RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM5-209	ENST00000468872	FGF21	Q9NSA1	209 aa		4.63	□□□□□ -1.67
LSM5-209	ENST00000468872	FAM118A	Q9NWS6	357 aa		4.63	□□□□□ -1.67
LSM5-209	ENST00000468872	SEPT10	Q9P0V9	454 aa		4.63	□□□□□ -1.67
LSM5-209	ENST00000468872	LIPT1	Q9Y234	373 aa		4.63	□□□□□ -1.67
LSM5-209	ENST00000468872	DOCK7	Q96N67	2140 aa		4.63	□□□□□ -1.67
LSM5-209	ENST00000468872	AQR	O60306	1485 aa	Known RBP eCLIP	4.62	□□□□□ -1.67
LSM5-209	ENST00000468872	IFT140	Q96RY7	1462 aa		4.62	□□□□□ -1.67
LSM5-209	ENST00000468872	IGLV9-49	A0A0B4J1Y8	123 aa		4.62	□□□□□ -1.67
LSM5-209	ENST00000468872	OOEP	A6NGQ2	149 aa		4.62	□□□□□ -1.67
LSM5-209	ENST00000468872	YDJC	A8MPS7	323 aa		4.62	□□□□□ -1.67
LSM5-209	ENST00000468872	ATP6V0E1	O15342	81 aa		4.62	□□□□□ -1.67
LSM5-209	ENST00000468872	SNX3	O60493	162 aa		4.62	□□□□□ -1.67
LSM5-209	ENST00000468872	FMO6P	O60774	539 aa		4.62	□□□□□ -1.67
LSM5-209	ENST00000468872	MYL6B	P14649	208 aa		4.62	□□□□□ -1.67
LSM5-209	ENST00000468872	PAX1	P15863	534 aa		4.62	□□□□□ -1.67
LSM5-209	ENST00000468872	VAMP7	P51809	220 aa		4.62	□□□□□ -1.67
LSM5-209	ENST00000468872	PRELP	P51888	382 aa		4.62	□□□□□ -1.67
LSM5-209	ENST00000468872	KLC1	Q07866	573 aa		4.62	□□□□□ -1.67
LSM5-209	ENST00000468872	NONO	Q15233	471 aa	Known RBP eCLIP	4.62	□□□□□ -1.67
LSM5-209	ENST00000468872	PHKG1	Q16816	387 aa		4.62	□□□□□ -1.67
LSM5-209	ENST00000468872	ZNF674	Q2M3X9	581 aa		4.62	□□□□□ -1.67
LSM5-209	ENST00000468872	SLC10A5	Q5PT55	438 aa		4.62	□□□□□ -1.67
LSM5-209	ENST00000468872	ZNF449	Q6P9G9	518 aa		4.62	□□□□□ -1.67
LSM5-209	ENST00000468872	C19orf48	Q6RUI8	117 aa		4.62	□□□□□ -1.67
LSM5-209	ENST00000468872	NHLRC1	Q6VVB1	395 aa		4.62	□□□□□ -1.67
LSM5-209	ENST00000468872	ANKRD33	Q7Z3H0	272 aa		4.62	□□□□□ -1.67
LSM5-209	ENST00000468872	ISCA2	Q86U28	154 aa		4.62	□□□□□ -1.67
LSM5-209	ENST00000468872	SYCP3	Q8IZU3	236 aa		4.62	□□□□□ -1.67
LSM5-209	ENST00000468872	TMCO5A	Q8N6Q1	288 aa		4.62	□□□□□ -1.67
LSM5-209	ENST00000468872	ZNF713	Q8N859	430 aa	Predicted RBP	4.62	□□□□□ -1.67
LSM5-209	ENST00000468872	ZNF383	Q8NA42	475 aa		4.62	□□□□□ -1.67
LSM5-209	ENST00000468872	DBF4B	Q8NFT6	615 aa		4.62	□□□□□ -1.67
LSM5-209	ENST00000468872	P2RX5	Q93086	422 aa		4.62	□□□□□ -1.67
LSM5-209	ENST00000468872	PTP4A1	Q93096	173 aa		4.62	□□□□□ -1.67
LSM5-209	ENST00000468872	NODAL	Q96S42	347 aa		4.62	□□□□□ -1.67
LSM5-209	ENST00000468872	FUT8	Q9BYC5	575 aa		4.62	□□□□□ -1.67
LSM5-209	ENST00000468872	SNX25	Q9H3E2	840 aa		4.62	□□□□□ -1.67
LSM5-209	ENST00000468872	MMADHC	Q9H3L0	296 aa	Predicted RBP	4.62	□□□□□ -1.67
LSM5-209	ENST00000468872	BICC1	Q9H694	974 aa	Known RBP	4.62	□□□□□ -1.67
LSM5-209	ENST00000468872	TRPV4	Q9HBA0	871 aa		4.62	□□□□□ -1.67
LSM5-209	ENST00000468872	ECHDC1	Q9NTX5	307 aa		4.62	□□□□□ -1.67
LSM5-209	ENST00000468872	C2orf81	A6NN90	581 aa		4.61	□□□□□ -1.67
LSM5-209	ENST00000468872	BMPR1B	O00238	502 aa		4.61	□□□□□ -1.67
LSM5-209	ENST00000468872	P2RY10	O00398	339 aa		4.61	□□□□□ -1.67
LSM5-209	ENST00000468872	FLRT2	O43155	660 aa		4.61	□□□□□ -1.67
LSM5-209	ENST00000468872	DDHD2	O94830	711 aa		4.61	□□□□□ -1.67
LSM5-209	ENST00000468872	IGHV4-31	P0DP07	118 aa		4.61	□□□□□ -1.67
LSM5-209	ENST00000468872	VDR	P11473	427 aa		4.61	□□□□□ -1.67
LSM5-209	ENST00000468872	EEF2	P13639	858 aa	Known RBP	4.61	□□□□□ -1.67
LSM5-209	ENST00000468872	MAZ	P56270	477 aa	Known RBP	4.61	□□□□□ -1.67
LSM5-209	ENST00000468872	RBBP5	Q15291	538 aa	Known RBP	4.61	□□□□□ -1.67
LSM5-209	ENST00000468872	OR4A47	Q6IF82	309 aa		4.61	□□□□□ -1.67
LSM5-209	ENST00000468872	IYD	Q6PHW0	289 aa		4.61	□□□□□ -1.67
LSM5-209	ENST00000468872	BTNL8	Q6UX41	500 aa		4.61	□□□□□ -1.67
LSM5-209	ENST00000468872	CCDC91	Q7Z6B0	441 aa		4.61	□□□□□ -1.67
LSM5-209	ENST00000468872	NDUFAF2	Q8N183	169 aa		4.61	□□□□□ -1.67
LSM5-209	ENST00000468872	PYCR2	Q96C36	320 aa		4.61	□□□□□ -1.67
LSM5-209	ENST00000468872	SENP5	Q96HI0	755 aa	Predicted RBP	4.61	□□□□□ -1.67
LSM5-209	ENST00000468872	UTP14A	Q9BVJ6	771 aa	Known RBP	4.61	□□□□□ -1.67
LSM5-209	ENST00000468872	OR2B2	Q9GZK3	357 aa		4.61	□□□□□ -1.67
LSM5-209	ENST00000468872	ZMYND12	Q9H0C1	365 aa		4.61	□□□□□ -1.67
LSM5-209	ENST00000468872	SHARPIN	Q9H0F6	387 aa		4.61	□□□□□ -1.67
LSM5-209	ENST00000468872	TUFT1	Q9NNX1	390 aa		4.61	□□□□□ -1.67
LSM5-209	ENST00000468872	FAM207A	Q9NSI2	230 aa	Predicted RBP	4.61	□□□□□ -1.67
LSM5-209	ENST00000468872	YEATS2	Q9ULM3	1422 aa		4.61	□□□□□ -1.67
LSM5-209	ENST00000468872	MAPKBP1	O60336	1514 aa		4.61	□□□□□ -1.67
LSM5-209	ENST00000468872	SYNJ1	O43426	1573 aa		4.61	□□□□□ -1.67
LSM5-209	ENST00000468872	KIF21B	O75037	1637 aa		4.61	□□□□□ -1.67
LSM5-209	ENST00000468872	ADAMTSL3	P82987	1691 aa		4.61	□□□□□ -1.67
LSM5-209	ENST00000468872	CCL24	O00175	119 aa		4.6	□□□□□ -1.67
LSM5-209	ENST00000468872	FGF17	O60258	216 aa		4.6	□□□□□ -1.67
LSM5-209	ENST00000468872	CIDEA	O60543	219 aa		4.6	□□□□□ -1.67
LSM5-209	ENST00000468872	SOCS5	O75159	536 aa		4.6	□□□□□ -1.67
LSM5-209	ENST00000468872	SERPING1	P05155	500 aa		4.6	□□□□□ -1.67
LSM5-209	ENST00000468872	ANKRD34C	P0C6C1	535 aa		4.6	□□□□□ -1.67
LSM5-209	ENST00000468872	EPOR	P19235	508 aa		4.6	□□□□□ -1.67
LSM5-209	ENST00000468872	CA6	P23280	308 aa		4.6	□□□□□ -1.67
LSM5-209	ENST00000468872	SOAT1	P35610	550 aa		4.6	□□□□□ -1.67
LSM5-209	ENST00000468872	CDX1	P47902	265 aa	Predicted RBP	4.6	□□□□□ -1.67
LSM5-209	ENST00000468872	GCNT1	Q02742	428 aa		4.6	□□□□□ -1.67
LSM5-209	ENST00000468872	C17orf67	Q0P5P2	114 aa		4.6	□□□□□ -1.67
LSM5-209	ENST00000468872	GPR17	Q13304	367 aa		4.6	□□□□□ -1.67
LSM5-209	ENST00000468872	HERC3	Q15034	1050 aa		4.6	□□□□□ -1.67
LSM5-209	ENST00000468872	LYSMD4	Q5XG99	296 aa		4.6	□□□□□ -1.67
LSM5-209	ENST00000468872	FAM166A	Q6J272	317 aa		4.6	□□□□□ -1.67
LSM5-209	ENST00000468872	RBMS3	Q6XE24	437 aa	Known RBP	4.6	□□□□□ -1.67
LSM5-209	ENST00000468872	MEX3B	Q6ZN04	569 aa	Known RBP	4.6	□□□□□ -1.67
LSM5-209	ENST00000468872	TUSC5	Q8IXB3	177 aa		4.6	□□□□□ -1.67
LSM5-209	ENST00000468872	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	4.6	□□□□□ -1.67
LSM5-209	ENST00000468872	KBTBD8	Q8NFY9	601 aa		4.6	□□□□□ -1.67
LSM5-209	ENST00000468872	SEPT1	Q8WYJ6	367 aa		4.6	□□□□□ -1.67
LSM5-209	ENST00000468872	TM9SF4	Q92544	642 aa		4.6	□□□□□ -1.67
LSM5-209	ENST00000468872	MAP3K3	Q99759	626 aa		4.6	□□□□□ -1.67
LSM5-209	ENST00000468872	MMP28	Q9H239	520 aa		4.6	□□□□□ -1.67
LSM5-209	ENST00000468872	TMEM206	Q9H813	350 aa		4.6	□□□□□ -1.67
LSM5-209	ENST00000468872	SDF2L1	Q9HCN8	221 aa		4.6	□□□□□ -1.67
LSM5-209	ENST00000468872	RAB9B	Q9NP90	201 aa		4.6	□□□□□ -1.67
LSM5-209	ENST00000468872	PHPT1	Q9NRX4	125 aa	Predicted RBP	4.6	□□□□□ -1.67
LSM5-209	ENST00000468872	P4HTM	Q9NXG6	502 aa		4.6	□□□□□ -1.67
LSM5-209	ENST00000468872	LEF1	Q9UJU2	399 aa	Predicted RBP	4.6	□□□□□ -1.67

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