RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 MMP11P24347 488 aa14.59□□□□□ -0.07
CHD3-205ENST00000449744 SKIV2L2P42285 1042 aaKnown RBP14.59□□□□□ -0.07
CHD3-205ENST00000449744 CARSP49589 748 aaKnown RBP14.59□□□□□ -0.07
CHD3-205ENST00000449744 ARF3P61204 181 aaPredicted RBP14.59□□□□□ -0.07
CHD3-205ENST00000449744 ABATP80404 500 aa14.59□□□□□ -0.07
CHD3-205ENST00000449744 TAP2Q03519 686 aa14.59□□□□□ -0.07
CHD3-205ENST00000449744 OCA2Q04671 838 aa14.59□□□□□ -0.07
CHD3-205ENST00000449744 MORF4L2Q15014 288 aa14.59□□□□□ -0.07
CHD3-205ENST00000449744 VWA5B1Q5TIE3 1220 aa14.59□□□□□ -0.07
CHD3-205ENST00000449744 PRMT9Q6P2P2 845 aa14.59□□□□□ -0.07
CHD3-205ENST00000449744 SHISA6Q6ZSJ9 500 aa14.59□□□□□ -0.07
CHD3-205ENST00000449744 COX15Q7KZN9 410 aa14.59□□□□□ -0.07
CHD3-205ENST00000449744 PIWIL4Q7Z3Z4 852 aaKnown RBP14.59□□□□□ -0.07
CHD3-205ENST00000449744 PAQR7Q86WK9 346 aa14.59□□□□□ -0.07
CHD3-205ENST00000449744 GALNT16Q8N428 558 aa14.59□□□□□ -0.07
CHD3-205ENST00000449744 RERGQ96A58 199 aaPredicted RBP14.59□□□□□ -0.07
CHD3-205ENST00000449744 CERS2Q96G23 380 aa14.59□□□□□ -0.07
CHD3-205ENST00000449744 SPSB2Q99619 263 aa14.59□□□□□ -0.07
CHD3-205ENST00000449744 SMAD5Q99717 465 aaKnown RBP14.59□□□□□ -0.07
CHD3-205ENST00000449744 MFRPQ9BY79 579 aa14.59□□□□□ -0.07
CHD3-205ENST00000449744 SLC26A1Q9H2B4 701 aa14.59□□□□□ -0.07
CHD3-205ENST00000449744 SOX17Q9H6I2 414 aaPredicted RBP14.59□□□□□ -0.07
CHD3-205ENST00000449744 SLAMF7Q9NQ25 335 aa14.59□□□□□ -0.07
CHD3-205ENST00000449744 C5AR2Q9P296 337 aa14.59□□□□□ -0.07
CHD3-205ENST00000449744 CCDC88CQ9P219 2028 aa14.58□□□□□ -0.08
CHD3-205ENST00000449744 PABPN1LA6NDY0 278 aaKnown RBP14.58□□□□□ -0.08
CHD3-205ENST00000449744 CCDC188H7C350 402 aa14.58□□□□□ -0.08
CHD3-205ENST00000449744 VPS4BO75351 444 aa14.58□□□□□ -0.08
CHD3-205ENST00000449744 MYBPC3Q14896 1274 aa14.58□□□□□ -0.08
CHD3-205ENST00000449744 RBBP7Q16576 425 aa14.58□□□□□ -0.08
CHD3-205ENST00000449744 MSS51Q4VC12 460 aa14.58□□□□□ -0.08
CHD3-205ENST00000449744 HP1BP3Q5SSJ5 553 aaPredicted RBP14.58□□□□□ -0.08
CHD3-205ENST00000449744 IRAK1BP1Q5VVH5 260 aa14.58□□□□□ -0.08
CHD3-205ENST00000449744 KIAA0408Q6ZU52 694 aa14.58□□□□□ -0.08
CHD3-205ENST00000449744 CREG2Q8IUH2 290 aa14.58□□□□□ -0.08
CHD3-205ENST00000449744 SPNS2Q8IVW8 549 aa14.58□□□□□ -0.08
CHD3-205ENST00000449744 MYO1HQ8N1T3 1032 aa14.58□□□□□ -0.08
CHD3-205ENST00000449744 CSNK1A1LQ8N752 337 aa14.58□□□□□ -0.08
CHD3-205ENST00000449744 CPT1CQ8TCG5 803 aa14.58□□□□□ -0.08
CHD3-205ENST00000449744 MCOLN3Q8TDD5 553 aa14.58□□□□□ -0.08
CHD3-205ENST00000449744 CFAP36Q96G28 342 aa14.58□□□□□ -0.08
CHD3-205ENST00000449744 CCDC177Q9NQR7 707 aaPredicted RBP14.58□□□□□ -0.08
CHD3-205ENST00000449744 SEMA3GQ9NS98 782 aa14.58□□□□□ -0.08
CHD3-205ENST00000449744 CTSFQ9UBX1 484 aa14.58□□□□□ -0.08
CHD3-205ENST00000449744 ZNF282Q9UDV7 671 aaPredicted RBP14.58□□□□□ -0.08
CHD3-205ENST00000449744 VPS4AQ9UN37 437 aa14.58□□□□□ -0.08
CHD3-205ENST00000449744 CDC14AQ9UNH5 594 aa14.58□□□□□ -0.08
CHD3-205ENST00000449744 BOD1L1Q8NFC6 3051 aa14.57□□□□□ -0.08
CHD3-205ENST00000449744 IGKV1-8A0A0C4DH67 115 aa14.57□□□□□ -0.08
CHD3-205ENST00000449744 TXNDC9O14530 226 aa14.57□□□□□ -0.08
CHD3-205ENST00000449744 PRPF4O43172 522 aaKnown RBP eCLIP14.57□□□□□ -0.08
CHD3-205ENST00000449744 IPO13O94829 963 aaKnown RBP14.57□□□□□ -0.08
CHD3-205ENST00000449744 C8GP07360 202 aa14.57□□□□□ -0.08
CHD3-205ENST00000449744 EZRP15311 586 aaKnown RBP14.57□□□□□ -0.08
CHD3-205ENST00000449744 FBLP22087 321 aaKnown RBP14.57□□□□□ -0.08
CHD3-205ENST00000449744 ITGA3P26006 1051 aa14.57□□□□□ -0.08
CHD3-205ENST00000449744 IVDP26440 423 aa14.57□□□□□ -0.08
CHD3-205ENST00000449744 IMPA1P29218 277 aa14.57□□□□□ -0.08
CHD3-205ENST00000449744 ELK3P41970 407 aa14.57□□□□□ -0.08
CHD3-205ENST00000449744 CD97P48960 835 aa14.57□□□□□ -0.08
CHD3-205ENST00000449744 EMP3P54852 163 aa14.57□□□□□ -0.08
CHD3-205ENST00000449744 AIMP2Q13155 320 aaKnown RBP14.57□□□□□ -0.08
CHD3-205ENST00000449744 PRTGQ2VWP7 1150 aa14.57□□□□□ -0.08
CHD3-205ENST00000449744 ZNF425Q6IV72 752 aa14.57□□□□□ -0.08
CHD3-205ENST00000449744 JMJD6Q6NYC1 403 aaPredicted RBP14.57□□□□□ -0.08
CHD3-205ENST00000449744 TMEM151BQ8IW70 566 aa14.57□□□□□ -0.08
CHD3-205ENST00000449744 CNTN4Q8IWV2 1026 aa14.57□□□□□ -0.08
CHD3-205ENST00000449744 DTWD1Q8N5C7 304 aa14.57□□□□□ -0.08
CHD3-205ENST00000449744 EEF1AKMT1Q8WVE0 214 aa14.57□□□□□ -0.08
CHD3-205ENST00000449744 TM9SF4Q92544 642 aa14.57□□□□□ -0.08
CHD3-205ENST00000449744 MIEF2Q96C03 454 aa14.57□□□□□ -0.08
CHD3-205ENST00000449744 CCDC138Q96M89 665 aa14.57□□□□□ -0.08
CHD3-205ENST00000449744 CRB3Q9BUF7 120 aa14.57□□□□□ -0.08
CHD3-205ENST00000449744 YIPF2Q9BWQ6 316 aa14.57□□□□□ -0.08
CHD3-205ENST00000449744 LUZP4Q9P127 313 aa14.57□□□□□ -0.08
CHD3-205ENST00000449744 STOX2Q9P2F5 926 aaPredicted RBP14.57□□□□□ -0.08
CHD3-205ENST00000449744 FBXL4Q9UKA2 621 aa14.57□□□□□ -0.08
CHD3-205ENST00000449744 CHMP2BQ9UQN3 213 aa14.57□□□□□ -0.08
CHD3-205ENST00000449744 PCM1Q15154 2024 aa14.57□□□□□ -0.08
CHD3-205ENST00000449744 PCSK5Q92824 1860 aa14.57□□□□□ -0.08
CHD3-205ENST00000449744 VSTM2BA6NLU5 285 aa14.56□□□□□ -0.08
CHD3-205ENST00000449744 MASP2O00187 686 aa14.56□□□□□ -0.08
CHD3-205ENST00000449744 SLC16A5O15375 505 aa14.56□□□□□ -0.08
CHD3-205ENST00000449744 TTI1O43156 1089 aa14.56□□□□□ -0.08
CHD3-205ENST00000449744 SORBS2O94875 1100 aaKnown RBP14.56□□□□□ -0.08
CHD3-205ENST00000449744 MED26O95402 600 aa14.56□□□□□ -0.08
CHD3-205ENST00000449744 AHSGP02765 367 aa14.56□□□□□ -0.08
CHD3-205ENST00000449744 HIST1H2AGP0C0S8 130 aaPredicted RBP14.56□□□□□ -0.08
CHD3-205ENST00000449744 HIST1H2ADP20671 130 aa14.56□□□□□ -0.08
CHD3-205ENST00000449744 HRH2P25021 359 aa14.56□□□□□ -0.08
CHD3-205ENST00000449744 ITGA8P53708 1063 aa14.56□□□□□ -0.08
CHD3-205ENST00000449744 ARL4CP56559 192 aa14.56□□□□□ -0.08
CHD3-205ENST00000449744 SP140Q13342 867 aa14.56□□□□□ -0.08
CHD3-205ENST00000449744 PDAP1Q13442 181 aaKnown RBP14.56□□□□□ -0.08
CHD3-205ENST00000449744 HIF1AQ16665 826 aa14.56□□□□□ -0.08
CHD3-205ENST00000449744 TUBB8Q3ZCM7 444 aa14.56□□□□□ -0.08
CHD3-205ENST00000449744 RBM20Q5T481 1227 aaKnown RBP14.56□□□□□ -0.08
CHD3-205ENST00000449744 GARNL3Q5VVW2 1013 aa14.56□□□□□ -0.08
CHD3-205ENST00000449744 PRAMEF13Q5VWM6 474 aa14.56□□□□□ -0.08
CHD3-205ENST00000449744 SLC6A19Q695T7 634 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms