RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 PLPP6Q8IY26 295 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 PAF1Q8N7H5 531 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 OR2T29Q8NH02 315 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 DNASE1L2Q92874 299 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 ZFYVE19Q96K21 471 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 COPS4Q9BT78 406 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 RASSF1Q9NS23 344 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 C1orf109Q9NX04 203 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 PRELID1Q9Y255 219 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 ALPK3Q96L96 1907 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 LOC285095A0A1B0GVY8 99 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 A0A1W2PQH9 124 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 NPEPPSL1A6NEC2 478 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 NCF1BA6NI72 391 aaPredicted RBP11.57□□□□□ -0.56
LTBR-203ENST00000441074 A8MV72 311 aaPredicted RBP11.57□□□□□ -0.56
LTBR-203ENST00000441074 NCF1CA8MVU1 366 aaPredicted RBP11.57□□□□□ -0.56
LTBR-203ENST00000441074 E2F3O00716 465 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 ARHGAP33O14559 1287 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 PCDHGA12O60330 932 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 VNN2O95498 520 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 FGF1P05230 155 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 NCF1P14598 390 aaPredicted RBP11.57□□□□□ -0.56
LTBR-203ENST00000441074 SYN1P17600 705 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 HLA-DPA1P20036 260 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 M6PRP20645 277 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 FPR1P21462 350 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 DNAJA1P31689 397 aaKnown RBP11.57□□□□□ -0.56
LTBR-203ENST00000441074 TIE1P35590 1138 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 SOX6P35712 828 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 RPS5P46782 204 aaKnown RBP11.57□□□□□ -0.56
LTBR-203ENST00000441074 DEFB103AP81534 67 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 CREMQ03060 361 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 FBXO43Q4G163 708 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 MSANTD2Q6P1R3 559 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 IL27RAQ6UWB1 636 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 GCNT7Q6ZNI0 430 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 ELMOD2Q8IZ81 293 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 FLCNQ8NFG4 579 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 APH1BQ8WW43 257 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 MYDGFQ969H8 173 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 UBE2FQ969M7 185 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 SEPT5Q99719 369 aaPredicted RBP11.57□□□□□ -0.56
LTBR-203ENST00000441074 DHRS9Q9BPW9 319 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 CATSPERZQ9NTU4 200 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 PLCXD1Q9NUJ7 323 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 ACOXLQ9NUZ1 547 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 TMEM248Q9NWD8 314 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 C14orf119Q9NWQ9 140 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 TAS2R13Q9NYV9 303 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 STMN3Q9NZ72 180 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 MPP6Q9NZW5 540 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 PRKAG2Q9UGJ0 569 aa11.57□□□□□ -0.56
LTBR-203ENST00000441074 SCN5AQ14524 2016 aa11.56□□□□□ -0.56
LTBR-203ENST00000441074 LOC100506127A0A0U1RQW1 187 aa11.56□□□□□ -0.56
LTBR-203ENST00000441074 KRT87PA6NCN2 255 aa11.56□□□□□ -0.56
LTBR-203ENST00000441074 ZSCAN5BA6NJL1 495 aa11.56□□□□□ -0.56
LTBR-203ENST00000441074 E9PQ18 207 aa11.56□□□□□ -0.56
LTBR-203ENST00000441074 RPP40O75818 363 aaKnown RBP11.56□□□□□ -0.56
LTBR-203ENST00000441074 MOCS2O96007 188 aaPredicted RBP11.56□□□□□ -0.56
LTBR-203ENST00000441074 DNTTP04053 509 aa11.56□□□□□ -0.56
LTBR-203ENST00000441074 ATXN1LP0C7T5 689 aaKnown RBP11.56□□□□□ -0.56
LTBR-203ENST00000441074 TYMPP19971 482 aa11.56□□□□□ -0.56
LTBR-203ENST00000441074 EPHA2P29317 976 aa11.56□□□□□ -0.56
LTBR-203ENST00000441074 PKLRP30613 574 aa11.56□□□□□ -0.56
LTBR-203ENST00000441074 HNF4AP41235 474 aa11.56□□□□□ -0.56
LTBR-203ENST00000441074 HTR6P50406 440 aa11.56□□□□□ -0.56
LTBR-203ENST00000441074 GZMMP51124 257 aa11.56□□□□□ -0.56
LTBR-203ENST00000441074 STC1P52823 247 aa11.56□□□□□ -0.56
LTBR-203ENST00000441074 DSC2Q02487 901 aa11.56□□□□□ -0.56
LTBR-203ENST00000441074 DUSP4Q13115 394 aa11.56□□□□□ -0.56
LTBR-203ENST00000441074 GTF2H3Q13889 308 aa11.56□□□□□ -0.56
LTBR-203ENST00000441074 LAPTM4AQ15012 233 aa11.56□□□□□ -0.56
LTBR-203ENST00000441074 NFE2Q16621 373 aaPredicted RBP11.56□□□□□ -0.56
LTBR-203ENST00000441074 PARP15Q460N3 678 aa11.56□□□□□ -0.56
LTBR-203ENST00000441074 RFTN2Q52LD8 501 aaPredicted RBP11.56□□□□□ -0.56
LTBR-203ENST00000441074 Q5BKY6 102 aa11.56□□□□□ -0.56
LTBR-203ENST00000441074 FUT10Q6P4F1 479 aa11.56□□□□□ -0.56
LTBR-203ENST00000441074 NPAS4Q8IUM7 802 aa11.56□□□□□ -0.56
LTBR-203ENST00000441074 NKAPQ8N5F7 415 aaKnown RBP11.56□□□□□ -0.56
LTBR-203ENST00000441074 METTL6Q8TCB7 284 aa11.56□□□□□ -0.56
LTBR-203ENST00000441074 HMCESQ96FZ2 354 aa11.56□□□□□ -0.56
LTBR-203ENST00000441074 NEDD4LQ96PU5 975 aa11.56□□□□□ -0.56
LTBR-203ENST00000441074 SLC30A2Q9BRI3 323 aa11.56□□□□□ -0.56
LTBR-203ENST00000441074 VN1R3Q9BXE9 311 aa11.56□□□□□ -0.56
LTBR-203ENST00000441074 GON7Q9BXV9 100 aa11.56□□□□□ -0.56
LTBR-203ENST00000441074 ZYG11BQ9C0D3 744 aa11.56□□□□□ -0.56
LTBR-203ENST00000441074 TRIM39Q9HCM9 518 aa11.56□□□□□ -0.56
LTBR-203ENST00000441074 GIMAP4Q9NUV9 329 aa11.56□□□□□ -0.56
LTBR-203ENST00000441074 UXTQ9UBK9 157 aaPredicted RBP11.56□□□□□ -0.56
LTBR-203ENST00000441074 EIF2B4Q9UI10 523 aaKnown RBP11.56□□□□□ -0.56
LTBR-203ENST00000441074 PSORS1C1Q9UIG5 152 aa11.56□□□□□ -0.56
LTBR-203ENST00000441074 A0A096LPI6 279 aa11.55□□□□□ -0.56
LTBR-203ENST00000441074 TRBV5-3A0A0A0MS03 114 aa11.55□□□□□ -0.56
LTBR-203ENST00000441074 A0A0U1RQS6 177 aa11.55□□□□□ -0.56
LTBR-203ENST00000441074 MEIOCA2RUB1 952 aa11.55□□□□□ -0.56
LTBR-203ENST00000441074 BTN3A1O00481 513 aa11.55□□□□□ -0.56
LTBR-203ENST00000441074 SLITRK5O94991 958 aa11.55□□□□□ -0.56
LTBR-203ENST00000441074 CAPN1P07384 714 aa11.55□□□□□ -0.56
LTBR-203ENST00000441074 C21orf33P30042 268 aaPredicted RBP11.55□□□□□ -0.56
LTBR-203ENST00000441074 MAXP61244 160 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms