RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 SNRPD1P62314 119 aaKnown RBP12.07□□□□□ -0.48
LINC00959-201ENST00000456581 SFSWAPQ12872 951 aaKnown RBP12.07□□□□□ -0.48
LINC00959-201ENST00000456581 GTF2H3Q13889 308 aa12.07□□□□□ -0.48
LINC00959-201ENST00000456581 SF1Q15637 639 aaKnown RBP12.07□□□□□ -0.48
LINC00959-201ENST00000456581 SOWAHCQ53LP3 525 aaPredicted RBP12.07□□□□□ -0.48
LINC00959-201ENST00000456581 CARD16Q5EG05 197 aa12.07□□□□□ -0.48
LINC00959-201ENST00000456581 CES5AQ6NT32 575 aa12.07□□□□□ -0.48
LINC00959-201ENST00000456581 SNX20Q7Z614 316 aa12.07□□□□□ -0.48
LINC00959-201ENST00000456581 CYP4Z1Q86W10 505 aa12.07□□□□□ -0.48
LINC00959-201ENST00000456581 ZNF513Q8N8E2 541 aaPredicted RBP12.07□□□□□ -0.48
LINC00959-201ENST00000456581 ZNF555Q8NEP9 628 aa12.07□□□□□ -0.48
LINC00959-201ENST00000456581 PNPT1Q8TCS8 783 aaKnown RBP12.07□□□□□ -0.48
LINC00959-201ENST00000456581 TSPEARQ8WU66 669 aa12.07□□□□□ -0.48
LINC00959-201ENST00000456581 TRUB1Q8WWH5 349 aaKnown RBP12.07□□□□□ -0.48
LINC00959-201ENST00000456581 EGLN2Q96KS0 407 aa12.07□□□□□ -0.48
LINC00959-201ENST00000456581 TSSK3Q96PN8 268 aa12.07□□□□□ -0.48
LINC00959-201ENST00000456581 OR52E6Q96RD3 313 aa12.07□□□□□ -0.48
LINC00959-201ENST00000456581 NODALQ96S42 347 aa12.07□□□□□ -0.48
LINC00959-201ENST00000456581 MUC13Q9H3R2 512 aa12.07□□□□□ -0.48
LINC00959-201ENST00000456581 SPHK2Q9NRA0 654 aa12.07□□□□□ -0.48
LINC00959-201ENST00000456581 RASSF1Q9NS23 344 aa12.07□□□□□ -0.48
LINC00959-201ENST00000456581 B4GALT6Q9UBX8 382 aa12.07□□□□□ -0.48
LINC00959-201ENST00000456581 HS3ST2Q9Y278 367 aa12.07□□□□□ -0.48
LINC00959-201ENST00000456581 F5P12259 2224 aa12.07□□□□□ -0.48
LINC00959-201ENST00000456581 HELZP42694 1942 aaKnown RBP12.06□□□□□ -0.48
LINC00959-201ENST00000456581 LINC01553A4QN01 128 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 MYO1GB0I1T2 1018 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 ZNF682O95780 498 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 FADS2O95864 444 aaKnown RBP12.06□□□□□ -0.48
LINC00959-201ENST00000456581 ZNF12P17014 697 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 PTPN2P17706 415 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 ITGALP20701 1170 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 ACRV1P26436 265 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 B4GALNT1Q00973 533 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 KCNC4Q03721 635 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 ZNF648Q5T619 568 aaPredicted RBP12.06□□□□□ -0.48
LINC00959-201ENST00000456581 Q6ZPB1 254 aaPredicted RBP12.06□□□□□ -0.48
LINC00959-201ENST00000456581 C7orf61Q8IZ16 206 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 RGL4Q8IZJ4 473 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 OR2A12Q8NGT7 310 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 GLMNQ92990 594 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 TUBA1CQ9BQE3 449 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 C1QTNF3Q9BXJ4 246 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 BRD9Q9H8M2 597 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 ZDHHC4Q9NPG8 344 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 DNAJB9Q9UBS3 223 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 TMPRSS11EQ9UL52 423 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 MAFFQ9ULX9 164 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 IRAK3Q9Y616 596 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 BRWD1Q9NSI6 2320 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 ELOVL7A1L3X0 281 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 LOC730098B7Z3J9 87 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 SH3BGRLO75368 114 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 TULP3O75386 442 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 ZNF7P17097 686 aaPredicted RBP12.06□□□□□ -0.48
LINC00959-201ENST00000456581 JUNBP17275 347 aaPredicted RBP12.06□□□□□ -0.48
LINC00959-201ENST00000456581 VIPR2P41587 438 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 MVKQ03426 396 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 TMEM53Q6P2H8 277 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 MCOLN3Q8TDD5 553 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 FAR1Q8WVX9 515 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 HDAC2Q92769 488 aaKnown RBP12.06□□□□□ -0.48
LINC00959-201ENST00000456581 MUL1Q969V5 352 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 PYCR2Q96C36 320 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 SCRN2Q96FV2 425 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 TMEM106CQ9BVX2 250 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 DPY30Q9C005 99 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 RNF167Q9H6Y7 350 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 GPN2Q9H9Y4 310 aaPredicted RBP12.06□□□□□ -0.48
LINC00959-201ENST00000456581 AMBNQ9NP70 447 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 TMEM9Q9P0T7 183 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 ZNF490Q9ULM2 529 aaPredicted RBP12.06□□□□□ -0.48
LINC00959-201ENST00000456581 ALPK3Q96L96 1907 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 AQP9O43315 295 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 SOCS5O75159 536 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 CREG1O75629 220 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 SPAM1P38567 509 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 METAP1P53582 386 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 VTCN1Q7Z7D3 282 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 ADGRD2Q7Z7M1 963 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 LSRQ86X29 649 aaPredicted RBP12.06□□□□□ -0.48
LINC00959-201ENST00000456581 DCP2Q8IU60 420 aaKnown RBP12.06□□□□□ -0.48
LINC00959-201ENST00000456581 SFTPA1Q8IWL2 248 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 GPR65Q8IYL9 337 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 CHPFQ8IZ52 775 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 STK40Q8N2I9 435 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 NXPE1Q8N323 547 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 RSPRY1Q96DX4 576 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 DPH2Q9BQC3 489 aaPredicted RBP12.06□□□□□ -0.48
LINC00959-201ENST00000456581 BTBD2Q9BX70 525 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 GIN1Q9NXP7 522 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 GPRC5BQ9NZH0 403 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 PRKAG2Q9UGJ0 569 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 ENPP5Q9UJA9 477 aa12.06□□□□□ -0.48
LINC00959-201ENST00000456581 HTR3EA5X5Y0 456 aa12.05□□□□□ -0.48
LINC00959-201ENST00000456581 BCKDKO14874 412 aa12.05□□□□□ -0.48
LINC00959-201ENST00000456581 NDUFS2O75306 463 aa12.05□□□□□ -0.48
LINC00959-201ENST00000456581 C1SP09871 688 aa12.05□□□□□ -0.48
LINC00959-201ENST00000456581 PSMB9P28065 219 aa12.05□□□□□ -0.48
LINC00959-201ENST00000456581 CASP9P55211 416 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 525.5 ms