RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 REXO4Q9GZR2 422 aaKnown RBP13.25□□□□□ -0.29
BRCA1-209ENST00000470026 DNAJC11Q9NVH1 559 aa13.25□□□□□ -0.29
BRCA1-209ENST00000470026 MICAL3Q7RTP6 2002 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 C1QCP02747 245 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 ARHGDIAP52565 204 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 VLDLRP98155 873 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 MVKQ03426 396 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 CSTF3Q12996 717 aaKnown RBP13.24□□□□□ -0.29
BRCA1-209ENST00000470026 VEZF1Q14119 521 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 NPTX1Q15818 432 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 ADPRMQ3LIE5 342 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 FAHD1Q6P587 224 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 HTR3DQ70Z44 454 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 GALNT5Q7Z7M9 940 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 VRK3Q8IV63 474 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 METTL2AQ96IZ6 378 aaKnown RBP13.24□□□□□ -0.29
BRCA1-209ENST00000470026 APOLD1Q96LR9 279 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 NEURL2Q9BR09 285 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 WDR12Q9GZL7 423 aaKnown RBP13.24□□□□□ -0.29
BRCA1-209ENST00000470026 CCNB1IP1Q9NPC3 277 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 FBXO8Q9NRD0 319 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 FAM120CQ9NX05 1096 aaKnown RBP13.24□□□□□ -0.29
BRCA1-209ENST00000470026 MBD1Q9UIS9 605 aaPredicted RBP13.24□□□□□ -0.29
BRCA1-209ENST00000470026 AP1M2Q9Y6Q5 423 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 A8MX80 341 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 SERPINB7O75635 380 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 ZNF682O95780 498 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 FABP3P05413 133 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 HIST1H2AGP0C0S8 130 aaPredicted RBP13.24□□□□□ -0.29
BRCA1-209ENST00000470026 ENGP17813 658 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 HIST1H2ADP20671 130 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 EFNA1P20827 205 aaPredicted RBP13.24□□□□□ -0.29
BRCA1-209ENST00000470026 NR4A1P22736 598 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 FSHRP23945 695 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 FMO3P31513 532 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 CD70P32970 193 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 ITGA1P56199 1179 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 SNRPD1P62314 119 aaKnown RBP13.24□□□□□ -0.29
BRCA1-209ENST00000470026 SP3Q02447 781 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 OCA2Q04671 838 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 ITGADQ13349 1161 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 MAD2L1BPQ15013 274 aaPredicted RBP13.24□□□□□ -0.29
BRCA1-209ENST00000470026 LIPJQ5W064 366 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 TXNDC8Q6A555 127 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 ZCCHC8Q6NZY4 707 aaKnown RBP13.24□□□□□ -0.29
BRCA1-209ENST00000470026 RFLNAQ6ZTI6 216 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 USP45Q70EL2 814 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 CYP2U1Q7Z449 544 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 TCEAL8Q8IYN2 117 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 SYNPOQ8N3V7 929 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 NAT16Q8N8M0 369 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 ZBTB8BQ8NAP8 495 aaPredicted RBP13.24□□□□□ -0.29
BRCA1-209ENST00000470026 S100ZQ8WXG8 99 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 HIST1H2AHQ96KK5 128 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 ALPK1Q96QP1 1244 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 HIST1H2AJQ99878 128 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 P2RY13Q9BPV8 354 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 APOL4Q9BPW4 351 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 H2AFJQ9BTM1 129 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 SPATA9Q9BWV2 254 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 BTBD2Q9BX70 525 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 CPEB1Q9BZB8 566 aaKnown RBP13.24□□□□□ -0.29
BRCA1-209ENST00000470026 CHST8Q9H2A9 424 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 RIBC2Q9H4K1 309 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 SUV39H2Q9H5I1 410 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 HMG20AQ9NP66 347 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 SCN3BQ9NY72 215 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 SLC22A14Q9Y267 594 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 DGKBQ9Y6T7 804 aa13.24□□□□□ -0.29
BRCA1-209ENST00000470026 KPNA4O00629 521 aaPredicted RBP13.23□□□□□ -0.29
BRCA1-209ENST00000470026 FPGTO14772 594 aa13.23□□□□□ -0.29
BRCA1-209ENST00000470026 EPN2O95208 641 aa13.23□□□□□ -0.29
BRCA1-209ENST00000470026 LRATO95237 230 aa13.23□□□□□ -0.29
BRCA1-209ENST00000470026 CXCL10P02778 98 aa13.23□□□□□ -0.29
BRCA1-209ENST00000470026 C1SP09871 688 aa13.23□□□□□ -0.29
BRCA1-209ENST00000470026 SRCP12931 536 aa13.23□□□□□ -0.29
BRCA1-209ENST00000470026 PFN3P60673 137 aa13.23□□□□□ -0.29
BRCA1-209ENST00000470026 PCDH1Q08174 1060 aa13.23□□□□□ -0.29
BRCA1-209ENST00000470026 ATP1A4Q13733 1029 aa13.23□□□□□ -0.29
BRCA1-209ENST00000470026 GTF2H3Q13889 308 aa13.23□□□□□ -0.29
BRCA1-209ENST00000470026 KCNC3Q14003 757 aa13.23□□□□□ -0.29
BRCA1-209ENST00000470026 SIM2Q14190 667 aaPredicted RBP13.23□□□□□ -0.29
BRCA1-209ENST00000470026 MPPE1Q53F39 396 aa13.23□□□□□ -0.29
BRCA1-209ENST00000470026 LDLRAP1Q5SW96 308 aa13.23□□□□□ -0.29
BRCA1-209ENST00000470026 EGFLAMQ63HQ2 1017 aa13.23□□□□□ -0.29
BRCA1-209ENST00000470026 CCDC71Q8IV32 467 aaPredicted RBP13.23□□□□□ -0.29
BRCA1-209ENST00000470026 KLHDC8AQ8IYD2 350 aa13.23□□□□□ -0.29
BRCA1-209ENST00000470026 SLC22A15Q8IZD6 547 aa13.23□□□□□ -0.29
BRCA1-209ENST00000470026 MFSD4AQ8N468 514 aa13.23□□□□□ -0.29
BRCA1-209ENST00000470026 TTC29Q8NA56 475 aaPredicted RBP13.23□□□□□ -0.29
BRCA1-209ENST00000470026 OR7A2PQ8NGA2 310 aa13.23□□□□□ -0.29
BRCA1-209ENST00000470026 WDR20Q8TBZ3 569 aa13.23□□□□□ -0.29
BRCA1-209ENST00000470026 DYNC2LI1Q8TCX1 351 aa13.23□□□□□ -0.29
BRCA1-209ENST00000470026 PXYLP1Q8TE99 480 aa13.23□□□□□ -0.29
BRCA1-209ENST00000470026 BHMTQ93088 406 aa13.23□□□□□ -0.29
BRCA1-209ENST00000470026 CCDC90BQ9GZT6 254 aa13.23□□□□□ -0.29
BRCA1-209ENST00000470026 SPATA6Q9NWH7 488 aaPredicted RBP13.23□□□□□ -0.29
BRCA1-209ENST00000470026 GIN1Q9NXP7 522 aa13.23□□□□□ -0.29
BRCA1-209ENST00000470026 HS3ST2Q9Y278 367 aa13.23□□□□□ -0.29
BRCA1-209ENST00000470026 GMPPBQ9Y5P6 360 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms