RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 FAM219BQ5XKK7 198 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 GPR65Q8IYL9 337 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.89□□□□□ -1.637e-9■■■■□ 21.9
HERC1-201ENST00000443617 ERMAPQ96PL5 475 aaPredicted RBP4.89□□□□□ -1.63
HERC1-201ENST00000443617 PIP5K1AQ99755 562 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 SRRQ9GZT4 340 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 RIMKLBQ9ULI2 386 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 ALG5Q9Y673 324 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 A0A0G2JMP0 313 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 C5orf58C9J3I9 102 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 HBP1O60381 514 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 HLA-DQB2P05538 268 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 TGFB3P10600 412 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 ENGP17813 658 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 EPHA2P29317 976 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 AIF1P55008 147 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 SPIBQ01892 262 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 LARS2Q15031 903 aaKnown RBP4.89□□□□□ -1.63
HERC1-201ENST00000443617 CASP12Q6UXS9 341 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 PM20D2Q8IYS1 436 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 NPWQ8N729 165 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 KHSRPQ92945 711 aaKnown RBP eCLIP4.89□□□□□ -1.638e-7■■■□□ 16.1
HERC1-201ENST00000443617 EPYCQ99645 322 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 PCDHB16Q9NRJ7 776 aa4.89□□□□□ -1.63
HERC1-201ENST00000443617 ARFGEF2Q9Y6D5 1785 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 RFXANKO14593 260 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 MUSKO15146 869 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 CD6P30203 668 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 SNTA1Q13424 505 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 TOR2AQ5JU69 321 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 CDKL4Q5MAI5 379 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 SLC35F1Q5T1Q4 408 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 DCAF15Q66K64 600 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 GPR139Q6DWJ6 353 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 OR4L1Q8NH43 312 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 MARVELD3Q96A59 401 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 FDXACB1Q9BRP7 624 aaPredicted RBP4.88□□□□□ -1.63
HERC1-201ENST00000443617 COLEC11Q9BWP8 271 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 RBCK1Q9BYM8 510 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 C11orf16Q9NQ32 467 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 NDFIP2Q9NV92 336 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 TMLHEQ9NVH6 421 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 NLKQ9UBE8 527 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 COMMD3Q9UBI1 195 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 STUB1Q9UNE7 303 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 CACNA1SQ13698 1873 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 CICQ96RK0 1608 aaPredicted RBP4.88□□□□□ -1.63
HERC1-201ENST00000443617 ACADMP11310 421 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 EFNA1P20827 205 aaPredicted RBP4.88□□□□□ -1.63
HERC1-201ENST00000443617 ALDH6A1Q02252 535 aaKnown RBP4.88□□□□□ -1.63
HERC1-201ENST00000443617 CACNB2Q08289 660 aaPredicted RBP4.88□□□□□ -1.63
HERC1-201ENST00000443617 SCAPQ12770 1279 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 ZMYND11Q15326 602 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 TBCEQ15813 527 aaPredicted RBP4.88□□□□□ -1.63
HERC1-201ENST00000443617 GCNT6Q5T4J0 391 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 C9orf57Q5W0N0 161 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 VPS37AQ8NEZ2 397 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 CDC26Q8NHZ8 85 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 PROKR1Q8TCW9 393 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 RAD9AQ99638 391 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 ULBP1Q9BZM6 244 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 TKTL2Q9H0I9 626 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 COL5A2P05997 1499 aaPredicted RBP4.88□□□□□ -1.63
HERC1-201ENST00000443617 FPGTO14772 594 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 INPPL1O15357 1258 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 CDRT1O95170 752 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 CPSF4O95639 269 aaKnown RBP4.88□□□□□ -1.63
HERC1-201ENST00000443617 ZNF81P51508 661 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 ZNF235Q14590 738 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 MARC1Q5VT66 337 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 PHYKPLQ8IUZ5 450 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 C11orf65Q8NCR3 313 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 TRAPPC12Q8WVT3 735 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 MUTYHQ9UIF7 546 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 NDRG2Q9UN36 371 aaKnown RBP4.88□□□□□ -1.63
HERC1-201ENST00000443617 MATN3O15232 486 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 PTHP01270 115 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 DSTNP60981 165 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 COX10Q12887 443 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 SEMA3BQ13214 749 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 SLC10A6Q3KNW5 377 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 HFE2Q6ZVN8 426 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 SPNS2Q8IVW8 549 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 DNAJB8Q8NHS0 232 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 MARCH4Q9P2E8 410 aaPredicted RBP4.88□□□□□ -1.63
HERC1-201ENST00000443617 FAM50BQ9Y247 325 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 F5P12259 2224 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 PARP4Q9UKK3 1724 aaKnown RBP4.88□□□□□ -1.63
HERC1-201ENST00000443617 C2orf81A6NN90 581 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 BAG6P46379 1132 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 COL28A1Q2UY09 1125 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 ZNF789Q5FWF6 425 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 LAIR2Q6ISS4 152 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 DPP9Q86TI2 863 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 OR7G3Q8NG95 312 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 FCRL2Q96LA5 508 aaPredicted RBP4.88□□□□□ -1.63
HERC1-201ENST00000443617 TCF25Q9BQ70 676 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 SLC35C2Q9NQQ7 365 aa4.88□□□□□ -1.63
HERC1-201ENST00000443617 RPL36Q9Y3U8 105 aaKnown RBP4.88□□□□□ -1.63
HERC1-201ENST00000443617 TOR1AO14656 332 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms