC22A-204ENST00000473494 SMU1Q2TAY7 513 aa5.63□□□□□ -1.51
SEC22A-204ENST00000473494 XKR3Q5GH77 459 aa5.63□□□□□ -1.51
SEC22A-204ENST00000473494 FAM76BQ5HYJ3 339 aa5.63□□□□□ -1.51
SEC22A-204ENST00000473494 RBMS3Q6XE24 437 aaKnown RBP5.63□□□□□ -1.51
SEC22A-204ENST00000473494 MARK2Q7KZI7 788 aaKnown RBP5.63□□□□□ -1.51
SEC22A-204ENST00000473494 TRPT1Q86TN4 253 aaKnown RBP5.63□□□□□ -1.51
SEC22A-204ENST00000473494 UNC45BQ8IWX7 931 aa5.63□□□□□ -1.51
SEC22A-204ENST00000473494 TSACCQ96A04 125 aaPredicted RBP5.63□□□□□ -1.51
SEC22A-204ENST00000473494 SENP5Q96HI0 755 aaPredicted RBP5.63□□□□□ -1.51
SEC22A-204ENST00000473494 GDAP1L1Q96MZ0 367 aa5.63□□□□□ -1.51
SEC22A-204ENST00000473494 CTAGE1Q96RT6 745 aa5.63□□□□□ -1.51
SEC22A-204ENST00000473494 CDK19Q9BWU1 502 aa5.63□□□□□ -1.51
SEC22A-204ENST00000473494 MMADHCQ9H3L0 296 aaPredicted RBP5.63□□□□□ -1.51
SEC22A-204ENST00000473494 BICC1Q9H694 974 aaKnown RBP5.63□□□□□ -1.51
SEC22A-204ENST00000473494 GPR132Q9UNW8 380 aa5.63□□□□□ -1.51
SEC22A-204ENST00000473494 GRIN2BQ13224 1484 aa5.63□□□□□ -1.51
SEC22A-204ENST00000473494 ARHGEF11O15085 1522 aa5.63□□□□□ -1.51
SEC22A-204ENST00000473494 EME2A4GXA9 379 aaPredicted RBP5.62□□□□□ -1.51
SEC22A-204ENST00000473494 SDR42E2A6NKP2 422 aa5.62□□□□□ -1.51
SEC22A-204ENST00000473494 KBTBD13C9JR72 458 aa5.62□□□□□ -1.51
SEC22A-204ENST00000473494 ZNF263O14978 683 aa5.62□□□□□ -1.51
SEC22A-204ENST00000473494 DFFBO76075 338 aa5.62□□□□□ -1.51
SEC22A-204ENST00000473494 BAG2O95816 211 aa5.62□□□□□ -1.51
SEC22A-204ENST00000473494 ITIH1P19827 911 aa5.62□□□□□ -1.51
SEC22A-204ENST00000473494 ITGA3P26006 1051 aa5.62□□□□□ -1.51
SEC22A-204ENST00000473494 IER3P46695 156 aa5.62□□□□□ -1.51
SEC22A-204ENST00000473494 STX1BP61266 288 aa5.62□□□□□ -1.51
SEC22A-204ENST00000473494 ST8SIA6P61647 398 aa5.62□□□□□ -1.51
SEC22A-204ENST00000473494 FOLH1Q04609 750 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms