RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 APCDD1Q8J025 514 aa3.05□□□□□ -1.92
RFC4-211ENST00000460408 LGI2Q8N0V4 545 aa3.05□□□□□ -1.92
RFC4-211ENST00000460408 NDUFAF2Q8N183 169 aa3.05□□□□□ -1.92
RFC4-211ENST00000460408 RYBPQ8N488 228 aaPredicted RBP3.05□□□□□ -1.92
RFC4-211ENST00000460408 HPSE2Q8WWQ2 592 aa3.05□□□□□ -1.92
RFC4-211ENST00000460408 P2RX5Q93086 422 aa3.05□□□□□ -1.92
RFC4-211ENST00000460408 ZNF501Q96CX3 271 aaPredicted RBP3.05□□□□□ -1.92
RFC4-211ENST00000460408 JAKMIP1Q96N16 626 aaKnown RBP3.05□□□□□ -1.92
RFC4-211ENST00000460408 MAP3K3Q99759 626 aa3.05□□□□□ -1.92
RFC4-211ENST00000460408 URM1Q9BTM9 101 aaKnown RBP3.05□□□□□ -1.92
RFC4-211ENST00000460408 GTPBP2Q9BX10 602 aaKnown RBP3.05□□□□□ -1.92
RFC4-211ENST00000460408 PRRG4Q9BZD6 226 aa3.05□□□□□ -1.92
RFC4-211ENST00000460408 ZMYND12Q9H0C1 365 aa3.05□□□□□ -1.92
RFC4-211ENST00000460408 CPVLQ9H3G5 476 aa3.05□□□□□ -1.92
RFC4-211ENST00000460408 GRPEL1Q9HAV7 217 aa3.05□□□□□ -1.92
RFC4-211ENST00000460408 SLC52A3Q9NQ40 469 aa3.05□□□□□ -1.92
RFC4-211ENST00000460408 FAM207AQ9NSI2 230 aaPredicted RBP3.05□□□□□ -1.92
RFC4-211ENST00000460408 P4HTMQ9NXG6 502 aa3.05□□□□□ -1.92
RFC4-211ENST00000460408 RASAL2Q9UJF2 1139 aa3.05□□□□□ -1.92
RFC4-211ENST00000460408 NOL7Q9UMY1 257 aaKnown RBP3.05□□□□□ -1.92
RFC4-211ENST00000460408 KCNK7Q9Y2U2 307 aa3.05□□□□□ -1.92
RFC4-211ENST00000460408 LTBP4Q8N2S1 1624 aa3.04□□□□□ -1.92
RFC4-211ENST00000460408 FAM72CH0Y354 149 aa3.04□□□□□ -1.92
RFC4-211ENST00000460408 BLOC1S5-TXNDC5H3BN57 136 aa3.04□□□□□ -1.92
RFC4-211ENST00000460408 IFIT3O14879 490 aaKnown RBP3.04□□□□□ -1.92
RFC4-211ENST00000460408 SNX3O60493 162 aa3.04□□□□□ -1.92
RFC4-211ENST00000460408 PRAF2O60831 178 aa3.04□□□□□ -1.92
RFC4-211ENST00000460408 SP1P08047 785 aa3.04□□□□□ -1.92
RFC4-211ENST00000460408 VIMP08670 466 aaKnown RBP3.04□□□□□ -1.92
RFC4-211ENST00000460408 CD48P09326 243 aa3.04□□□□□ -1.92
RFC4-211ENST00000460408 PATE4P0C8F1 98 aa3.04□□□□□ -1.92
RFC4-211ENST00000460408 PRSS56P0CW18 603 aa3.04□□□□□ -1.92
RFC4-211ENST00000460408 SPP1P10451 314 aa3.04□□□□□ -1.92
RFC4-211ENST00000460408 LBPP18428 481 aa3.04□□□□□ -1.92
RFC4-211ENST00000460408 MUTP22033 750 aa3.04□□□□□ -1.92
RFC4-211ENST00000460408 PSMB4P28070 264 aa3.04□□□□□ -1.92
RFC4-211ENST00000460408 CSTF2P33240 577 aaKnown RBP eCLIP3.04□□□□□ -1.92
RFC4-211ENST00000460408 CDX1P47902 265 aaPredicted RBP3.04□□□□□ -1.92
RFC4-211ENST00000460408 ILF2Q12905 390 aaKnown RBP3.04□□□□□ -1.92
RFC4-211ENST00000460408 RRS1Q15050 365 aaKnown RBP3.04□□□□□ -1.92
RFC4-211ENST00000460408 MEP1BQ16820 701 aa3.04□□□□□ -1.92
RFC4-211ENST00000460408 TYSND1Q2T9J0 566 aa3.04□□□□□ -1.92
RFC4-211ENST00000460408 TWISTNBQ3B726 338 aaPredicted RBP3.04□□□□□ -1.92
RFC4-211ENST00000460408 SLC35D3Q5M8T2 416 aa3.04□□□□□ -1.92
RFC4-211ENST00000460408 C20orf194Q5TEA3 1177 aa3.04□□□□□ -1.92
RFC4-211ENST00000460408 FAM72AQ5TYM5 149 aa3.04□□□□□ -1.92
RFC4-211ENST00000460408 ARHGAP17Q68EM7 881 aa3.04□□□□□ -1.92
RFC4-211ENST00000460408 FAM72DQ6L9T8 149 aa3.04□□□□□ -1.92
RFC4-211ENST00000460408 BTNL8Q6UX41 500 aa3.04□□□□□ -1.92
RFC4-211ENST00000460408 MSANTD1Q6ZTZ1 278 aa3.04□□□□□ -1.92
RFC4-211ENST00000460408 SLC16A9Q7RTY1 509 aa3.04□□□□□ -1.92
RFC4-211ENST00000460408 SPATA21Q7Z572 469 aa3.04□□□□□ -1.92
RFC4-211ENST00000460408 FAM72BQ86X60 149 aa3.04□□□□□ -1.92
RFC4-211ENST00000460408 SIX6OS1Q8N1H7 587 aa3.04□□□□□ -1.92
RFC4-211ENST00000460408 OR2T11Q8NH01 316 aa3.04□□□□□ -1.92
RFC4-211ENST00000460408 OR4C3Q8NH37 302 aa3.04□□□□□ -1.92
RFC4-211ENST00000460408 SEPT1Q8WYJ6 367 aa3.04□□□□□ -1.92
RFC4-211ENST00000460408 DNASE1L2Q92874 299 aa3.04□□□□□ -1.92
RFC4-211ENST00000460408 TMEM143Q96AN5 459 aa3.04□□□□□ -1.92
RFC4-211ENST00000460408 HES6Q96HZ4 224 aa3.04□□□□□ -1.92
RFC4-211ENST00000460408 PIGQQ9BRB3 760 aa3.04□□□□□ -1.92
RFC4-211ENST00000460408 ALDH8A1Q9H2A2 487 aaPredicted RBP3.04□□□□□ -1.92
RFC4-211ENST00000460408 ACTL8Q9H568 366 aa3.04□□□□□ -1.92
RFC4-211ENST00000460408 ZNF71Q9NQZ8 489 aaPredicted RBP3.04□□□□□ -1.92
RFC4-211ENST00000460408 INTS9Q9NV88 658 aaKnown RBP3.04□□□□□ -1.92
RFC4-211ENST00000460408 C2orf42Q9NWW7 574 aa3.04□□□□□ -1.92
RFC4-211ENST00000460408 ERAP1Q9NZ08 941 aa3.04□□□□□ -1.92
RFC4-211ENST00000460408 KCNJ14Q9UNX9 436 aa3.04□□□□□ -1.92
RFC4-211ENST00000460408 TCF19Q9Y242 345 aa3.04□□□□□ -1.92
RFC4-211ENST00000460408 ZFP37Q9Y6Q3 630 aaPredicted RBP3.04□□□□□ -1.92
RFC4-211ENST00000460408 WDR97A6NE52 1622 aa3.04□□□□□ -1.92
RFC4-211ENST00000460408 TOPBP1Q92547 1522 aa3.03□□□□□ -1.92
RFC4-211ENST00000460408 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.03□□□□□ -1.92
RFC4-211ENST00000460408 A4D1N5 150 aa3.03□□□□□ -1.92
RFC4-211ENST00000460408 CCL24O00175 119 aa3.03□□□□□ -1.92
RFC4-211ENST00000460408 PCDH7O60245 1069 aa3.03□□□□□ -1.92
RFC4-211ENST00000460408 SELENOFO60613 162 aa3.03□□□□□ -1.92
RFC4-211ENST00000460408 RPS6KA5O75582 802 aa3.03□□□□□ -1.92
RFC4-211ENST00000460408 LUC7L3O95232 432 aaKnown RBP3.03□□□□□ -1.92
RFC4-211ENST00000460408 PGLSO95336 258 aa3.03□□□□□ -1.92
RFC4-211ENST00000460408 MOCS3O95396 460 aa3.03□□□□□ -1.92
RFC4-211ENST00000460408 TGDSO95455 350 aa3.03□□□□□ -1.92
RFC4-211ENST00000460408 CGAP01215 116 aa3.03□□□□□ -1.92
RFC4-211ENST00000460408 APOHP02749 345 aaPredicted RBP3.03□□□□□ -1.92
RFC4-211ENST00000460408 EDN1P05305 212 aa3.03□□□□□ -1.92
RFC4-211ENST00000460408 FAM157CP0CG43 387 aa3.03□□□□□ -1.92
RFC4-211ENST00000460408 CD59P13987 128 aa3.03□□□□□ -1.92
RFC4-211ENST00000460408 CDKN1AP38936 164 aa3.03□□□□□ -1.92
RFC4-211ENST00000460408 TNNT3P45378 269 aaPredicted RBP3.03□□□□□ -1.92
RFC4-211ENST00000460408 HERV-K104P61576 105 aa3.03□□□□□ -1.92
RFC4-211ENST00000460408 PTK6Q13882 451 aa3.03□□□□□ -1.92
RFC4-211ENST00000460408 SQLEQ14534 574 aa3.03□□□□□ -1.92
RFC4-211ENST00000460408 NONOQ15233 471 aaKnown RBP eCLIP3.03□□□□□ -1.92
RFC4-211ENST00000460408 GPR33Q49SQ1 333 aa3.03□□□□□ -1.92
RFC4-211ENST00000460408 LRRC73Q5JTD7 316 aa3.03□□□□□ -1.92
RFC4-211ENST00000460408 OTUD3Q5T2D3 398 aaPredicted RBP3.03□□□□□ -1.92
RFC4-211ENST00000460408 UGT3A1Q6NUS8 523 aa3.03□□□□□ -1.92
RFC4-211ENST00000460408 C11orf88Q6PI97 169 aa3.03□□□□□ -1.92
RFC4-211ENST00000460408 OTOAQ7RTW8 1153 aa3.03□□□□□ -1.92
RFC4-211ENST00000460408 KIRREL3Q8IZU9 778 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms