RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 GSDMBQ8TAX9 411 aa11.67□□□□□ -0.54
HDAC3-204ENST00000469207 HMGCLL1Q8TB92 370 aa11.67□□□□□ -0.54
HDAC3-204ENST00000469207 CABS1Q96KC9 395 aa11.67□□□□□ -0.54
HDAC3-204ENST00000469207 BAG1Q99933 345 aaPredicted RBP11.67□□□□□ -0.54
HDAC3-204ENST00000469207 ZFYVE21Q9BQ24 234 aa11.67□□□□□ -0.54
HDAC3-204ENST00000469207 TRPC4Q9UBN4 977 aa11.67□□□□□ -0.54
HDAC3-204ENST00000469207 GNPTGQ9UJJ9 305 aa11.67□□□□□ -0.54
HDAC3-204ENST00000469207 RUVBL1Q9Y265 456 aaKnown RBP11.67□□□□□ -0.54
HDAC3-204ENST00000469207 CRYL1Q9Y2S2 319 aa11.67□□□□□ -0.54
HDAC3-204ENST00000469207 KLK4Q9Y5K2 254 aa11.67□□□□□ -0.54
HDAC3-204ENST00000469207 IGLV3-12A0A075B6K2 115 aa11.66□□□□□ -0.54
HDAC3-204ENST00000469207 IGHV1-45A0A0A0MS14 117 aa11.66□□□□□ -0.54
HDAC3-204ENST00000469207 IGHV3-20A0A0C4DH32 117 aa11.66□□□□□ -0.54
HDAC3-204ENST00000469207 TCRBV7S3A2A0A539 114 aa11.66□□□□□ -0.54
HDAC3-204ENST00000469207 HNRNPRO43390 633 aaKnown RBP11.66□□□□□ -0.54
HDAC3-204ENST00000469207 FOXS1O43638 330 aa11.66□□□□□ -0.54
HDAC3-204ENST00000469207 VAPBO95292 243 aa11.66□□□□□ -0.54
HDAC3-204ENST00000469207 MATN4O95460 622 aa11.66□□□□□ -0.54
HDAC3-204ENST00000469207 WDPCPO95876 746 aa11.66□□□□□ -0.54
HDAC3-204ENST00000469207 ITGAMP11215 1152 aa11.66□□□□□ -0.54
HDAC3-204ENST00000469207 MGAT1P26572 445 aa11.66□□□□□ -0.54
HDAC3-204ENST00000469207 MST1P26927 711 aa11.66□□□□□ -0.54
HDAC3-204ENST00000469207 SOX11P35716 441 aa11.66□□□□□ -0.54
HDAC3-204ENST00000469207 KCNJ1P48048 391 aa11.66□□□□□ -0.54
HDAC3-204ENST00000469207 TNFSF10P50591 281 aa11.66□□□□□ -0.54
HDAC3-204ENST00000469207 PER3P56645 1201 aa11.66□□□□□ -0.54
HDAC3-204ENST00000469207 MAT1AQ00266 395 aaKnown RBP11.66□□□□□ -0.54
HDAC3-204ENST00000469207 SIX1Q15475 284 aaPredicted RBP11.66□□□□□ -0.54
HDAC3-204ENST00000469207 MUM1Q2TAK8 710 aa11.66□□□□□ -0.54
HDAC3-204ENST00000469207 ACSBG2Q5FVE4 666 aa11.66□□□□□ -0.54
HDAC3-204ENST00000469207 AARS2Q5JTZ9 985 aaKnown RBP11.66□□□□□ -0.54
HDAC3-204ENST00000469207 RPUSD3Q6P087 351 aaKnown RBP11.66□□□□□ -0.54
HDAC3-204ENST00000469207 PRMT9Q6P2P2 845 aa11.66□□□□□ -0.54
HDAC3-204ENST00000469207 OTUD6BQ8N6M0 293 aa11.66□□□□□ -0.54
HDAC3-204ENST00000469207 BCORP1Q8N888 145 aa11.66□□□□□ -0.54
HDAC3-204ENST00000469207 AMER3Q8N944 861 aa11.66□□□□□ -0.54
HDAC3-204ENST00000469207 CCDC89Q8N998 374 aa11.66□□□□□ -0.54
HDAC3-204ENST00000469207 HAS2Q92819 552 aa11.66□□□□□ -0.54
HDAC3-204ENST00000469207 MMABQ96EY8 250 aaPredicted RBP11.66□□□□□ -0.54
HDAC3-204ENST00000469207 MRFAP1L1Q96HT8 127 aa11.66□□□□□ -0.54
HDAC3-204ENST00000469207 PANX3Q96QZ0 392 aa11.66□□□□□ -0.54
HDAC3-204ENST00000469207 SLC30A3Q99726 388 aa11.66□□□□□ -0.54
HDAC3-204ENST00000469207 TRIM56Q9BRZ2 755 aaKnown RBP11.66□□□□□ -0.54
HDAC3-204ENST00000469207 RAB11FIP5Q9BXF6 653 aa11.66□□□□□ -0.54
HDAC3-204ENST00000469207 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.66□□□□□ -0.54
HDAC3-204ENST00000469207 MRPS30Q9NP92 439 aaKnown RBP11.66□□□□□ -0.54
HDAC3-204ENST00000469207 SYBUQ9NX95 663 aa11.66□□□□□ -0.54
HDAC3-204ENST00000469207 SH3BGRL2Q9UJC5 107 aa11.66□□□□□ -0.54
HDAC3-204ENST00000469207 ENTPD4Q9Y227 616 aa11.66□□□□□ -0.54
HDAC3-204ENST00000469207 MRPS2Q9Y399 296 aaKnown RBP11.66□□□□□ -0.54
HDAC3-204ENST00000469207 FAM169AQ9Y6X4 670 aa11.66□□□□□ -0.54
HDAC3-204ENST00000469207 A0A0A6YYC8 382 aaPredicted RBP11.65□□□□□ -0.54
HDAC3-204ENST00000469207 DYTNA2CJ06 578 aa11.65□□□□□ -0.54
HDAC3-204ENST00000469207 ARHGEF33A8MVX0 844 aa11.65□□□□□ -0.54
HDAC3-204ENST00000469207 I3L1I5 382 aaPredicted RBP11.65□□□□□ -0.54
HDAC3-204ENST00000469207 PCDH17O14917 1159 aa11.65□□□□□ -0.54
HDAC3-204ENST00000469207 P2RX6O15547 441 aa11.65□□□□□ -0.54
HDAC3-204ENST00000469207 AVILO75366 819 aa11.65□□□□□ -0.54
HDAC3-204ENST00000469207 WFS1O76024 890 aa11.65□□□□□ -0.54
HDAC3-204ENST00000469207 FKBP9O95302 570 aa11.65□□□□□ -0.54
HDAC3-204ENST00000469207 HEXBP07686 556 aa11.65□□□□□ -0.54
HDAC3-204ENST00000469207 SNRPB2P08579 225 aaKnown RBP11.65□□□□□ -0.54
HDAC3-204ENST00000469207 ERVK-10P10266 1014 aa11.65□□□□□ -0.54
HDAC3-204ENST00000469207 CHRM3P20309 590 aa11.65□□□□□ -0.54
HDAC3-204ENST00000469207 RPS3P23396 243 aaKnown RBP eCLIP11.65□□□□□ -0.54
HDAC3-204ENST00000469207 CMPK1P30085 196 aa11.65□□□□□ -0.54
HDAC3-204ENST00000469207 SLC26A3P40879 764 aa11.65□□□□□ -0.54
HDAC3-204ENST00000469207 PMP22Q01453 160 aa11.65□□□□□ -0.54
HDAC3-204ENST00000469207 GBX1Q14549 363 aa11.65□□□□□ -0.54
HDAC3-204ENST00000469207 KCNJ11Q14654 390 aa11.65□□□□□ -0.54
HDAC3-204ENST00000469207 PCOLCEQ15113 449 aa11.65□□□□□ -0.54
HDAC3-204ENST00000469207 KLHL38Q2WGJ6 581 aa11.65□□□□□ -0.54
HDAC3-204ENST00000469207 SEL1L2Q5TEA6 688 aa11.65□□□□□ -0.54
HDAC3-204ENST00000469207 GFRALQ6UXV0 394 aa11.65□□□□□ -0.54
HDAC3-204ENST00000469207 PAQR7Q86WK9 346 aa11.65□□□□□ -0.54
HDAC3-204ENST00000469207 MCEMP1Q8IX19 187 aa11.65□□□□□ -0.54
HDAC3-204ENST00000469207 SLC34A3Q8N130 599 aa11.65□□□□□ -0.54
HDAC3-204ENST00000469207 CSNK1A1LQ8N752 337 aa11.65□□□□□ -0.54
HDAC3-204ENST00000469207 OR9A1PQ8NGU1 263 aa11.65□□□□□ -0.54
HDAC3-204ENST00000469207 COG1Q8WTW3 980 aa11.65□□□□□ -0.54
HDAC3-204ENST00000469207 NR4A3Q92570 626 aa11.65□□□□□ -0.54
HDAC3-204ENST00000469207 LPGAT1Q92604 370 aa11.65□□□□□ -0.54
HDAC3-204ENST00000469207 PEX13Q92968 403 aa11.65□□□□□ -0.54
HDAC3-204ENST00000469207 FOPNLQ96NB1 174 aa11.65□□□□□ -0.54
HDAC3-204ENST00000469207 OR2A5Q96R48 311 aa11.65□□□□□ -0.54
HDAC3-204ENST00000469207 PKP4Q99569 1192 aa11.65□□□□□ -0.54
HDAC3-204ENST00000469207 MACROD1Q9BQ69 325 aa11.65□□□□□ -0.54
HDAC3-204ENST00000469207 PLCD4Q9BRC7 762 aa11.65□□□□□ -0.54
HDAC3-204ENST00000469207 PAK5Q9P286 719 aa11.65□□□□□ -0.54
HDAC3-204ENST00000469207 COPG2Q9UBF2 871 aa11.65□□□□□ -0.54
HDAC3-204ENST00000469207 TAC3Q9UHF0 121 aa11.65□□□□□ -0.54
HDAC3-204ENST00000469207 CSMD2Q7Z408 3487 aa11.64□□□□□ -0.55
HDAC3-204ENST00000469207 TRGV8A0A0C4DH27 118 aa11.64□□□□□ -0.55
HDAC3-204ENST00000469207 A0A1B0GUH1 482 aa11.64□□□□□ -0.55
HDAC3-204ENST00000469207 KPNA5O15131 536 aa11.64□□□□□ -0.55
HDAC3-204ENST00000469207 ZNHIT1O43257 154 aa11.64□□□□□ -0.55
HDAC3-204ENST00000469207 USP1O94782 785 aa11.64□□□□□ -0.55
HDAC3-204ENST00000469207 UNC5CO95185 931 aa11.64□□□□□ -0.55
HDAC3-204ENST00000469207 SERPINA7P05543 415 aa11.64□□□□□ -0.55
HDAC3-204ENST00000469207 CXCR2P25025 360 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms