RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 HTR6P50406 440 aa16.92■□□□□ 0.3
HSPG2-208ENST00000471322 NAE1Q13564 534 aa16.92■□□□□ 0.3
HSPG2-208ENST00000471322 NFE2L1Q14494 772 aa16.92■□□□□ 0.3
HSPG2-208ENST00000471322 IMPG1Q17R60 797 aa16.92■□□□□ 0.3
HSPG2-208ENST00000471322 AP5B1Q2VPB7 878 aa16.92■□□□□ 0.3
HSPG2-208ENST00000471322 COQ5Q5HYK3 327 aa16.92■□□□□ 0.3
HSPG2-208ENST00000471322 METRNLQ641Q3 311 aa16.92■□□□□ 0.3
HSPG2-208ENST00000471322 BNC2Q6ZN30 1099 aaPredicted RBP16.92■□□□□ 0.3
HSPG2-208ENST00000471322 PDZD3Q86UT5 571 aa16.92■□□□□ 0.3
HSPG2-208ENST00000471322 IQCHQ86VS3 1027 aa16.92■□□□□ 0.3
HSPG2-208ENST00000471322 FUNDC1Q8IVP5 155 aa16.92■□□□□ 0.3
HSPG2-208ENST00000471322 PYCR2Q96C36 320 aa16.92■□□□□ 0.3
HSPG2-208ENST00000471322 ROPN1LQ96C74 230 aa16.92■□□□□ 0.3
HSPG2-208ENST00000471322 ELF4Q99607 663 aaPredicted RBP16.92■□□□□ 0.3
HSPG2-208ENST00000471322 OR52A5Q9H2C5 316 aa16.92■□□□□ 0.3
HSPG2-208ENST00000471322 ELOVL6Q9H5J4 265 aa16.92■□□□□ 0.3
HSPG2-208ENST00000471322 WDR41Q9HAD4 459 aa16.92■□□□□ 0.3
HSPG2-208ENST00000471322 GPRC5BQ9NZH0 403 aa16.92■□□□□ 0.3
HSPG2-208ENST00000471322 NOP53Q9NZM5 478 aaKnown RBP16.92■□□□□ 0.3
HSPG2-208ENST00000471322 GIMAP2Q9UG22 337 aa16.92■□□□□ 0.3
HSPG2-208ENST00000471322 ACSL5Q9ULC5 683 aa16.92■□□□□ 0.3
HSPG2-208ENST00000471322 EIF3LQ9Y262 564 aaKnown RBP16.92■□□□□ 0.3
HSPG2-208ENST00000471322 HS3ST3A1Q9Y663 406 aa16.92■□□□□ 0.3
HSPG2-208ENST00000471322 KCNE1BA0A087WTH5 132 aa16.91■□□□□ 0.3
HSPG2-208ENST00000471322 DYTNA2CJ06 578 aa16.91■□□□□ 0.3
HSPG2-208ENST00000471322 FFAR3O14843 346 aa16.91■□□□□ 0.3
HSPG2-208ENST00000471322 CLGNO14967 610 aa16.91■□□□□ 0.3
HSPG2-208ENST00000471322 GPR42O15529 346 aa16.91■□□□□ 0.3
HSPG2-208ENST00000471322 SDC3O75056 442 aa16.91■□□□□ 0.3
HSPG2-208ENST00000471322 SLC22A3O75751 556 aa16.91■□□□□ 0.3
HSPG2-208ENST00000471322 SLC16A8O95907 504 aa16.91■□□□□ 0.3
HSPG2-208ENST00000471322 CD1EP15812 388 aa16.91■□□□□ 0.3
HSPG2-208ENST00000471322 IMPA1P29218 277 aa16.91■□□□□ 0.3
HSPG2-208ENST00000471322 GNPDA1P46926 289 aa16.91■□□□□ 0.3
HSPG2-208ENST00000471322 DIO3P55073 304 aa16.91■□□□□ 0.3
HSPG2-208ENST00000471322 MTTPP55157 894 aa16.91■□□□□ 0.3
HSPG2-208ENST00000471322 IRF8Q02556 426 aa16.91■□□□□ 0.3
HSPG2-208ENST00000471322 KPNB1Q14974 876 aaKnown RBP16.91■□□□□ 0.3
HSPG2-208ENST00000471322 CPSF6Q16630 551 aaKnown RBP eCLIP16.91■□□□□ 0.3
HSPG2-208ENST00000471322 C1orf146Q5VVC0 180 aa16.91■□□□□ 0.3
HSPG2-208ENST00000471322 FAM219BQ5XKK7 198 aa16.91■□□□□ 0.3
HSPG2-208ENST00000471322 CAPN13Q6MZZ7 669 aaPredicted RBP16.91■□□□□ 0.3
HSPG2-208ENST00000471322 GATAD2AQ86YP4 633 aa16.91■□□□□ 0.3
HSPG2-208ENST00000471322 DENND6BQ8NEG7 585 aa16.91■□□□□ 0.3
HSPG2-208ENST00000471322 RAD51AP1Q96B01 352 aa16.91■□□□□ 0.3
HSPG2-208ENST00000471322 CLPTM1LQ96KA5 538 aa16.91■□□□□ 0.3
HSPG2-208ENST00000471322 CAMK1GQ96NX5 476 aa16.91■□□□□ 0.3
HSPG2-208ENST00000471322 DCLRE1BQ9H816 532 aa16.91■□□□□ 0.3
HSPG2-208ENST00000471322 TM7SF3Q9NS93 570 aa16.91■□□□□ 0.3
HSPG2-208ENST00000471322 ZNHIT2Q9UHR6 403 aa16.91■□□□□ 0.3
HSPG2-208ENST00000471322 CCL27Q9Y4X3 112 aa16.91■□□□□ 0.3
HSPG2-208ENST00000471322 TP53BP1Q12888 1972 aaPredicted RBP16.9■□□□□ 0.3
HSPG2-208ENST00000471322 CACNB4O00305 520 aaPredicted RBP16.9■□□□□ 0.3
HSPG2-208ENST00000471322 IFRD1O00458 451 aaPredicted RBP16.9■□□□□ 0.3
HSPG2-208ENST00000471322 SCAMP1O15126 338 aa16.9■□□□□ 0.3
HSPG2-208ENST00000471322 JUPP14923 745 aa16.9■□□□□ 0.3
HSPG2-208ENST00000471322 HSD17B2P37059 387 aa16.9■□□□□ 0.3
HSPG2-208ENST00000471322 HNF4AP41235 474 aa16.9■□□□□ 0.3
HSPG2-208ENST00000471322 HALP42357 657 aa16.9■□□□□ 0.3
HSPG2-208ENST00000471322 DMPKQ09013 629 aa16.9■□□□□ 0.3
HSPG2-208ENST00000471322 CHIT1Q13231 466 aa16.9■□□□□ 0.3
HSPG2-208ENST00000471322 LRP8Q14114 963 aa16.9■□□□□ 0.3
HSPG2-208ENST00000471322 TCEA2Q15560 299 aa16.9■□□□□ 0.3
HSPG2-208ENST00000471322 PLA2G4EQ3MJ16 856 aa16.9■□□□□ 0.3
HSPG2-208ENST00000471322 REP15Q6BDI9 236 aa16.9■□□□□ 0.3
HSPG2-208ENST00000471322 BLOC1S3Q6QNY0 202 aa16.9■□□□□ 0.3
HSPG2-208ENST00000471322 XKR5Q6UX68 686 aa16.9■□□□□ 0.3
HSPG2-208ENST00000471322 GALNT13Q8IUC8 556 aa16.9■□□□□ 0.3
HSPG2-208ENST00000471322 SELENOMQ8WWX9 145 aa16.9■□□□□ 0.3
HSPG2-208ENST00000471322 STMN2Q93045 179 aa16.9■□□□□ 0.3
HSPG2-208ENST00000471322 MED8Q96G25 268 aa16.9■□□□□ 0.3
HSPG2-208ENST00000471322 NPAS2Q99743 824 aa16.9■□□□□ 0.3
HSPG2-208ENST00000471322 TIMM29Q9BSF4 260 aa16.9■□□□□ 0.3
HSPG2-208ENST00000471322 RNPEPL1Q9HAU8 725 aa16.9■□□□□ 0.3
HSPG2-208ENST00000471322 INTS7Q9NVH2 962 aaKnown RBP16.9■□□□□ 0.3
HSPG2-208ENST00000471322 DNAAF2Q9NVR5 837 aaKnown RBP16.9■□□□□ 0.3
HSPG2-208ENST00000471322 ASIC5Q9NY37 505 aa16.9■□□□□ 0.3
HSPG2-208ENST00000471322 SLC17A4Q9Y2C5 497 aa16.9■□□□□ 0.3
HSPG2-208ENST00000471322 KCNE2Q9Y6J6 123 aa16.9■□□□□ 0.3
HSPG2-208ENST00000471322 FAM234BA2RU67 622 aa16.89■□□□□ 0.29
HSPG2-208ENST00000471322 MRASO14807 208 aa16.89■□□□□ 0.29
HSPG2-208ENST00000471322 SLC30A4O14863 429 aa16.89■□□□□ 0.29
HSPG2-208ENST00000471322 ANGPT2O15123 496 aa16.89■□□□□ 0.29
HSPG2-208ENST00000471322 ENTPD5O75356 428 aa16.89■□□□□ 0.29
HSPG2-208ENST00000471322 SLC2A4P14672 509 aa16.89■□□□□ 0.29
HSPG2-208ENST00000471322 GNAZP19086 355 aa16.89■□□□□ 0.29
HSPG2-208ENST00000471322 KELP23276 732 aa16.89■□□□□ 0.29
HSPG2-208ENST00000471322 CASP2P42575 452 aa16.89■□□□□ 0.29
HSPG2-208ENST00000471322 RABIFP47224 123 aa16.89■□□□□ 0.29
HSPG2-208ENST00000471322 THOP1P52888 689 aa16.89■□□□□ 0.29
HSPG2-208ENST00000471322 LIMK1P53667 647 aa16.89■□□□□ 0.29
HSPG2-208ENST00000471322 KCNK10P57789 538 aa16.89■□□□□ 0.29
HSPG2-208ENST00000471322 ACTR3P61158 418 aa16.89■□□□□ 0.29
HSPG2-208ENST00000471322 BNIP3Q12983 259 aa16.89■□□□□ 0.29
HSPG2-208ENST00000471322 FZD2Q14332 565 aa16.89■□□□□ 0.29
HSPG2-208ENST00000471322 SHBQ15464 509 aa16.89■□□□□ 0.29
HSPG2-208ENST00000471322 CCSMST1Q4G0I0 132 aa16.89■□□□□ 0.29
HSPG2-208ENST00000471322 FAM83HQ6ZRV2 1179 aaPredicted RBP16.89■□□□□ 0.29
HSPG2-208ENST00000471322 DCUN1D3Q8IWE4 304 aa16.89■□□□□ 0.29
HSPG2-208ENST00000471322 FAM9CQ8IZT9 166 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms