RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 GDE1Q9NZC3 331 aa3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 GAGE2DQ9UEU5 116 aa3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 ANAPC2Q9UJX6 822 aa3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 ZHX1Q9UKY1 873 aaPredicted RBP3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 WBP11Q9Y2W2 641 aaKnown RBP3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 JRKLQ9Y4A0 524 aa3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 NCAPD2Q15021 1401 aa3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 EDC4Q6P2E9 1401 aaKnown RBP3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 EYSQ5T1H1 3165 aa3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 RGPD2P0DJD1 1756 aa3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 ZNF646O15015 1829 aaPredicted RBP3.07□□□□□ -1.92
HMGB3P12-201ENST00000438745 ZFHX4Q86UP3 3567 aa3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 TEX13DA0A0J9YY54 714 aaPredicted RBP3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 TRBC2A0A5B9 178 aa3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 ELOVL7A1L3X0 281 aa3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 BDP1A6H8Y1 2624 aa3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 ANKUB1A6NFN9 424 aa3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 UBE2CO00762 179 aa3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 PFASO15067 1338 aa3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 ECE2O60344 883 aa3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 GPR137BO60478 399 aa3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 ZG16O60844 167 aa3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 CTSVO60911 334 aa3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 SLCO2B1O94956 709 aa3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 APOHP02749 345 aaPredicted RBP3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 APOA4P06727 396 aa3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 PRSS1P07477 247 aa3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 MYBL1P10243 752 aa3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 CSF2RAP15509 400 aa3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 PFKFB1P16118 471 aa3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 FLT4P35916 1363 aa3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 CCR3P51677 355 aa3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 TUBB4BP68371 445 aa3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 CDK3Q00526 305 aa3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 SLC39A6Q13433 755 aa3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 ALCAMQ13740 583 aa3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 FCN2Q15485 313 aa3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 DUOXA1Q1HG43 343 aa3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 CBWD6Q4V339 395 aa3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 CBWD3Q5JTY5 395 aa3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 RNASEH2BQ5TBB1 312 aaKnown RBP3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 SLC35E4Q6ICL7 350 aa3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 ASCL5Q7RTU5 278 aa3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 APOBEC3FQ8IUX4 373 aaKnown RBP3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 SLC4A11Q8NBS3 891 aa3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 OR5M8Q8NGP6 311 aa3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 PRUNE2Q8WUY3 3088 aa3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 MRPS27Q92552 414 aaKnown RBP3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 TAF15Q92804 592 aaKnown RBP eCLIP3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 BADQ92934 168 aa3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 VPS33AQ96AX1 596 aa3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 OPTNQ96CV9 577 aa3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 SPACA9Q96E40 222 aaPredicted RBP3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 RADILQ96JH8 1075 aa3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 CNDP2Q96KP4 475 aaKnown RBP3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 LINC00615Q96LM1 132 aaPredicted RBP3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 MS4A10Q96PG2 267 aa3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 NEK1Q96PY6 1258 aa3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 LITAFQ99732 161 aa3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 PSD2Q9BQI7 771 aa3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 NYXQ9GZU5 481 aa3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 ANKRD2Q9GZV1 360 aa3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 CNOT10Q9H9A5 744 aaKnown RBP3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 PELI2Q9HAT8 420 aa3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 EPG5Q9HCE0 2579 aa3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 SCRT2Q9NQ03 307 aa3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 OLAHQ9NV23 265 aa3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 NOTCH3Q9UM47 2321 aa3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 ATP6V0A2Q9Y487 856 aa3.06□□□□□ -1.92
HMGB3P12-201ENST00000438745 SSC5DA1L4H1 1573 aa3.05□□□□□ -1.92
HMGB3P12-201ENST00000438745 HYKKA2RU49 373 aa3.05□□□□□ -1.92
HMGB3P12-201ENST00000438745 TSPAN1O60635 241 aa3.05□□□□□ -1.92
HMGB3P12-201ENST00000438745 BAG4O95429 457 aaKnown RBP3.05□□□□□ -1.92
HMGB3P12-201ENST00000438745 LDLRP01130 860 aa3.05□□□□□ -1.92
HMGB3P12-201ENST00000438745 H1F0P07305 194 aaKnown RBP3.05□□□□□ -1.92
HMGB3P12-201ENST00000438745 AZGP1P25311 298 aaKnown RBP3.05□□□□□ -1.92
HMGB3P12-201ENST00000438745 ATP12AP54707 1039 aa3.05□□□□□ -1.92
HMGB3P12-201ENST00000438745 CSE1LP55060 971 aaKnown RBP3.05□□□□□ -1.92
HMGB3P12-201ENST00000438745 CDH11P55287 796 aa3.05□□□□□ -1.92
HMGB3P12-201ENST00000438745 DMPKQ09013 629 aa3.05□□□□□ -1.92
HMGB3P12-201ENST00000438745 RALGDSQ12967 914 aa3.05□□□□□ -1.92
HMGB3P12-201ENST00000438745 PPIGQ13427 754 aaKnown RBP eCLIP3.05□□□□□ -1.92
HMGB3P12-201ENST00000438745 CAMK2DQ13557 499 aa3.05□□□□□ -1.92
HMGB3P12-201ENST00000438745 KYNUQ16719 465 aa3.05□□□□□ -1.92
HMGB3P12-201ENST00000438745 CRY2Q49AN0 593 aa3.05□□□□□ -1.92
HMGB3P12-201ENST00000438745 TMPRSS11FQ6ZWK6 438 aa3.05□□□□□ -1.92
HMGB3P12-201ENST00000438745 ANO5Q75V66 913 aa3.05□□□□□ -1.92
HMGB3P12-201ENST00000438745 IQCHQ86VS3 1027 aa3.05□□□□□ -1.92
HMGB3P12-201ENST00000438745 KRTAP7-1Q8IUC3 87 aa3.05□□□□□ -1.92
HMGB3P12-201ENST00000438745 CFAP206Q8IYR0 622 aa3.05□□□□□ -1.92
HMGB3P12-201ENST00000438745 TTC5Q8N0Z6 440 aa3.05□□□□□ -1.92
HMGB3P12-201ENST00000438745 DNAJC22Q8N4W6 341 aa3.05□□□□□ -1.92
HMGB3P12-201ENST00000438745 TSPAN14Q8NG11 270 aa3.05□□□□□ -1.92
HMGB3P12-201ENST00000438745 OR10S1Q8NGN2 331 aa3.05□□□□□ -1.92
HMGB3P12-201ENST00000438745 RMDN1Q96DB5 314 aa3.05□□□□□ -1.92
HMGB3P12-201ENST00000438745 ZNF354BQ96LW1 612 aa3.05□□□□□ -1.92
HMGB3P12-201ENST00000438745 MOV10L1Q9BXT6 1211 aaKnown RBP3.05□□□□□ -1.92
HMGB3P12-201ENST00000438745 FAM129AQ9BZQ8 928 aa3.05□□□□□ -1.92
HMGB3P12-201ENST00000438745 GFRA4Q9GZZ7 299 aa3.05□□□□□ -1.92
HMGB3P12-201ENST00000438745 RABEP2Q9H5N1 569 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms