RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 NANOGP8Q6NSW7 305 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 CGB2Q6NT52 195 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 FAM180BQ6P0A1 224 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 WASH2PQ6VEQ5 465 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 QSOX2Q6ZRP7 698 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 OVCH2Q7RTZ1 564 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 LYSMD3Q7Z3D4 306 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 HSD17B13Q7Z5P4 300 aaPredicted RBP2.15□□□□□ -2.06
USP53-202ENST00000450251 DSG4Q86SJ6 1040 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 TSPYL5Q86VY4 417 aaPredicted RBP2.15□□□□□ -2.06
USP53-202ENST00000450251 PSTKQ8IV42 348 aaKnown RBP2.15□□□□□ -2.06
USP53-202ENST00000450251 LIX1LQ8IVB5 337 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 ADGRF4Q8IZF3 695 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 CPXCR1Q8N123 301 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 FTMTQ8N4E7 242 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 COLGALT1Q8NBJ5 622 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 ZBTB44Q8NCP5 570 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 C11orf65Q8NCR3 313 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 FRS2Q8WU20 508 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 SLC20A1Q8WUM9 679 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 TNFRSF25Q93038 417 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 KCTD12Q96CX2 325 aaKnown RBP2.15□□□□□ -2.06
USP53-202ENST00000450251 LRRC46Q96FV0 321 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 FBXL20Q96IG2 436 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 FOPNLQ96NB1 174 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 CYP2S1Q96SQ9 504 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 UHRF1Q96T88 793 aaPredicted RBP2.15□□□□□ -2.06
USP53-202ENST00000450251 PCDHB18PQ96TA0 734 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 SMAD5Q99717 465 aaKnown RBP2.15□□□□□ -2.06
USP53-202ENST00000450251 USB1Q9BQ65 265 aaKnown RBP2.15□□□□□ -2.06
USP53-202ENST00000450251 SLX1AQ9BQ83 275 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 TBL1YQ9BQ87 522 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 SLC6A16Q9GZN6 736 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 OR10A4Q9H209 315 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 LMAN1LQ9HAT1 526 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 POLE4Q9NR33 117 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 NANSQ9NR45 359 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 ENAMQ9NRM1 1142 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 SPHK1Q9NYA1 384 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 PACSIN3Q9UKS6 424 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 AGO2Q9UKV8 859 aaKnown RBP2.15□□□□□ -2.06
USP53-202ENST00000450251 KLK4Q9Y5K2 254 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 TOGARAM1Q9Y4F4 1720 aa2.15□□□□□ -2.06
USP53-202ENST00000450251 TRAV20A0A0B4J274 112 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 FAM205CA6NFA0 338 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 CBY3A6NI87 242 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 METTL15A6NJ78 407 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 GPR89AB7ZAQ6 455 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 E7ESA3 106 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 F5H5P2 479 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 AIPO00170 330 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 TNFRSF11BO00300 401 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 SOCS2O14508 198 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 PPM1DO15297 605 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 EEDO75530 441 aaKnown RBP2.15□□□□□ -2.07
USP53-202ENST00000450251 ARL6IP5O75915 188 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 ABL1P00519 1130 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 F9P00740 461 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 INHAP05111 366 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 ALPPP05187 535 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 GPR89BP0CG08 455 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 FDX1P10109 184 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 BCKDHAP12694 445 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 GTF2F2P13984 249 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 HPGDP15428 266 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 MPSTP25325 297 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 EPHA3P29320 983 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 IDUAP35475 653 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 ETV4P43268 484 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 GLRBP48167 497 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 IDH2P48735 452 aaKnown RBP2.15□□□□□ -2.07
USP53-202ENST00000450251 ARF5P84085 180 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 TMEM62Q0P6H9 643 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 AIMP2Q13155 320 aaKnown RBP2.15□□□□□ -2.07
USP53-202ENST00000450251 SLC9A5Q14940 896 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 POU4F3Q15319 338 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 GRIK5Q16478 980 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 PCK2Q16822 640 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 CDO1Q16878 200 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 FAM171A1Q5VUB5 890 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 SLC6A19Q695T7 634 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 OVOS1Q6IE37 1185 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 LPCAT3Q6P1A2 487 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 ZNF529Q6P280 563 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 FAM171BQ6P995 826 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 MFSD7Q6UXD7 560 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 GSG1LQ6UXU4 331 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 GPRIN3Q6ZVF9 776 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 SSX7Q7RTT5 188 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 SLC9B2Q86UD5 537 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 ADIPOR2Q86V24 386 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 IRF2BP1Q8IU81 584 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 C15orf54Q8N8G6 183 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 IL17REQ8NFR9 667 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 CMASQ8NFW8 434 aaPredicted RBP2.15□□□□□ -2.07
USP53-202ENST00000450251 PUM2Q8TB72 1066 aaKnown RBP eCLIP2.15□□□□□ -2.075e-6■■■■■ 56.5
USP53-202ENST00000450251 SPPL2AQ8TCT8 520 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 HCAR2Q8TDS4 363 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 ADAMTS19Q8TE59 1207 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 FAM216AQ8WUB2 273 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms