RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 PARP6Q2NL67 630 aa9.12□□□□□ -0.95
MCF2L-223ENST00000473345 ZC3H12BQ5HYM0 836 aaKnown RBP9.12□□□□□ -0.95
MCF2L-223ENST00000473345 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.12□□□□□ -0.95
MCF2L-223ENST00000473345 TCTE1Q5JU00 501 aa9.12□□□□□ -0.95
MCF2L-223ENST00000473345 TSTD2Q5T7W7 516 aa9.12□□□□□ -0.95
MCF2L-223ENST00000473345 ZNF468Q5VIY5 522 aaPredicted RBP9.12□□□□□ -0.95
MCF2L-223ENST00000473345 IRAK1BP1Q5VVH5 260 aa9.12□□□□□ -0.95
MCF2L-223ENST00000473345 YOD1Q5VVQ6 348 aaPredicted RBP9.12□□□□□ -0.95
MCF2L-223ENST00000473345 ZNF449Q6P9G9 518 aa9.12□□□□□ -0.95
MCF2L-223ENST00000473345 SPNS3Q6ZMD2 512 aa9.12□□□□□ -0.95
MCF2L-223ENST00000473345 Q6ZPB1 254 aaPredicted RBP9.12□□□□□ -0.95
MCF2L-223ENST00000473345 SIAH3Q8IW03 269 aa9.12□□□□□ -0.95
MCF2L-223ENST00000473345 BEST3Q8N1M1 668 aa9.12□□□□□ -0.95
MCF2L-223ENST00000473345 TTC29Q8NA56 475 aaPredicted RBP9.12□□□□□ -0.95
MCF2L-223ENST00000473345 MDS2Q8NDY4 140 aa9.12□□□□□ -0.95
MCF2L-223ENST00000473345 NRGNQ92686 78 aa9.12□□□□□ -0.95
MCF2L-223ENST00000473345 TREX2Q9BQ50 279 aaPredicted RBP9.12□□□□□ -0.95
MCF2L-223ENST00000473345 ACAT2Q9BWD1 397 aa9.12□□□□□ -0.95
MCF2L-223ENST00000473345 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.12□□□□□ -0.951e-6■■■■□ 19.4
MCF2L-223ENST00000473345 ZNF700Q9H0M5 742 aa9.12□□□□□ -0.95
MCF2L-223ENST00000473345 P2RY12Q9H244 342 aa9.12□□□□□ -0.95
MCF2L-223ENST00000473345 TRPC4Q9UBN4 977 aa9.12□□□□□ -0.95
MCF2L-223ENST00000473345 FEZ2Q9UHY8 353 aaPredicted RBP9.12□□□□□ -0.95
MCF2L-223ENST00000473345 NEU2Q9Y3R4 380 aa9.12□□□□□ -0.95
MCF2L-223ENST00000473345 MED13LQ71F56 2210 aa9.12□□□□□ -0.95
MCF2L-223ENST00000473345 A0A0A6YYC8 382 aaPredicted RBP9.11□□□□□ -0.95
MCF2L-223ENST00000473345 DYTNA2CJ06 578 aa9.11□□□□□ -0.95
MCF2L-223ENST00000473345 OR5H15A6NDH6 313 aa9.11□□□□□ -0.95
MCF2L-223ENST00000473345 TARM1B6A8C7 271 aa9.11□□□□□ -0.95
MCF2L-223ENST00000473345 I3L1I5 382 aaPredicted RBP9.11□□□□□ -0.95
MCF2L-223ENST00000473345 SRPX2O60687 465 aaPredicted RBP9.11□□□□□ -0.95
MCF2L-223ENST00000473345 SEC24DO94855 1032 aaPredicted RBP9.11□□□□□ -0.95
MCF2L-223ENST00000473345 TPM1P09493 284 aa9.11□□□□□ -0.95
MCF2L-223ENST00000473345 ERGP11308 486 aa9.11□□□□□ -0.95
MCF2L-223ENST00000473345 PIM1P11309 404 aaPredicted RBP9.11□□□□□ -0.95
MCF2L-223ENST00000473345 ETS1P14921 441 aa9.11□□□□□ -0.95
MCF2L-223ENST00000473345 HOXB4P17483 251 aaPredicted RBP9.11□□□□□ -0.95
MCF2L-223ENST00000473345 FBLP22087 321 aaKnown RBP9.11□□□□□ -0.95
MCF2L-223ENST00000473345 ARNTP27540 789 aa9.11□□□□□ -0.95
MCF2L-223ENST00000473345 KLF1Q13351 362 aaPredicted RBP9.11□□□□□ -0.95
MCF2L-223ENST00000473345 DSG2Q14126 1118 aa9.11□□□□□ -0.95
MCF2L-223ENST00000473345 GBX1Q14549 363 aa9.11□□□□□ -0.95
MCF2L-223ENST00000473345 KRTAP21-3Q3LHN1 58 aa9.11□□□□□ -0.95
MCF2L-223ENST00000473345 CTSL3PQ5NE16 218 aa9.11□□□□□ -0.95
MCF2L-223ENST00000473345 ZNF425Q6IV72 752 aa9.11□□□□□ -0.95
MCF2L-223ENST00000473345 CNSTQ6PJW8 725 aa9.11□□□□□ -0.95
MCF2L-223ENST00000473345 SUSD1Q6UWL2 747 aa9.11□□□□□ -0.95
MCF2L-223ENST00000473345 UNC5DQ6UXZ4 953 aa9.11□□□□□ -0.95
MCF2L-223ENST00000473345 PAQR7Q86WK9 346 aa9.11□□□□□ -0.95
MCF2L-223ENST00000473345 ZNF227Q86WZ6 799 aa9.11□□□□□ -0.95
MCF2L-223ENST00000473345 PLD3Q8IV08 490 aa9.11□□□□□ -0.95
MCF2L-223ENST00000473345 MARVELD2Q8N4S9 558 aa9.11□□□□□ -0.95
MCF2L-223ENST00000473345 LRRC57Q8N9N7 239 aa9.11□□□□□ -0.95
MCF2L-223ENST00000473345 SLC35B2Q8TB61 432 aa9.11□□□□□ -0.95
MCF2L-223ENST00000473345 HMGCLL1Q8TB92 370 aa9.11□□□□□ -0.95
MCF2L-223ENST00000473345 ZUFSPQ96AP4 578 aa9.11□□□□□ -0.95
MCF2L-223ENST00000473345 FAM136AQ96C01 138 aa9.11□□□□□ -0.95
MCF2L-223ENST00000473345 MTFMTQ96DP5 389 aaKnown RBP9.11□□□□□ -0.95
MCF2L-223ENST00000473345 OR2A5Q96R48 311 aa9.11□□□□□ -0.95
MCF2L-223ENST00000473345 MACROD1Q9BQ69 325 aa9.11□□□□□ -0.95
MCF2L-223ENST00000473345 DPH7Q9BTV6 452 aa9.11□□□□□ -0.95
MCF2L-223ENST00000473345 CARD6Q9BX69 1037 aa9.11□□□□□ -0.95
MCF2L-223ENST00000473345 VN1R1Q9GZP7 353 aa9.11□□□□□ -0.95
MCF2L-223ENST00000473345 LACRTQ9GZZ8 138 aa9.11□□□□□ -0.95
MCF2L-223ENST00000473345 RNF32Q9H0A6 362 aa9.11□□□□□ -0.95
MCF2L-223ENST00000473345 ENKD1Q9H0I2 346 aa9.11□□□□□ -0.95
MCF2L-223ENST00000473345 LRRC40Q9H9A6 602 aa9.11□□□□□ -0.95
MCF2L-223ENST00000473345 CHST11Q9NPF2 352 aa9.11□□□□□ -0.95
MCF2L-223ENST00000473345 PACSIN2Q9UNF0 486 aaPredicted RBP9.11□□□□□ -0.95
MCF2L-223ENST00000473345 EFR3BQ9Y2G0 817 aa9.11□□□□□ -0.95
MCF2L-223ENST00000473345 MEMO1Q9Y316 297 aa9.11□□□□□ -0.95
MCF2L-223ENST00000473345 PCDHA13Q9Y5I0 950 aa9.11□□□□□ -0.95
MCF2L-223ENST00000473345 GRID2IPA4D2P6 1211 aa9.1□□□□□ -0.95
MCF2L-223ENST00000473345 ARHGEF33A8MVX0 844 aa9.1□□□□□ -0.95
MCF2L-223ENST00000473345 DNAJB6O75190 326 aa9.1□□□□□ -0.95
MCF2L-223ENST00000473345 CTNNA2P26232 953 aa9.1□□□□□ -0.95
MCF2L-223ENST00000473345 CD96P40200 585 aa9.1□□□□□ -0.95
MCF2L-223ENST00000473345 COPS2P61201 443 aa9.1□□□□□ -0.95
MCF2L-223ENST00000473345 CSNK1G2P78368 415 aa9.1□□□□□ -0.95
MCF2L-223ENST00000473345 CRADDP78560 199 aa9.1□□□□□ -0.95
MCF2L-223ENST00000473345 OCA2Q04671 838 aa9.1□□□□□ -0.95
MCF2L-223ENST00000473345 ZNF33BQ06732 778 aa9.1□□□□□ -0.95
MCF2L-223ENST00000473345 TUBA3CQ13748 450 aa9.1□□□□□ -0.95
MCF2L-223ENST00000473345 FAM214AQ32MH5 1076 aa9.1□□□□□ -0.95
MCF2L-223ENST00000473345 ZNF766Q5HY98 468 aa9.1□□□□□ -0.95
MCF2L-223ENST00000473345 CCDC181Q5TID7 509 aa9.1□□□□□ -0.95
MCF2L-223ENST00000473345 SPINK14Q6IE38 97 aa9.1□□□□□ -0.95
MCF2L-223ENST00000473345 H3F3CQ6NXT2 135 aa9.1□□□□□ -0.95
MCF2L-223ENST00000473345 PRMT9Q6P2P2 845 aa9.1□□□□□ -0.95
MCF2L-223ENST00000473345 LRRC8BQ6P9F7 803 aa9.1□□□□□ -0.95
MCF2L-223ENST00000473345 TUBA3EQ6PEY2 450 aa9.1□□□□□ -0.95
MCF2L-223ENST00000473345 XKRXQ6PP77 449 aa9.1□□□□□ -0.95
MCF2L-223ENST00000473345 RPTNQ6XPR3 784 aa9.1□□□□□ -0.95
MCF2L-223ENST00000473345 CDH24Q86UP0 819 aa9.1□□□□□ -0.95
MCF2L-223ENST00000473345 RPRMLQ8N4K4 120 aa9.1□□□□□ -0.95
MCF2L-223ENST00000473345 PPFIBP2Q8ND30 876 aa9.1□□□□□ -0.95
MCF2L-223ENST00000473345 ATG4AQ8WYN0 398 aa9.1□□□□□ -0.95
MCF2L-223ENST00000473345 CABS1Q96KC9 395 aa9.1□□□□□ -0.95
MCF2L-223ENST00000473345 GPR137Q96N19 417 aa9.1□□□□□ -0.95
MCF2L-223ENST00000473345 FRMD6Q96NE9 622 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms