RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 SAE1Q9UBE0 346 aaPredicted RBP7.31□□□□□ -1.24
SMC3-202ENST00000462899 PRSS21Q9Y6M0 314 aa7.31□□□□□ -1.24
SMC3-202ENST00000462899 SCN3AQ9NY46 2000 aa7.3□□□□□ -1.24
SMC3-202ENST00000462899 EML6Q6ZMW3 1958 aa7.3□□□□□ -1.24
SMC3-202ENST00000462899 HYKKA2RU49 373 aa7.3□□□□□ -1.24
SMC3-202ENST00000462899 C2orf81A6NN90 581 aa7.3□□□□□ -1.24
SMC3-202ENST00000462899 TARM1B6A8C7 271 aa7.3□□□□□ -1.24
SMC3-202ENST00000462899 CCL22O00626 93 aa7.3□□□□□ -1.24
SMC3-202ENST00000462899 ASNA1O43681 348 aa7.3□□□□□ -1.24
SMC3-202ENST00000462899 SRPX2O60687 465 aaPredicted RBP7.3□□□□□ -1.24
SMC3-202ENST00000462899 AP2A2O94973 939 aa7.3□□□□□ -1.24
SMC3-202ENST00000462899 FKBP9O95302 570 aa7.3□□□□□ -1.24
SMC3-202ENST00000462899 AGTP01019 485 aa7.3□□□□□ -1.24
SMC3-202ENST00000462899 ZFXP17010 805 aaPredicted RBP7.3□□□□□ -1.24
SMC3-202ENST00000462899 ITGALP20701 1170 aa7.3□□□□□ -1.24
SMC3-202ENST00000462899 PSMA3P25788 255 aa7.3□□□□□ -1.24
SMC3-202ENST00000462899 MC4RP32245 332 aa7.3□□□□□ -1.24
SMC3-202ENST00000462899 SLC26A3P40879 764 aa7.3□□□□□ -1.24
SMC3-202ENST00000462899 GRIA3P42263 894 aa7.3□□□□□ -1.24
SMC3-202ENST00000462899 NR2C2P49116 596 aa7.3□□□□□ -1.24
SMC3-202ENST00000462899 ADAM8P78325 824 aa7.3□□□□□ -1.24
SMC3-202ENST00000462899 HSF1Q00613 529 aa7.3□□□□□ -1.24
SMC3-202ENST00000462899 ALDH6A1Q02252 535 aaKnown RBP7.3□□□□□ -1.24
SMC3-202ENST00000462899 OCA2Q04671 838 aa7.3□□□□□ -1.24
SMC3-202ENST00000462899 LTBQ06643 244 aa7.3□□□□□ -1.24
SMC3-202ENST00000462899 TUBA3CQ13748 450 aa7.3□□□□□ -1.24
SMC3-202ENST00000462899 FAM214AQ32MH5 1076 aa7.3□□□□□ -1.24
SMC3-202ENST00000462899 ZC3H12BQ5HYM0 836 aaKnown RBP7.3□□□□□ -1.24
SMC3-202ENST00000462899 WASHC2DQ5SRD0 308 aa7.3□□□□□ -1.24
SMC3-202ENST00000462899 DENND5AQ6IQ26 1287 aa7.3□□□□□ -1.24
SMC3-202ENST00000462899 TUBA3EQ6PEY2 450 aa7.3□□□□□ -1.24
SMC3-202ENST00000462899 PACS1Q6VY07 963 aa7.3□□□□□ -1.24
SMC3-202ENST00000462899 C3P1Q6ZMU1 363 aa7.3□□□□□ -1.24
SMC3-202ENST00000462899 SERPINA9Q86WD7 417 aa7.3□□□□□ -1.24
SMC3-202ENST00000462899 KLHDC8BQ8IXV7 354 aa7.3□□□□□ -1.24
SMC3-202ENST00000462899 PRSS58Q8IYP2 241 aa7.3□□□□□ -1.24
SMC3-202ENST00000462899 ALDH16A1Q8IZ83 802 aa7.3□□□□□ -1.24
SMC3-202ENST00000462899 BEST3Q8N1M1 668 aa7.3□□□□□ -1.24
SMC3-202ENST00000462899 GHDCQ8N2G8 530 aa7.3□□□□□ -1.24
SMC3-202ENST00000462899 DNAAF3Q8N9W5 541 aa7.3□□□□□ -1.24
SMC3-202ENST00000462899 LILRB4Q8NHJ6 448 aa7.3□□□□□ -1.24
SMC3-202ENST00000462899 SUN3Q8TAQ9 357 aa7.3□□□□□ -1.24
SMC3-202ENST00000462899 TFB1MQ8WVM0 346 aaKnown RBP7.3□□□□□ -1.24
SMC3-202ENST00000462899 ALPK1Q96QP1 1244 aa7.3□□□□□ -1.24
SMC3-202ENST00000462899 VAT1Q99536 393 aa7.3□□□□□ -1.24
SMC3-202ENST00000462899 LIME1Q9H400 295 aa7.3□□□□□ -1.24
SMC3-202ENST00000462899 C14orf105Q9NVL8 296 aa7.3□□□□□ -1.24
SMC3-202ENST00000462899 ST6GALNAC2Q9UJ37 374 aa7.3□□□□□ -1.24
SMC3-202ENST00000462899 TDRKHQ9Y2W6 561 aaKnown RBP7.3□□□□□ -1.24
SMC3-202ENST00000462899 MPDZO75970 2070 aa7.3□□□□□ -1.24
SMC3-202ENST00000462899 LOC105369274A0A096LPK9 316 aa7.29□□□□□ -1.24
SMC3-202ENST00000462899 LOC102723532A0A0G2JNH3 316 aa7.29□□□□□ -1.24
SMC3-202ENST00000462899 NKX2-6A6NCS4 301 aa7.29□□□□□ -1.24
SMC3-202ENST00000462899 KIAA1324LA8MWY0 1029 aaPredicted RBP7.29□□□□□ -1.24
SMC3-202ENST00000462899 NPIPA5E9PKD4 350 aa7.29□□□□□ -1.24
SMC3-202ENST00000462899 TTI1O43156 1089 aa7.29□□□□□ -1.24
SMC3-202ENST00000462899 NEURL1O76050 574 aa7.29□□□□□ -1.24
SMC3-202ENST00000462899 TSPAN12O95859 305 aa7.29□□□□□ -1.24
SMC3-202ENST00000462899 CD9P21926 228 aa7.29□□□□□ -1.24
SMC3-202ENST00000462899 FBLP22087 321 aaKnown RBP7.29□□□□□ -1.24
SMC3-202ENST00000462899 LORP23490 312 aaPredicted RBP7.29□□□□□ -1.24
SMC3-202ENST00000462899 CDKN2BP42772 138 aa7.29□□□□□ -1.24
SMC3-202ENST00000462899 EMP2P54851 167 aa7.29□□□□□ -1.24
SMC3-202ENST00000462899 VSX2P58304 361 aaPredicted RBP7.29□□□□□ -1.24
SMC3-202ENST00000462899 AP2B1P63010 937 aa7.29□□□□□ -1.24
SMC3-202ENST00000462899 PPP2R2AP63151 447 aa7.29□□□□□ -1.24
SMC3-202ENST00000462899 SNRPNP63162 240 aaKnown RBP7.29□□□□□ -1.24
SMC3-202ENST00000462899 ZNF33BQ06732 778 aa7.29□□□□□ -1.24
SMC3-202ENST00000462899 TFDP3Q5H9I0 405 aa7.29□□□□□ -1.24
SMC3-202ENST00000462899 ACER2Q5QJU3 275 aa7.29□□□□□ -1.24
SMC3-202ENST00000462899 ABHD17BQ5VST6 288 aa7.29□□□□□ -1.24
SMC3-202ENST00000462899 PLAG1Q6DJT9 500 aa7.29□□□□□ -1.24
SMC3-202ENST00000462899 ALKBH5Q6P6C2 394 aaKnown RBP7.29□□□□□ -1.24
SMC3-202ENST00000462899 MFSD7Q6UXD7 560 aa7.29□□□□□ -1.24
SMC3-202ENST00000462899 NAPRTQ6XQN6 538 aa7.29□□□□□ -1.24
SMC3-202ENST00000462899 BIVMQ86UB2 503 aa7.29□□□□□ -1.24
SMC3-202ENST00000462899 TMEM200AQ86VY9 491 aa7.29□□□□□ -1.24
SMC3-202ENST00000462899 KRTAP1-3Q8IUG1 177 aa7.29□□□□□ -1.24
SMC3-202ENST00000462899 VRK3Q8IV63 474 aa7.29□□□□□ -1.24
SMC3-202ENST00000462899 ZC3H7AQ8IWR0 971 aaKnown RBP7.29□□□□□ -1.24
SMC3-202ENST00000462899 SLC22A15Q8IZD6 547 aa7.29□□□□□ -1.24
SMC3-202ENST00000462899 OR4N4Q8N0Y3 316 aa7.29□□□□□ -1.24
SMC3-202ENST00000462899 OR2L8Q8NGY9 312 aa7.29□□□□□ -1.24
SMC3-202ENST00000462899 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.29□□□□□ -1.24
SMC3-202ENST00000462899 SYN2Q92777 582 aaPredicted RBP7.29□□□□□ -1.24
SMC3-202ENST00000462899 ZUFSPQ96AP4 578 aa7.29□□□□□ -1.24
SMC3-202ENST00000462899 SLC22A18Q96BI1 424 aa7.29□□□□□ -1.24
SMC3-202ENST00000462899 MBD6Q96DN6 1003 aa7.29□□□□□ -1.24
SMC3-202ENST00000462899 MVB12AQ96EY5 273 aa7.29□□□□□ -1.24
SMC3-202ENST00000462899 DNAJC1Q96KC8 554 aaKnown RBP7.29□□□□□ -1.24
SMC3-202ENST00000462899 IL17FQ96PD4 163 aa7.29□□□□□ -1.24
SMC3-202ENST00000462899 QKIQ96PU8 341 aaKnown RBP eCLIP7.29□□□□□ -1.24
SMC3-202ENST00000462899 SMR3AQ99954 134 aa7.29□□□□□ -1.24
SMC3-202ENST00000462899 ZNF559Q9BR84 538 aa7.29□□□□□ -1.24
SMC3-202ENST00000462899 TUBB6Q9BUF5 446 aa7.29□□□□□ -1.24
SMC3-202ENST00000462899 FSD1LQ9BXM9 530 aa7.29□□□□□ -1.24
SMC3-202ENST00000462899 PACSIN1Q9BY11 444 aa7.29□□□□□ -1.24
SMC3-202ENST00000462899 GBA3Q9H227 469 aa7.29□□□□□ -1.24
SMC3-202ENST00000462899 ARNT2Q9HBZ2 717 aa7.29□□□□□ -1.24
SMC3-202ENST00000462899 STMN3Q9NZ72 180 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms