RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 ATOH8Q96SQ7 321 aa4.58□□□□□ -1.68
XRN1-207ENST00000468894 VGLL1Q99990 258 aa4.58□□□□□ -1.68
XRN1-207ENST00000468894 MTMR12Q9C0I1 747 aa4.58□□□□□ -1.68
XRN1-207ENST00000468894 ST6GALNAC4Q9H4F1 302 aa4.58□□□□□ -1.68
XRN1-207ENST00000468894 TBC1D7Q9P0N9 293 aa4.58□□□□□ -1.68
XRN1-207ENST00000468894 CACNA1FO60840 1977 aa4.58□□□□□ -1.68
XRN1-207ENST00000468894 TRBV5-5A0A0J9YX44 114 aa4.57□□□□□ -1.68
XRN1-207ENST00000468894 MEX3AA1L020 520 aaKnown RBP4.57□□□□□ -1.68
XRN1-207ENST00000468894 CCL24O00175 119 aa4.57□□□□□ -1.68
XRN1-207ENST00000468894 MAGEC1O60732 1142 aa4.57□□□□□ -1.68
XRN1-207ENST00000468894 TBX10O75333 385 aa4.57□□□□□ -1.68
XRN1-207ENST00000468894 CRLF1O75462 422 aa4.57□□□□□ -1.68
XRN1-207ENST00000468894 BAG3O95817 575 aa4.57□□□□□ -1.68
XRN1-207ENST00000468894 GSRP00390 522 aa4.57□□□□□ -1.68
XRN1-207ENST00000468894 ZSCAN5DPP0CG00 497 aa4.57□□□□□ -1.68
XRN1-207ENST00000468894 KRT5P13647 590 aa4.57□□□□□ -1.68
XRN1-207ENST00000468894 KRTAP10-5P60370 271 aa4.57□□□□□ -1.68
XRN1-207ENST00000468894 LEKR1Q6ZMV7 388 aa4.57□□□□□ -1.68
XRN1-207ENST00000468894 STXBP4Q6ZWJ1 553 aa4.57□□□□□ -1.68
XRN1-207ENST00000468894 ZNF440Q8IYI8 595 aa4.57□□□□□ -1.68
XRN1-207ENST00000468894 SLC37A3Q8NCC5 494 aa4.57□□□□□ -1.68
XRN1-207ENST00000468894 PROX1Q92786 737 aa4.57□□□□□ -1.68
XRN1-207ENST00000468894 ZNF558Q96NG5 402 aa4.57□□□□□ -1.68
XRN1-207ENST00000468894 USP28Q96RU2 1077 aa4.57□□□□□ -1.68
XRN1-207ENST00000468894 CABLES2Q9BTV7 478 aa4.57□□□□□ -1.68
XRN1-207ENST00000468894 DGCR6LQ9BY27 220 aa4.57□□□□□ -1.68
XRN1-207ENST00000468894 TRIM15Q9C019 465 aa4.57□□□□□ -1.68
XRN1-207ENST00000468894 FZD8Q9H461 694 aa4.57□□□□□ -1.68
XRN1-207ENST00000468894 CLIC5Q9NZA1 410 aa4.57□□□□□ -1.68
XRN1-207ENST00000468894 TRAV24A0A0B4J272 114 aa4.56□□□□□ -1.68
XRN1-207ENST00000468894 SNURFLB1AK76 121 aa4.56□□□□□ -1.68
XRN1-207ENST00000468894 HMGB1P1B2RPK0 211 aaPredicted RBP4.56□□□□□ -1.68
XRN1-207ENST00000468894 C2CD4DB7Z1M9 353 aa4.56□□□□□ -1.68
XRN1-207ENST00000468894 SORBS2O94875 1100 aaKnown RBP4.56□□□□□ -1.68
XRN1-207ENST00000468894 ATP1B1P05026 303 aa4.56□□□□□ -1.68
XRN1-207ENST00000468894 DNA2P51530 1060 aa4.56□□□□□ -1.68
XRN1-207ENST00000468894 TRAP1Q12931 704 aaKnown RBP4.56□□□□□ -1.68
XRN1-207ENST00000468894 CATSPERDQ86XM0 798 aa4.56□□□□□ -1.68
XRN1-207ENST00000468894 CCDC191Q8NCU4 936 aa4.56□□□□□ -1.68
XRN1-207ENST00000468894 ZNF519Q8TB69 540 aa4.56□□□□□ -1.68
XRN1-207ENST00000468894 KCNE4Q8WWG9 221 aa4.56□□□□□ -1.68
XRN1-207ENST00000468894 RMDN1Q96DB5 314 aa4.56□□□□□ -1.68
XRN1-207ENST00000468894 IWS1Q96ST2 819 aa4.56□□□□□ -1.68
XRN1-207ENST00000468894 LPAR4Q99677 370 aa4.56□□□□□ -1.68
XRN1-207ENST00000468894 TRIM51Q9BSJ1 452 aa4.56□□□□□ -1.68
XRN1-207ENST00000468894 FAM49AQ9H0Q0 323 aaPredicted RBP4.56□□□□□ -1.68
XRN1-207ENST00000468894 PANK4Q9NVE7 773 aa4.56□□□□□ -1.68
XRN1-207ENST00000468894 PAK5Q9P286 719 aa4.56□□□□□ -1.68
XRN1-207ENST00000468894 CHKBQ9Y259 395 aa4.56□□□□□ -1.68
XRN1-207ENST00000468894 A0A087WUV0 522 aaPredicted RBP4.55□□□□□ -1.68
XRN1-207ENST00000468894 TEX28O15482 410 aa4.55□□□□□ -1.68
XRN1-207ENST00000468894 SNX3O60493 162 aa4.55□□□□□ -1.68
XRN1-207ENST00000468894 PLOD3O60568 738 aa4.55□□□□□ -1.68
XRN1-207ENST00000468894 GSCP56915 257 aaPredicted RBP4.55□□□□□ -1.68
XRN1-207ENST00000468894 RASGEF1BQ0VAM2 473 aa4.55□□□□□ -1.68
XRN1-207ENST00000468894 EFTUD2Q15029 972 aaKnown RBP eCLIP4.55□□□□□ -1.68
XRN1-207ENST00000468894 TCP11X2Q5H9J9 407 aa4.55□□□□□ -1.68
XRN1-207ENST00000468894 MFN1Q8IWA4 741 aa4.55□□□□□ -1.68
XRN1-207ENST00000468894 RYBPQ8N488 228 aaPredicted RBP4.55□□□□□ -1.68
XRN1-207ENST00000468894 CAMKVQ8NCB2 501 aa4.55□□□□□ -1.68
XRN1-207ENST00000468894 OR6S1Q8NH40 331 aa4.55□□□□□ -1.68
XRN1-207ENST00000468894 MAPK15Q8TD08 544 aa4.55□□□□□ -1.68
XRN1-207ENST00000468894 MRPS27Q92552 414 aaKnown RBP4.55□□□□□ -1.68
XRN1-207ENST00000468894 SLCO2A1Q92959 643 aa4.55□□□□□ -1.68
XRN1-207ENST00000468894 VPS33AQ96AX1 596 aa4.55□□□□□ -1.68
XRN1-207ENST00000468894 SPATA33Q96N06 139 aa4.55□□□□□ -1.68
XRN1-207ENST00000468894 SERINC2Q96SA4 455 aa4.55□□□□□ -1.68
XRN1-207ENST00000468894 NKX3-1Q99801 234 aaPredicted RBP4.55□□□□□ -1.68
XRN1-207ENST00000468894 PKP2Q99959 881 aa4.55□□□□□ -1.68
XRN1-207ENST00000468894 RBM4BQ9BQ04 359 aaKnown RBP4.55□□□□□ -1.68
XRN1-207ENST00000468894 RABEP2Q9H5N1 569 aa4.55□□□□□ -1.68
XRN1-207ENST00000468894 SPHK2Q9NRA0 654 aa4.55□□□□□ -1.68
XRN1-207ENST00000468894 GSN-AS1Q9NRJ2 163 aa4.55□□□□□ -1.68
XRN1-207ENST00000468894 TXNDC16Q9P2K2 825 aa4.55□□□□□ -1.68
XRN1-207ENST00000468894 CCL27Q9Y4X3 112 aa4.55□□□□□ -1.68
XRN1-207ENST00000468894 KRT33AO76009 404 aa4.54□□□□□ -1.68
XRN1-207ENST00000468894 HSPA4P34932 840 aa4.54□□□□□ -1.68
XRN1-207ENST00000468894 TAF6P49848 677 aa4.54□□□□□ -1.68
XRN1-207ENST00000468894 DLK1P80370 383 aa4.54□□□□□ -1.68
XRN1-207ENST00000468894 MZT1Q08AG7 82 aa4.54□□□□□ -1.68
XRN1-207ENST00000468894 CAMK2DQ13557 499 aa4.54□□□□□ -1.68
XRN1-207ENST00000468894 COG2Q14746 738 aa4.54□□□□□ -1.68
XRN1-207ENST00000468894 NONOQ15233 471 aaKnown RBP eCLIP4.54□□□□□ -1.68
XRN1-207ENST00000468894 FASTKD1Q53R41 847 aaKnown RBP4.54□□□□□ -1.68
XRN1-207ENST00000468894 WLSQ5T9L3 541 aa4.54□□□□□ -1.68
XRN1-207ENST00000468894 TRIM65Q6PJ69 517 aa4.54□□□□□ -1.68
XRN1-207ENST00000468894 GTSCR1Q86UQ5 136 aa4.54□□□□□ -1.68
XRN1-207ENST00000468894 CCDC89Q8N998 374 aa4.54□□□□□ -1.68
XRN1-207ENST00000468894 NOA1Q8NC60 698 aaKnown RBP4.54□□□□□ -1.68
XRN1-207ENST00000468894 OR7A2PQ8NGA2 310 aa4.54□□□□□ -1.68
XRN1-207ENST00000468894 PIK3R3Q92569 461 aa4.54□□□□□ -1.68
XRN1-207ENST00000468894 AGAP3Q96P47 875 aa4.54□□□□□ -1.68
XRN1-207ENST00000468894 SPAG5Q96R06 1193 aa4.54□□□□□ -1.68
XRN1-207ENST00000468894 ZNF300Q96RE9 604 aaPredicted RBP4.54□□□□□ -1.68
XRN1-207ENST00000468894 NAA11Q9BSU3 229 aaPredicted RBP4.54□□□□□ -1.68
XRN1-207ENST00000468894 SLC25A23Q9BV35 468 aa4.54□□□□□ -1.68
XRN1-207ENST00000468894 FAM129AQ9BZQ8 928 aa4.54□□□□□ -1.68
XRN1-207ENST00000468894 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.54□□□□□ -1.68
XRN1-207ENST00000468894 LIPGQ9Y5X9 500 aa4.54□□□□□ -1.68
XRN1-207ENST00000468894 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms