RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 RPS13P62277 151 aaKnown RBP11.77□□□□□ -0.53
NEK1-201ENST00000439128 IRF9Q00978 393 aa11.77□□□□□ -0.53
NEK1-201ENST00000439128 HMGCS1Q01581 520 aa11.77□□□□□ -0.53
NEK1-201ENST00000439128 UBAP2Q5T6F2 1119 aaKnown RBP11.77□□□□□ -0.53
NEK1-201ENST00000439128 FRG2Q64ET8 278 aa11.77□□□□□ -0.53
NEK1-201ENST00000439128 TRABD2AQ86V40 505 aa11.77□□□□□ -0.53
NEK1-201ENST00000439128 LRRN4CLQ8ND94 238 aa11.77□□□□□ -0.53
NEK1-201ENST00000439128 TRPV1Q8NER1 839 aa11.77□□□□□ -0.53
NEK1-201ENST00000439128 FRG2BQ96QU4 278 aa11.77□□□□□ -0.53
NEK1-201ENST00000439128 EPYCQ99645 322 aa11.77□□□□□ -0.53
NEK1-201ENST00000439128 KIFC1Q9BW19 673 aa11.77□□□□□ -0.53
NEK1-201ENST00000439128 IRF2BPLQ9H1B7 796 aa11.77□□□□□ -0.53
NEK1-201ENST00000439128 NLE1Q9NVX2 485 aaPredicted RBP11.77□□□□□ -0.53
NEK1-201ENST00000439128 MARK1Q9P0L2 795 aa11.77□□□□□ -0.53
NEK1-201ENST00000439128 SLC17A6Q9P2U8 582 aa11.77□□□□□ -0.53
NEK1-201ENST00000439128 CNTN6Q9UQ52 1028 aa11.77□□□□□ -0.53
NEK1-201ENST00000439128 DHRS12A0PJE2 317 aa11.76□□□□□ -0.53
NEK1-201ENST00000439128 PROS1P07225 676 aa11.76□□□□□ -0.53
NEK1-201ENST00000439128 GLDCP23378 1020 aa11.76□□□□□ -0.53
NEK1-201ENST00000439128 PTCHD3Q3KNS1 767 aa11.76□□□□□ -0.53
NEK1-201ENST00000439128 FAM174BQ3ZCQ3 159 aa11.76□□□□□ -0.53
NEK1-201ENST00000439128 TXNRD3NBQ6F5E7 133 aa11.76□□□□□ -0.53
NEK1-201ENST00000439128 EIF1ADQ8N9N8 165 aaKnown RBP11.76□□□□□ -0.53
NEK1-201ENST00000439128 NAT14Q8WUY8 206 aa11.76□□□□□ -0.53
NEK1-201ENST00000439128 TRIM39Q9HCM9 518 aa11.76□□□□□ -0.53
NEK1-201ENST00000439128 TMLHEQ9NVH6 421 aa11.76□□□□□ -0.53
NEK1-201ENST00000439128 G3V2T6 193 aa11.76□□□□□ -0.53
NEK1-201ENST00000439128 NME6O75414 186 aaPredicted RBP11.76□□□□□ -0.53
NEK1-201ENST00000439128 RSL1D1O76021 490 aaKnown RBP11.76□□□□□ -0.53
NEK1-201ENST00000439128 CPNE6O95741 557 aa11.76□□□□□ -0.53
NEK1-201ENST00000439128 P04436 131 aa11.76□□□□□ -0.53
NEK1-201ENST00000439128 GDF5P43026 501 aa11.76□□□□□ -0.53
NEK1-201ENST00000439128 SRP54P61011 504 aaKnown RBP11.76□□□□□ -0.53
NEK1-201ENST00000439128 ACY1Q03154 408 aa11.76□□□□□ -0.53
NEK1-201ENST00000439128 SP140Q13342 867 aa11.76□□□□□ -0.53
NEK1-201ENST00000439128 OLIG2Q13516 323 aa11.76□□□□□ -0.53
NEK1-201ENST00000439128 EDAQ92838 391 aa11.76□□□□□ -0.53
NEK1-201ENST00000439128 LYARQ9NX58 379 aaKnown RBP11.76□□□□□ -0.53
NEK1-201ENST00000439128 MOCS1Q9NZB8 636 aa11.76□□□□□ -0.53
NEK1-201ENST00000439128 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.76□□□□□ -0.53
NEK1-201ENST00000439128 MBLAC1A4D2B0 266 aaPredicted RBP11.76□□□□□ -0.53
NEK1-201ENST00000439128 M0QZQ0 153 aa11.76□□□□□ -0.53
NEK1-201ENST00000439128 KHDRBS3O75525 346 aaKnown RBP11.76□□□□□ -0.53
NEK1-201ENST00000439128 SLC6A11P48066 632 aa11.76□□□□□ -0.53
NEK1-201ENST00000439128 C1orf94Q6P1W5 598 aa11.76□□□□□ -0.53
NEK1-201ENST00000439128 GALNT5Q7Z7M9 940 aa11.76□□□□□ -0.53
NEK1-201ENST00000439128 CHST14Q8NCH0 376 aa11.76□□□□□ -0.53
NEK1-201ENST00000439128 DNMT3BQ9UBC3 853 aaKnown RBP11.76□□□□□ -0.53
NEK1-201ENST00000439128 E7EQ34 232 aa11.76□□□□□ -0.53
NEK1-201ENST00000439128 SERPINA3P01011 423 aa11.76□□□□□ -0.53
NEK1-201ENST00000439128 TMED10P49755 219 aaKnown RBP11.76□□□□□ -0.53
NEK1-201ENST00000439128 SUOXP51687 545 aa11.76□□□□□ -0.53
NEK1-201ENST00000439128 PPP3R1P63098 170 aa11.76□□□□□ -0.53
NEK1-201ENST00000439128 SRYQ05066 204 aa11.76□□□□□ -0.53
NEK1-201ENST00000439128 TRAF3Q13114 568 aa11.76□□□□□ -0.53
NEK1-201ENST00000439128 ZNF311Q5JNZ3 666 aa11.76□□□□□ -0.53
NEK1-201ENST00000439128 ZNF662Q6ZS27 426 aa11.76□□□□□ -0.53
NEK1-201ENST00000439128 CLEC1AQ8NC01 280 aa11.76□□□□□ -0.53
NEK1-201ENST00000439128 ZSWIM3Q96MP5 696 aa11.76□□□□□ -0.53
NEK1-201ENST00000439128 CMKLR1Q99788 373 aa11.76□□□□□ -0.53
NEK1-201ENST00000439128 PLGRKTQ9HBL7 147 aa11.76□□□□□ -0.53
NEK1-201ENST00000439128 MAGEE1Q9HCI5 957 aa11.76□□□□□ -0.53
NEK1-201ENST00000439128 UPB1Q9UBR1 384 aa11.76□□□□□ -0.53
NEK1-201ENST00000439128 VGLL3A8MV65 326 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 FADS2P1A8MWK0 482 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 SCO2O43819 266 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 DRD4P21917 467 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 ALG1LQ6GMV1 187 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 TRMT10BQ6PF06 316 aaKnown RBP11.75□□□□□ -0.53
NEK1-201ENST00000439128 CPNE8Q86YQ8 564 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 TMEM151BQ8IW70 566 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 DHRS1Q96LJ7 313 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 SLC35A5Q9BS91 424 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 OR51V1Q9H2C8 321 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 REXO2Q9Y3B8 237 aaKnown RBP11.75□□□□□ -0.53
NEK1-201ENST00000439128 ARHGEF33A8MVX0 844 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 SLC26A3P40879 764 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 TRIM61Q5EBN2 209 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 MANEAQ5SRI9 462 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 PLEKHS1Q5SXH7 462 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 RAET1LQ5VY80 246 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 TMPRSS11AQ6ZMR5 421 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 ANKRD7Q92527 254 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 DAZLQ92904 295 aaKnown RBP11.75□□□□□ -0.53
NEK1-201ENST00000439128 COQ8BQ96D53 544 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 ASPNQ9BXN1 380 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 PPP4R1LQ9P1A2 415 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 PRODHO43272 600 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 IDH3BO43837 385 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 TGDSO95455 350 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 CHRM1P11229 460 aaPredicted RBP11.75□□□□□ -0.53
NEK1-201ENST00000439128 HSD11B1P28845 292 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 TNFRSF8P28908 595 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 P2RY2P41231 377 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 CDH12P55289 794 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 RPS3AP61247 264 aaKnown RBP11.75□□□□□ -0.53
NEK1-201ENST00000439128 VLDLRP98155 873 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 KPNB1Q14974 876 aaKnown RBP11.75□□□□□ -0.53
NEK1-201ENST00000439128 TIMM50Q3ZCQ8 353 aa11.75□□□□□ -0.53
NEK1-201ENST00000439128 TTC27Q6P3X3 843 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms