RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 CSN2P05814 226 aa8.5□□□□□ -1.05
HPS4-209ENST00000466781 GPIP06744 558 aa8.5□□□□□ -1.05
HPS4-209ENST00000466781 MMP8P22894 467 aa8.5□□□□□ -1.05
HPS4-209ENST00000466781 PRDX6P30041 224 aa8.5□□□□□ -1.05
HPS4-209ENST00000466781 DNAJA1P31689 397 aaKnown RBP8.5□□□□□ -1.05
HPS4-209ENST00000466781 MSX2P35548 267 aaPredicted RBP8.5□□□□□ -1.05
HPS4-209ENST00000466781 EIF5AP63241 154 aaKnown RBP8.5□□□□□ -1.05
HPS4-209ENST00000466781 HYAL2Q12891 473 aa8.5□□□□□ -1.05
HPS4-209ENST00000466781 PRPF38BQ5VTL8 546 aaKnown RBP8.5□□□□□ -1.05
HPS4-209ENST00000466781 ZNF782Q6ZMW2 699 aaPredicted RBP8.5□□□□□ -1.05
HPS4-209ENST00000466781 SSX6Q7RTT6 188 aa8.5□□□□□ -1.05
HPS4-209ENST00000466781 FUKQ8N0W3 1084 aa8.5□□□□□ -1.05
HPS4-209ENST00000466781 CNTD1Q8N815 330 aa8.5□□□□□ -1.05
HPS4-209ENST00000466781 YIPF7Q8N8F6 280 aa8.5□□□□□ -1.05
HPS4-209ENST00000466781 ZNF784Q8NCA9 323 aaPredicted RBP8.5□□□□□ -1.05
HPS4-209ENST00000466781 OR4C15Q8NGM1 316 aa8.5□□□□□ -1.05
HPS4-209ENST00000466781 POF1BQ8WVV4 589 aa8.5□□□□□ -1.05
HPS4-209ENST00000466781 LPGAT1Q92604 370 aa8.5□□□□□ -1.05
HPS4-209ENST00000466781 MR1Q95460 341 aa8.5□□□□□ -1.05
HPS4-209ENST00000466781 MFSD3Q96ES6 412 aa8.5□□□□□ -1.05
HPS4-209ENST00000466781 WDR77Q9BQA1 342 aaPredicted RBP8.5□□□□□ -1.05
HPS4-209ENST00000466781 ORAI3Q9BRQ5 295 aa8.5□□□□□ -1.05
HPS4-209ENST00000466781 SDCBP2Q9H190 292 aa8.5□□□□□ -1.05
HPS4-209ENST00000466781 BCAS3Q9H6U6 928 aa8.5□□□□□ -1.05
HPS4-209ENST00000466781 LRRC4CQ9HCJ2 640 aa8.5□□□□□ -1.05
HPS4-209ENST00000466781 Q9N2J8 555 aa8.5□□□□□ -1.05
HPS4-209ENST00000466781 ITGB1BP2Q9UKP3 347 aa8.5□□□□□ -1.05
HPS4-209ENST00000466781 RIMKLBQ9ULI2 386 aa8.5□□□□□ -1.05
HPS4-209ENST00000466781 YIPF1Q9Y548 306 aa8.5□□□□□ -1.05
HPS4-209ENST00000466781 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.5□□□□□ -1.05
HPS4-209ENST00000466781 FAM221BA6H8Z2 402 aa8.5□□□□□ -1.05
HPS4-209ENST00000466781 SAGE2PA6NJ88 616 aa8.5□□□□□ -1.05
HPS4-209ENST00000466781 EIF1AYO14602 144 aaKnown RBP8.5□□□□□ -1.05
HPS4-209ENST00000466781 NPHS1O60500 1241 aa8.5□□□□□ -1.05
HPS4-209ENST00000466781 PRKCGP05129 697 aa8.5□□□□□ -1.05
HPS4-209ENST00000466781 MYCLP1P12525 358 aaPredicted RBP8.5□□□□□ -1.05
HPS4-209ENST00000466781 NCK1P16333 377 aa8.5□□□□□ -1.05
HPS4-209ENST00000466781 ZNF16P17020 682 aaPredicted RBP8.5□□□□□ -1.05
HPS4-209ENST00000466781 TM4SF4P48230 202 aa8.5□□□□□ -1.05
HPS4-209ENST00000466781 LILRA4P59901 499 aa8.5□□□□□ -1.05
HPS4-209ENST00000466781 PPM1JQ5JR12 505 aa8.5□□□□□ -1.05
HPS4-209ENST00000466781 PAOXQ6QHF9 649 aa8.5□□□□□ -1.05
HPS4-209ENST00000466781 RAB11FIP2Q7L804 512 aa8.5□□□□□ -1.05
HPS4-209ENST00000466781 MREGQ8N565 214 aa8.5□□□□□ -1.05
HPS4-209ENST00000466781 NAXEQ8NCW5 288 aa8.5□□□□□ -1.05
HPS4-209ENST00000466781 BCO2Q9BYV7 579 aa8.5□□□□□ -1.05
HPS4-209ENST00000466781 SPATA7Q9P0W8 599 aa8.5□□□□□ -1.05
HPS4-209ENST00000466781 PLEKHA6Q9Y2H5 1048 aa8.5□□□□□ -1.05
HPS4-209ENST00000466781 AGPSO00116 658 aa8.5□□□□□ -1.05
HPS4-209ENST00000466781 ERI3O43414 337 aaKnown RBP8.5□□□□□ -1.05
HPS4-209ENST00000466781 HCKP08631 526 aa8.5□□□□□ -1.05
HPS4-209ENST00000466781 ITGA5P08648 1049 aa8.5□□□□□ -1.05
HPS4-209ENST00000466781 SEPHS1P49903 392 aa8.5□□□□□ -1.05
HPS4-209ENST00000466781 SEMG2Q02383 582 aa8.5□□□□□ -1.05
HPS4-209ENST00000466781 SCN1BQ07699 218 aa8.5□□□□□ -1.05
HPS4-209ENST00000466781 SPIN4Q56A73 249 aa8.5□□□□□ -1.05
HPS4-209ENST00000466781 FUBP3Q96I24 572 aaKnown RBP eCLIP8.5□□□□□ -1.05
HPS4-209ENST00000466781 CIB1Q99828 191 aa8.5□□□□□ -1.05
HPS4-209ENST00000466781 SLC35A5Q9BS91 424 aa8.5□□□□□ -1.05
HPS4-209ENST00000466781 PTGES2Q9H7Z7 377 aa8.5□□□□□ -1.05
HPS4-209ENST00000466781 C14orf166Q9Y224 244 aaKnown RBP8.5□□□□□ -1.05
HPS4-209ENST00000466781 OR2AT4A6NND4 320 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 VEGFDO43915 354 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 EDF1O60869 148 aaKnown RBP8.49□□□□□ -1.05
HPS4-209ENST00000466781 SCGB2A1O75556 95 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 SRCP12931 536 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 XKP51811 444 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 DSTNP60981 165 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 FAM189A2Q15884 450 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 DPY19L1Q2PZI1 675 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 LPCAT4Q643R3 524 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 ANO7Q6IWH7 933 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 CMTR2Q8IYT2 770 aaKnown RBP8.49□□□□□ -1.05
HPS4-209ENST00000466781 OR52E4Q8NGH9 312 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 AKAP1Q92667 903 aaKnown RBP eCLIP8.49□□□□□ -1.05
HPS4-209ENST00000466781 ZNF471Q9BX82 626 aaPredicted RBP8.49□□□□□ -1.05
HPS4-209ENST00000466781 TTYH1Q9H313 450 aaPredicted RBP8.49□□□□□ -1.05
HPS4-209ENST00000466781 FZD8Q9H461 694 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 RAB26Q9ULW5 256 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 STRCQ7RTU9 1775 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 MYBPHLA2RUH7 354 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 AIREO43918 545 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 TRMUO75648 421 aaKnown RBP8.49□□□□□ -1.05
HPS4-209ENST00000466781 RPLP0P05388 317 aaKnown RBP8.49□□□□□ -1.05
HPS4-209ENST00000466781 SRPRAP08240 638 aaKnown RBP8.49□□□□□ -1.05
HPS4-209ENST00000466781 ACSL1P33121 698 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 KCNJ2P63252 427 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 BNIP1Q12981 228 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 HNRNPDQ14103 355 aaKnown RBP8.49□□□□□ -1.05
HPS4-209ENST00000466781 ZNF460Q14592 562 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 C17orf99Q6UX52 265 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 ADGRD2Q7Z7M1 963 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 OR6N1Q8NGY5 312 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 MTERF1Q99551 399 aaKnown RBP8.49□□□□□ -1.05
HPS4-209ENST00000466781 ITM2CQ9NQX7 267 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 ARL8BQ9NVJ2 186 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 MAU2Q9Y6X3 613 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 A0A1W2PRQ8 180 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 SMCO3A2RU48 225 aa8.49□□□□□ -1.05
HPS4-209ENST00000466781 PLOD2O00469 737 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms