RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 OR6K6Q8NGW6 343 aa15.46■□□□□ 0.07
PTPN13-204ENST00000436978 AUTS2Q8WXX7 1259 aa15.46■□□□□ 0.07
PTPN13-204ENST00000436978 ZDHHC12Q96GR4 267 aa15.46■□□□□ 0.07
PTPN13-204ENST00000436978 ZSWIM3Q96MP5 696 aa15.46■□□□□ 0.07
PTPN13-204ENST00000436978 NKIRAS2Q9NYR9 191 aa15.46■□□□□ 0.07
PTPN13-204ENST00000436978 EEFSECP57772 596 aaKnown RBP15.46■□□□□ 0.07
PTPN13-204ENST00000436978 PUM1Q14671 1186 aaKnown RBP eCLIP15.46■□□□□ 0.07
PTPN13-204ENST00000436978 KCTD21Q4G0X4 260 aa15.46■□□□□ 0.07
PTPN13-204ENST00000436978 CILP2Q8IUL8 1156 aa15.46■□□□□ 0.07
PTPN13-204ENST00000436978 SLC35B2Q8TB61 432 aa15.46■□□□□ 0.07
PTPN13-204ENST00000436978 LRRC58Q96CX6 371 aa15.46■□□□□ 0.07
PTPN13-204ENST00000436978 LRIG1Q96JA1 1093 aa15.46■□□□□ 0.07
PTPN13-204ENST00000436978 KLK1P06870 262 aa15.46■□□□□ 0.07
PTPN13-204ENST00000436978 RYKP34925 604 aa15.46■□□□□ 0.07
PTPN13-204ENST00000436978 ZNF41P51814 821 aaPredicted RBP15.46■□□□□ 0.07
PTPN13-204ENST00000436978 SLC22A15Q8IZD6 547 aa15.46■□□□□ 0.07
PTPN13-204ENST00000436978 DAPL1A0PJW8 107 aa15.46■□□□□ 0.07
PTPN13-204ENST00000436978 GSRP00390 522 aa15.46■□□□□ 0.07
PTPN13-204ENST00000436978 IL1R2P27930 398 aa15.46■□□□□ 0.07
PTPN13-204ENST00000436978 RORCP51449 518 aa15.46■□□□□ 0.07
PTPN13-204ENST00000436978 CCNHP51946 323 aaPredicted RBP15.46■□□□□ 0.07
PTPN13-204ENST00000436978 CAND1Q86VP6 1230 aaKnown RBP15.46■□□□□ 0.07
PTPN13-204ENST00000436978 TMEM125Q96AQ2 219 aa15.46■□□□□ 0.07
PTPN13-204ENST00000436978 TYSND1Q2T9J0 566 aa15.46■□□□□ 0.06
PTPN13-204ENST00000436978 ITPRIPL2Q3MIP1 535 aa15.46■□□□□ 0.06
PTPN13-204ENST00000436978 GALNTL5Q7Z4T8 443 aa15.46■□□□□ 0.06
PTPN13-204ENST00000436978 RAB43Q86YS6 212 aa15.46■□□□□ 0.06
PTPN13-204ENST00000436978 OR52E4Q8NGH9 312 aa15.46■□□□□ 0.06
PTPN13-204ENST00000436978 OR9A1PQ8NGU1 263 aa15.46■□□□□ 0.06
PTPN13-204ENST00000436978 KLRF1Q9NZS2 232 aa15.46■□□□□ 0.06
PTPN13-204ENST00000436978 ALS2Q96Q42 1657 aa15.46■□□□□ 0.06
PTPN13-204ENST00000436978 PRAMEF11O60813 436 aa15.45■□□□□ 0.06
PTPN13-204ENST00000436978 CLDN7O95471 211 aa15.45■□□□□ 0.06
PTPN13-204ENST00000436978 TGFB1P01137 390 aa15.45■□□□□ 0.06
PTPN13-204ENST00000436978 PRKCGP05129 697 aa15.45■□□□□ 0.06
PTPN13-204ENST00000436978 HBEGFQ99075 208 aa15.45■□□□□ 0.06
PTPN13-204ENST00000436978 Q9N2J8 555 aa15.45■□□□□ 0.06
PTPN13-204ENST00000436978 ADAMTSL3P82987 1691 aa15.45■□□□□ 0.06
PTPN13-204ENST00000436978 NPIPA5E9PKD4 350 aa15.45■□□□□ 0.06
PTPN13-204ENST00000436978 HNRNPA1P09651 372 aaKnown RBP eCLIP15.45■□□□□ 0.06
PTPN13-204ENST00000436978 ADAM8P78325 824 aa15.45■□□□□ 0.06
PTPN13-204ENST00000436978 SCRN3Q0VDG4 424 aa15.45■□□□□ 0.06
PTPN13-204ENST00000436978 IQCHQ86VS3 1027 aa15.45■□□□□ 0.06
PTPN13-204ENST00000436978 PROKR2Q8NFJ6 384 aa15.45■□□□□ 0.06
PTPN13-204ENST00000436978 RAD9AQ99638 391 aa15.45■□□□□ 0.06
PTPN13-204ENST00000436978 NPIPA1Q9UND3 350 aa15.45■□□□□ 0.06
PTPN13-204ENST00000436978 MMP20O60882 483 aa15.45■□□□□ 0.06
PTPN13-204ENST00000436978 NCK1P16333 377 aa15.45■□□□□ 0.06
PTPN13-204ENST00000436978 TCEA1P23193 301 aaKnown RBP15.45■□□□□ 0.06
PTPN13-204ENST00000436978 FITM2Q8N6M3 262 aa15.45■□□□□ 0.06
PTPN13-204ENST00000436978 CLEC4AQ9UMR7 237 aa15.45■□□□□ 0.06
PTPN13-204ENST00000436978 VEGFDO43915 354 aa15.45■□□□□ 0.06
PTPN13-204ENST00000436978 SEMA3DO95025 777 aa15.45■□□□□ 0.06
PTPN13-204ENST00000436978 ITGA3P26006 1051 aa15.45■□□□□ 0.06
PTPN13-204ENST00000436978 OXTRP30559 389 aa15.45■□□□□ 0.06
PTPN13-204ENST00000436978 DNAJA4Q8WW22 397 aaPredicted RBP15.45■□□□□ 0.06
PTPN13-204ENST00000436978 SMPDL3BQ92485 455 aa15.45■□□□□ 0.06
PTPN13-204ENST00000436978 LDAHQ9H6V9 325 aa15.45■□□□□ 0.06
PTPN13-204ENST00000436978 TAC3Q9UHF0 121 aa15.45■□□□□ 0.06
PTPN13-204ENST00000436978 MEMO1Q9Y316 297 aa15.45■□□□□ 0.06
PTPN13-204ENST00000436978 CPSF4LA6NMK7 179 aaKnown RBP15.45■□□□□ 0.06
PTPN13-204ENST00000436978 TRMT10BQ6PF06 316 aaKnown RBP15.45■□□□□ 0.06
PTPN13-204ENST00000436978 ASB9Q96DX5 294 aa15.45■□□□□ 0.06
PTPN13-204ENST00000436978 POLR2J3Q9H1A7 115 aaKnown RBP15.45■□□□□ 0.06
PTPN13-204ENST00000436978 PCDHGB2Q9Y5G2 931 aa15.45■□□□□ 0.06
PTPN13-204ENST00000436978 TOR1AIP1Q5JTV8 583 aa15.45■□□□□ 0.06
PTPN13-204ENST00000436978 POF1BQ8WVV4 589 aa15.45■□□□□ 0.06
PTPN13-204ENST00000436978 TRIB3Q96RU7 358 aa15.45■□□□□ 0.06
PTPN13-204ENST00000436978 OR51V1Q9H2C8 321 aa15.45■□□□□ 0.06
PTPN13-204ENST00000436978 SALL4Q9UJQ4 1053 aa15.45■□□□□ 0.06
PTPN13-204ENST00000436978 GMEB2Q9UKD1 530 aa15.45■□□□□ 0.06
PTPN13-204ENST00000436978 LCHNA4D1U4 455 aa15.45■□□□□ 0.06
PTPN13-204ENST00000436978 SMSP52788 366 aa15.45■□□□□ 0.06
PTPN13-204ENST00000436978 ROR2Q01974 943 aaKnown RBP15.45■□□□□ 0.06
PTPN13-204ENST00000436978 LMX1AQ8TE12 382 aa15.45■□□□□ 0.06
PTPN13-204ENST00000436978 SLC39A3Q9BRY0 314 aa15.45■□□□□ 0.06
PTPN13-204ENST00000436978 ASPNQ9BXN1 380 aa15.45■□□□□ 0.06
PTPN13-204ENST00000436978 GKN1Q9NS71 199 aa15.45■□□□□ 0.06
PTPN13-204ENST00000436978 GRIP1Q9Y3R0 1128 aa15.45■□□□□ 0.06
PTPN13-204ENST00000436978 FKBP7Q9Y680 259 aa15.45■□□□□ 0.06
PTPN13-204ENST00000436978 EPOP01588 193 aa15.44■□□□□ 0.06
PTPN13-204ENST00000436978 MLLT6P55198 1093 aaPredicted RBP15.44■□□□□ 0.06
PTPN13-204ENST00000436978 RNF19BQ6ZMZ0 732 aa15.44■□□□□ 0.06
PTPN13-204ENST00000436978 SETD7Q8WTS6 366 aaKnown RBP15.44■□□□□ 0.06
PTPN13-204ENST00000436978 GTPBP2Q9BX10 602 aaKnown RBP15.44■□□□□ 0.06
PTPN13-204ENST00000436978 ELAC1Q9H777 363 aaKnown RBP15.44■□□□□ 0.06
PTPN13-204ENST00000436978 SLC22A14Q9Y267 594 aa15.44■□□□□ 0.06
PTPN13-204ENST00000436978 KLHL33A6NCF5 533 aa15.44■□□□□ 0.06
PTPN13-204ENST00000436978 AQP12BA6NM10 295 aa15.44■□□□□ 0.06
PTPN13-204ENST00000436978 CLIC1O00299 241 aa15.44■□□□□ 0.06
PTPN13-204ENST00000436978 AKIRIN2Q53H80 203 aa15.44■□□□□ 0.06
PTPN13-204ENST00000436978 ZNF805Q5CZA5 627 aa15.44■□□□□ 0.06
PTPN13-204ENST00000436978 GOLGA7Q7Z5G4 137 aa15.44■□□□□ 0.06
PTPN13-204ENST00000436978 AQP12AQ8IXF9 295 aa15.44■□□□□ 0.06
PTPN13-204ENST00000436978 PRSS58Q8IYP2 241 aa15.44■□□□□ 0.06
PTPN13-204ENST00000436978 TNFAIP8L1Q8WVP5 186 aa15.44■□□□□ 0.06
PTPN13-204ENST00000436978 MED28Q9H204 178 aa15.44■□□□□ 0.06
PTPN13-204ENST00000436978 ZCCHC3Q9NUD5 404 aaKnown RBP15.44■□□□□ 0.06
PTPN13-204ENST00000436978 FAM120CQ9NX05 1096 aaKnown RBP15.44■□□□□ 0.06
PTPN13-204ENST00000436978 PHF24Q9UPV7 400 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms