RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 PCDH7O60245 1069 aa4.07□□□□□ -1.76
HMGB3P6-201ENST00000444896 PLGP00747 810 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P6-201ENST00000444896 ERCC2P18074 760 aa4.07□□□□□ -1.76
HMGB3P6-201ENST00000444896 PTAFRP25105 342 aa4.07□□□□□ -1.76
HMGB3P6-201ENST00000444896 ITGA3P26006 1051 aa4.07□□□□□ -1.76
HMGB3P6-201ENST00000444896 MNDAP41218 407 aa4.07□□□□□ -1.76
HMGB3P6-201ENST00000444896 GPR17Q13304 367 aa4.07□□□□□ -1.76
HMGB3P6-201ENST00000444896 ZNF273Q14593 569 aa4.07□□□□□ -1.76
HMGB3P6-201ENST00000444896 MCMDC2Q4G0Z9 681 aa4.07□□□□□ -1.76
HMGB3P6-201ENST00000444896 ZNF449Q6P9G9 518 aa4.07□□□□□ -1.76
HMGB3P6-201ENST00000444896 SUSD1Q6UWL2 747 aa4.07□□□□□ -1.76
HMGB3P6-201ENST00000444896 SLC16A9Q7RTY1 509 aa4.07□□□□□ -1.76
HMGB3P6-201ENST00000444896 RTN4RL2Q86UN3 420 aa4.07□□□□□ -1.76
HMGB3P6-201ENST00000444896 PIGZQ86VD9 579 aa4.07□□□□□ -1.76
HMGB3P6-201ENST00000444896 EID3Q8N140 333 aa4.07□□□□□ -1.76
HMGB3P6-201ENST00000444896 GRAPLQ8TC17 118 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P6-201ENST00000444896 HPSE2Q8WWQ2 592 aa4.07□□□□□ -1.76
HMGB3P6-201ENST00000444896 TMEM190Q8WZ59 177 aa4.07□□□□□ -1.76
HMGB3P6-201ENST00000444896 PIGBQ92521 554 aa4.07□□□□□ -1.76
HMGB3P6-201ENST00000444896 NR4A3Q92570 626 aa4.07□□□□□ -1.76
HMGB3P6-201ENST00000444896 SPSB1Q96BD6 273 aa4.07□□□□□ -1.76
HMGB3P6-201ENST00000444896 FZD8Q9H461 694 aa4.07□□□□□ -1.76
HMGB3P6-201ENST00000444896 ZNF696Q9H7X3 374 aa4.07□□□□□ -1.76
HMGB3P6-201ENST00000444896 Q9H8V8 135 aa4.07□□□□□ -1.76
HMGB3P6-201ENST00000444896 DNAJC4Q9NNZ3 241 aa4.07□□□□□ -1.76
HMGB3P6-201ENST00000444896 FGF21Q9NSA1 209 aa4.07□□□□□ -1.76
HMGB3P6-201ENST00000444896 INTS9Q9NV88 658 aaKnown RBP4.07□□□□□ -1.76
HMGB3P6-201ENST00000444896 SPHK1Q9NYA1 384 aa4.07□□□□□ -1.76
HMGB3P6-201ENST00000444896 CPSF3Q9UKF6 684 aaKnown RBP4.07□□□□□ -1.76
HMGB3P6-201ENST00000444896 GAB2Q9UQC2 676 aa4.07□□□□□ -1.76
HMGB3P6-201ENST00000444896 C2CD2Q9Y426 696 aa4.07□□□□□ -1.76
HMGB3P6-201ENST00000444896 MYO5BQ9ULV0 1848 aa4.07□□□□□ -1.76
HMGB3P6-201ENST00000444896 ANKRD26Q9UPS8 1709 aa4.07□□□□□ -1.76
HMGB3P6-201ENST00000444896 SHPRHQ149N8 1683 aa4.06□□□□□ -1.76
HMGB3P6-201ENST00000444896 DLC1Q96QB1 1528 aa4.06□□□□□ -1.76
HMGB3P6-201ENST00000444896 MED14O60244 1454 aa4.06□□□□□ -1.76
HMGB3P6-201ENST00000444896 IQSEC2Q5JU85 1478 aa4.06□□□□□ -1.76
HMGB3P6-201ENST00000444896 YTHDC2Q9H6S0 1430 aaKnown RBP4.06□□□□□ -1.76
HMGB3P6-201ENST00000444896 ABCC11Q96J66 1382 aa4.06□□□□□ -1.76
HMGB3P6-201ENST00000444896 ENO4A6NNW6 628 aa4.06□□□□□ -1.76
HMGB3P6-201ENST00000444896 AP5Z1O43299 807 aa4.06□□□□□ -1.76
HMGB3P6-201ENST00000444896 IGHV4-31P0DP07 118 aa4.06□□□□□ -1.76
HMGB3P6-201ENST00000444896 SAGP10523 405 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P6-201ENST00000444896 CA6P23280 308 aa4.06□□□□□ -1.76
HMGB3P6-201ENST00000444896 NKX2-1P43699 371 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P6-201ENST00000444896 CLDN15P56746 228 aa4.06□□□□□ -1.76
HMGB3P6-201ENST00000444896 UBASH3AP57075 661 aa4.06□□□□□ -1.76
HMGB3P6-201ENST00000444896 GNB1P62873 340 aa4.06□□□□□ -1.76
HMGB3P6-201ENST00000444896 CUL3Q13618 768 aa4.06□□□□□ -1.76
HMGB3P6-201ENST00000444896 IDI1Q13907 227 aa4.06□□□□□ -1.76
HMGB3P6-201ENST00000444896 RBM39Q14498 530 aaKnown RBP4.06□□□□□ -1.76
HMGB3P6-201ENST00000444896 ODF4Q2M2E3 257 aa4.06□□□□□ -1.76
HMGB3P6-201ENST00000444896 C15orf39Q6ZRI6 1047 aa4.06□□□□□ -1.76
HMGB3P6-201ENST00000444896 CENPQQ7L2Z9 268 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P6-201ENST00000444896 SLFN11Q7Z7L1 901 aa4.06□□□□□ -1.76
HMGB3P6-201ENST00000444896 TLK2Q86UE8 772 aa4.06□□□□□ -1.76
HMGB3P6-201ENST00000444896 MFN1Q8IWA4 741 aa4.06□□□□□ -1.76
HMGB3P6-201ENST00000444896 ZNF611Q8N823 705 aa4.06□□□□□ -1.76
HMGB3P6-201ENST00000444896 KBTBD8Q8NFY9 601 aa4.06□□□□□ -1.76
HMGB3P6-201ENST00000444896 OR52N5Q8NH56 324 aa4.06□□□□□ -1.76
HMGB3P6-201ENST00000444896 KIF18AQ8NI77 898 aa4.06□□□□□ -1.76
HMGB3P6-201ENST00000444896 FAM76AQ8TAV0 307 aa4.06□□□□□ -1.76
HMGB3P6-201ENST00000444896 EXT2Q93063 718 aa4.06□□□□□ -1.76
HMGB3P6-201ENST00000444896 FBXO17Q96EF6 278 aa4.06□□□□□ -1.76
HMGB3P6-201ENST00000444896 NSL1Q96IY1 281 aa4.06□□□□□ -1.76
HMGB3P6-201ENST00000444896 ZMAT2Q96NC0 199 aaKnown RBP4.06□□□□□ -1.76
HMGB3P6-201ENST00000444896 SLC2A11Q9BYW1 496 aa4.06□□□□□ -1.76
HMGB3P6-201ENST00000444896 SHARPINQ9H0F6 387 aa4.06□□□□□ -1.76
HMGB3P6-201ENST00000444896 CDH20Q9HBT6 801 aa4.06□□□□□ -1.76
HMGB3P6-201ENST00000444896 ZNF71Q9NQZ8 489 aaPredicted RBP4.06□□□□□ -1.76
HMGB3P6-201ENST00000444896 FLRT3Q9NZU0 649 aa4.06□□□□□ -1.76
HMGB3P6-201ENST00000444896 TBC1D7Q9P0N9 293 aa4.06□□□□□ -1.76
HMGB3P6-201ENST00000444896 MDFICQ9P1T7 246 aa4.06□□□□□ -1.76
HMGB3P6-201ENST00000444896 TSPOAP1O95153 1857 aa4.06□□□□□ -1.76
HMGB3P6-201ENST00000444896 ARID2Q68CP9 1835 aa4.06□□□□□ -1.76
HMGB3P6-201ENST00000444896 ALKQ9UM73 1620 aa4.06□□□□□ -1.76
HMGB3P6-201ENST00000444896 PTPRMP28827 1452 aa4.05□□□□□ -1.76
HMGB3P6-201ENST00000444896 A0A1W2PP64 1363 aa4.05□□□□□ -1.76
HMGB3P6-201ENST00000444896 KIF20BQ96Q89 1820 aa4.05□□□□□ -1.76
HMGB3P6-201ENST00000444896 A0A0G2JLW4 131 aa4.05□□□□□ -1.76
HMGB3P6-201ENST00000444896 CASTOR2A6NHX0 329 aa4.05□□□□□ -1.76
HMGB3P6-201ENST00000444896 ZNF197O14709 1029 aa4.05□□□□□ -1.76
HMGB3P6-201ENST00000444896 CLIC2O15247 247 aa4.05□□□□□ -1.76
HMGB3P6-201ENST00000444896 ATP6AP2O75787 350 aa4.05□□□□□ -1.76
HMGB3P6-201ENST00000444896 DDHD2O94830 711 aa4.05□□□□□ -1.76
HMGB3P6-201ENST00000444896 PAK4O96013 591 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P6-201ENST00000444896 PENKP01210 267 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P6-201ENST00000444896 QDPRP09417 244 aa4.05□□□□□ -1.76
HMGB3P6-201ENST00000444896 TCF4P15884 667 aa4.05□□□□□ -1.76
HMGB3P6-201ENST00000444896 GNB3P16520 340 aa4.05□□□□□ -1.76
HMGB3P6-201ENST00000444896 TCEA1P23193 301 aaKnown RBP4.05□□□□□ -1.76
HMGB3P6-201ENST00000444896 CHRNB4P30926 498 aa4.05□□□□□ -1.76
HMGB3P6-201ENST00000444896 HSPA4P34932 840 aa4.05□□□□□ -1.76
HMGB3P6-201ENST00000444896 MAP2K2P36507 400 aa4.05□□□□□ -1.76
HMGB3P6-201ENST00000444896 MAZP56270 477 aaKnown RBP4.05□□□□□ -1.76
HMGB3P6-201ENST00000444896 GCNT1Q02742 428 aa4.05□□□□□ -1.76
HMGB3P6-201ENST00000444896 HERC3Q15034 1050 aa4.05□□□□□ -1.76
HMGB3P6-201ENST00000444896 TCTE1Q5JU00 501 aa4.05□□□□□ -1.76
HMGB3P6-201ENST00000444896 IL27RAQ6UWB1 636 aa4.05□□□□□ -1.76
HMGB3P6-201ENST00000444896 SH2D5Q6ZV89 423 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms