RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 MFSD3Q96ES6 412 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 PTCHD1Q96NR3 888 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 TRAPPC9Q96Q05 1148 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 CD180Q99467 661 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 COPS8Q99627 209 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 TMEM121Q9BTD3 319 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 HGH1Q9BTY7 390 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 NUDT9Q9BW91 350 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 NLNQ9BYT8 704 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 SLC7A5P2Q9GIP4 190 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 ACTR5Q9H9F9 607 aaPredicted RBP4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 ARNT2Q9HBZ2 717 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 PCMTD2Q9NV79 361 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 NLE1Q9NVX2 485 aaPredicted RBP4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 ERVK13-1Q9NX77 482 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 SPHK1Q9NYA1 384 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 IMPACTQ9P2X3 320 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 SLC2A6Q9UGQ3 507 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 FBXL7Q9UJT9 491 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 SERTAD3Q9UJW9 196 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 POMT2Q9UKY4 750 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 RNF112Q9ULX5 631 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 SNX7Q9UNH6 387 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 BTRCQ9Y297 605 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 R3HDM2Q9Y2K5 976 aaKnown RBP4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 KLHL20Q9Y2M5 609 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 TDRKHQ9Y2W6 561 aaKnown RBP4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 PCDHA9Q9Y5H5 950 aa4.53□□□□□ -1.68
GTF3C3-208ENST00000455546 PCNX1Q96RV3 2341 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 IGLV3-16A0A075B6K0 115 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 TRBV5-4A0A0C4DH59 114 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 CCDC162PA2VCL2 907 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 IQCF5A8MTL0 148 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 C2orf74A8MZ97 194 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 ISM1B1AKI9 464 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 TCP11X1B4DZS4 312 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 E7EQ34 232 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 KRT86O43790 486 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 SEMA7AO75326 666 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 VPS4BO75351 444 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 TMEM63AO94886 807 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 IGHA1P01876 353 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 PTMAP06454 111 aaKnown RBP4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 RNF224P0DH78 156 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 UGT2B7P16662 529 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 PAMP19021 973 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 CYP2A7P20853 494 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 ACADLP28330 430 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 NDUFS1P28331 727 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 OTX2P32243 289 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 CETN2P41208 172 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 GRIA3P42263 894 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 MASP1P48740 699 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 CD97P48960 835 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 ZNF75DP51815 510 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 PGDP52209 483 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 GSDMDP57764 484 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 CACNG1Q06432 222 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 MRPL49Q13405 166 aaKnown RBP4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 SNX1Q13596 522 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 ATP1A4Q13733 1029 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 BOP1Q14137 746 aaKnown RBP4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 INPP5JQ15735 1006 aaPredicted RBP4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 PLEKHN1Q494U1 663 aaPredicted RBP4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 GPR33Q49SQ1 333 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 IZUMO3Q5VZ72 239 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 JMJD6Q6NYC1 403 aaPredicted RBP4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 CYB5D1Q6P9G0 228 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 SARM1Q6SZW1 724 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 FAM198BQ6UWH4 519 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 PEX26Q7Z412 305 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 KIAA1328Q86T90 577 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 MTDHQ86UE4 582 aaKnown RBP4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 TAX1BP1Q86VP1 789 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 GAS2L3Q86XJ1 694 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 TMTC1Q8IUR5 882 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 VRK3Q8IV63 474 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 SYTL1Q8IYJ3 562 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 KRT222Q8N1A0 295 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 CISD2Q8N5K1 135 aaKnown RBP4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 RBMXL3Q8N7X1 1067 aaKnown RBP4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 LRRC57Q8N9N7 239 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 OR8K5Q8NH50 307 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 CFAP61Q8NHU2 1237 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 FLVCR1-AS1Q8TAF5 88 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 STYXQ8WUJ0 223 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 ATG4AQ8WYN0 398 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 ELMO1Q92556 727 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 N4BP2L2Q92802 583 aaPredicted RBP4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 DIO2Q92813 273 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 HDAC10Q969S8 669 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 CCDC140Q96MF4 163 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 ZNF778Q96MU6 729 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 IL17FQ96PD4 163 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 OR2A14Q96R47 310 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 PANX2Q96RD6 677 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 FERMT1Q9BQL6 677 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 DESI2Q9BSY9 194 aa4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 TFB2MQ9H5Q4 396 aaKnown RBP4.52□□□□□ -1.69
GTF3C3-208ENST00000455546 MVB12BQ9H7P6 319 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms