RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 SENP8Q96LD8 212 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 TM9SF2Q99805 663 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 C2orf49Q9BVC5 232 aaPredicted RBP9.52□□□□□ -0.89
UFD1-205ENST00000459854 ZNF471Q9BX82 626 aaPredicted RBP9.52□□□□□ -0.89
UFD1-205ENST00000459854 C1QTNF7Q9BXJ2 289 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 ZBTB26Q9HCK0 441 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 ZDHHC7Q9NXF8 308 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 HCN3Q9P1Z3 774 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 PCDHGA4Q9Y5G9 962 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 TLR4O00206 839 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 PER2O15055 1255 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 SLC25A12O75746 678 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 IFNA17P01571 189 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 DNASE1P24855 282 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 S100PP25815 95 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 MAPK3P27361 379 aaPredicted RBP9.52□□□□□ -0.89
UFD1-205ENST00000459854 FMO3P31513 532 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 GRK5P34947 590 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 MANFP55145 182 aaKnown RBP9.52□□□□□ -0.89
UFD1-205ENST00000459854 CTBP1Q13363 440 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 SLC25A52Q3SY17 297 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 NIPA2Q8N8Q9 360 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 LRRC15Q8TF66 581 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 ING5Q8WYH8 240 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 TMEM80Q96HE8 168 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 ZFP3Q96NJ6 502 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 TRIM36Q9NQ86 728 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 H0YGN5 161 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 RNF225M0QZC1 329 aaPredicted RBP9.52□□□□□ -0.89
UFD1-205ENST00000459854 COQ9O75208 318 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 LRG1P02750 347 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 CKMT2P17540 419 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 KLRC2P26717 231 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 CLCN4P51793 760 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 SLC10A6Q3KNW5 377 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 PGAP1Q75T13 922 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 FAM35AQ86V20 835 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 DENND1CQ8IV53 801 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 SAMD14Q8IZD0 417 aaPredicted RBP9.52□□□□□ -0.89
UFD1-205ENST00000459854 GDPD1Q8N9F7 314 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 LILRB4Q8NHJ6 448 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 GEMIN6Q8WXD5 167 aaKnown RBP9.52□□□□□ -0.89
UFD1-205ENST00000459854 NXPE2Q96DL1 559 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 HERC2P3Q9BVR0 1158 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 SPATA9Q9BWV2 254 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 BTBD1Q9H0C5 482 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 TBC1D17Q9HA65 648 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 RUVBL1Q9Y265 456 aaKnown RBP9.52□□□□□ -0.89
UFD1-205ENST00000459854 TCAF1Q9Y4C2 921 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 PCDHGA11Q9Y5H2 935 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 NFS1Q9Y697 457 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 SMCHD1A6NHR9 2005 aa9.52□□□□□ -0.89
UFD1-205ENST00000459854 DAPL1A0PJW8 107 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 C9IYK1 514 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 SLC7A4O43246 635 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 STK16O75716 305 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 VNN2O95498 520 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 RAB36O95755 333 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 NUDT7P0C024 238 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 GKN3PP0CG01 181 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 KCNE1P15382 129 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 DCKP27707 260 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 CDH15P55291 814 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 MGAT3Q09327 533 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 SEMA5AQ13591 1074 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 CBFBQ13951 182 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 SEC23BQ15437 767 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 GRK1Q15835 563 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 FSTL4Q6MZW2 842 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 OR10H5Q8NGA6 315 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 OR10A6Q8NH74 314 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 MED30Q96HR3 178 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 LPIN3Q9BQK8 851 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 DMAC2Q9NW81 257 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 CNTN3Q9P232 1028 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 NUFIP1Q9UHK0 495 aaKnown RBP9.51□□□□□ -0.89
UFD1-205ENST00000459854 SCP2D1Q9UJQ7 156 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 ACSL5Q9ULC5 683 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 STUB1Q9UNE7 303 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 BORCS7-ASMTA0A0B4J1R7 106 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 PRAMEF12O95522 483 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 ADH1AP07327 375 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 PTPN9P43378 593 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 ABCG1P45844 678 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 WNT3AP56704 352 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 ARF3P61204 181 aaPredicted RBP9.51□□□□□ -0.89
UFD1-205ENST00000459854 ARF1P84077 181 aaKnown RBP9.51□□□□□ -0.89
UFD1-205ENST00000459854 C9orf57Q5W0N0 161 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 KIAA0930Q6ICG6 404 aaPredicted RBP9.51□□□□□ -0.89
UFD1-205ENST00000459854 COMMD7Q86VX2 200 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 MARCH9Q86YJ5 346 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 PIAS4Q8N2W9 510 aaPredicted RBP9.51□□□□□ -0.89
UFD1-205ENST00000459854 PLD5Q8N7P1 536 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 C1orf216Q8TAB5 229 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 PPP1R16AQ96I34 528 aa9.51□□□□□ -0.89
UFD1-205ENST00000459854 POLR2J3Q9H1A7 115 aaKnown RBP9.51□□□□□ -0.89
UFD1-205ENST00000459854 PAK1IP1Q9NWT1 392 aaPredicted RBP9.51□□□□□ -0.89
UFD1-205ENST00000459854 ZNFX1Q9P2E3 1918 aaKnown RBP9.51□□□□□ -0.89
UFD1-205ENST00000459854 DOCK3Q8IZD9 2030 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms