RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 SOAT1P35610 550 aa15.11■□□□□ 0.01
SCARF1-203ENST00000434376 MC1RQ01726 317 aa15.11■□□□□ 0.01
SCARF1-203ENST00000434376 OCA2Q04671 838 aa15.11■□□□□ 0.01
SCARF1-203ENST00000434376 EMX2Q04743 252 aa15.11■□□□□ 0.01
SCARF1-203ENST00000434376 LRRC74AQ0VAA2 488 aa15.11■□□□□ 0.01
SCARF1-203ENST00000434376 NFATC3Q12968 1075 aa15.11■□□□□ 0.01
SCARF1-203ENST00000434376 PRR23BQ6ZRT6 265 aa15.11■□□□□ 0.01
SCARF1-203ENST00000434376 SMG7Q92540 1137 aaKnown RBP15.11■□□□□ 0.01
SCARF1-203ENST00000434376 SLC32A1Q9H598 525 aa15.11■□□□□ 0.01
SCARF1-203ENST00000434376 C11orf49Q9H6J7 331 aa15.11■□□□□ 0.01
SCARF1-203ENST00000434376 SMPD3Q9NY59 655 aaPredicted RBP15.11■□□□□ 0.01
SCARF1-203ENST00000434376 CNOT11Q9UKZ1 510 aaKnown RBP15.11■□□□□ 0.01
SCARF1-203ENST00000434376 SNX8Q9Y5X2 465 aa15.11■□□□□ 0.01
SCARF1-203ENST00000434376 C16orf96A6NNT2 1141 aa15.11■□□□□ 0.01
SCARF1-203ENST00000434376 MAGEB17A8MXT2 336 aa15.11■□□□□ 0.01
SCARF1-203ENST00000434376 JAK1P23458 1154 aa15.11■□□□□ 0.01
SCARF1-203ENST00000434376 PPM1AP35813 382 aa15.11■□□□□ 0.01
SCARF1-203ENST00000434376 ZFP36L2P47974 494 aaKnown RBP15.11■□□□□ 0.01
SCARF1-203ENST00000434376 DGKGP49619 791 aa15.11■□□□□ 0.01
SCARF1-203ENST00000434376 GSTM4Q03013 218 aa15.11■□□□□ 0.01
SCARF1-203ENST00000434376 DGCR6Q14129 220 aa15.11■□□□□ 0.01
SCARF1-203ENST00000434376 EFL1Q7Z2Z2 1120 aaKnown RBP15.11■□□□□ 0.01
SCARF1-203ENST00000434376 C1orf52Q8N6N3 182 aaKnown RBP15.11■□□□□ 0.01
SCARF1-203ENST00000434376 GTF2H4Q92759 462 aa15.11■□□□□ 0.01
SCARF1-203ENST00000434376 RIBC2Q9H4K1 309 aa15.11■□□□□ 0.01
SCARF1-203ENST00000434376 RUBCNLQ9H714 662 aa15.11■□□□□ 0.01
SCARF1-203ENST00000434376 TM7SF3Q9NS93 570 aa15.11■□□□□ 0.01
SCARF1-203ENST00000434376 ZNF229Q9UJW7 825 aa15.11■□□□□ 0.01
SCARF1-203ENST00000434376 ERVW-1Q9UQF0 538 aa15.11■□□□□ 0.01
SCARF1-203ENST00000434376 SEC16AO15027 2179 aa15.11■□□□□ 0.01
SCARF1-203ENST00000434376 CKAP5Q14008 2032 aa15.11■□□□□ 0.01
SCARF1-203ENST00000434376 TRANK1O15050 2925 aa15.11■□□□□ 0.01
SCARF1-203ENST00000434376 ARHGEF33A8MVX0 844 aa15.1■□□□□ 0.01
SCARF1-203ENST00000434376 VPS4BO75351 444 aa15.1■□□□□ 0.01
SCARF1-203ENST00000434376 EEDO75530 441 aaKnown RBP15.1■□□□□ 0.01
SCARF1-203ENST00000434376 TIMP1P01033 207 aa15.1■□□□□ 0.01
SCARF1-203ENST00000434376 PTPN2P17706 415 aa15.1■□□□□ 0.01
SCARF1-203ENST00000434376 GPR1P46091 355 aa15.1■□□□□ 0.01
SCARF1-203ENST00000434376 FAM98BQ52LJ0 330 aaKnown RBP15.1■□□□□ 0.01
SCARF1-203ENST00000434376 CES5AQ6NT32 575 aa15.1■□□□□ 0.01
SCARF1-203ENST00000434376 GALNT7Q86SF2 657 aa15.1■□□□□ 0.01
SCARF1-203ENST00000434376 ADIPOR2Q86V24 386 aa15.1■□□□□ 0.01
SCARF1-203ENST00000434376 PPP1R14BQ96C90 147 aa15.1■□□□□ 0.01
SCARF1-203ENST00000434376 NRBF2Q96F24 287 aa15.1■□□□□ 0.01
SCARF1-203ENST00000434376 NUSAP1Q9BXS6 441 aaKnown RBP15.1■□□□□ 0.01
SCARF1-203ENST00000434376 NME6O75414 186 aaPredicted RBP15.1■□□□□ 0.01
SCARF1-203ENST00000434376 GSTT2P0CG29 244 aa15.1■□□□□ 0.01
SCARF1-203ENST00000434376 GSTT2BP0CG30 244 aa15.1■□□□□ 0.01
SCARF1-203ENST00000434376 CYP2A7P20853 494 aa15.1■□□□□ 0.01
SCARF1-203ENST00000434376 SEC13P55735 322 aa15.1■□□□□ 0.01
SCARF1-203ENST00000434376 CNTN1Q12860 1018 aa15.1■□□□□ 0.01
SCARF1-203ENST00000434376 TRAP1Q12931 704 aaKnown RBP15.1■□□□□ 0.01
SCARF1-203ENST00000434376 RD3Q7Z3Z2 195 aa15.1■□□□□ 0.01
SCARF1-203ENST00000434376 ZDHHC13Q8IUH4 622 aa15.1■□□□□ 0.01
SCARF1-203ENST00000434376 MMP21Q8N119 569 aa15.1■□□□□ 0.01
SCARF1-203ENST00000434376 RASGEF1AQ8N9B8 481 aa15.1■□□□□ 0.01
SCARF1-203ENST00000434376 ZNF689Q96CS4 500 aaPredicted RBP15.1■□□□□ 0.01
SCARF1-203ENST00000434376 ZNF583Q96ND8 569 aa15.1■□□□□ 0.01
SCARF1-203ENST00000434376 BARD1Q99728 777 aaKnown RBP15.1■□□□□ 0.01
SCARF1-203ENST00000434376 ELOVL7A1L3X0 281 aa15.1■□□□□ 0.01
SCARF1-203ENST00000434376 PRRT4C9JH25 899 aa15.1■□□□□ 0.01
SCARF1-203ENST00000434376 CXCR6O00574 342 aa15.1■□□□□ 0.01
SCARF1-203ENST00000434376 TULP3O75386 442 aa15.1■□□□□ 0.01
SCARF1-203ENST00000434376 MATN4O95460 622 aa15.1■□□□□ 0.01
SCARF1-203ENST00000434376 FTH1P02794 183 aa15.1■□□□□ 0.01
SCARF1-203ENST00000434376 POU2F1P14859 743 aa15.1■□□□□ 0.01
SCARF1-203ENST00000434376 PCYT1AP49585 367 aa15.1■□□□□ 0.01
SCARF1-203ENST00000434376 TMEM115Q12893 351 aaPredicted RBP15.1■□□□□ 0.01
SCARF1-203ENST00000434376 MEP1AQ16819 746 aa15.1■□□□□ 0.01
SCARF1-203ENST00000434376 SLC47A1Q96FL8 570 aa15.1■□□□□ 0.01
SCARF1-203ENST00000434376 BTBD3Q9Y2F9 522 aa15.1■□□□□ 0.01
SCARF1-203ENST00000434376 ETHE1O95571 254 aa15.09■□□□□ 0.01
SCARF1-203ENST00000434376 EPHX1P07099 455 aa15.09■□□□□ 0.01
SCARF1-203ENST00000434376 EN2P19622 333 aaPredicted RBP15.09■□□□□ 0.01
SCARF1-203ENST00000434376 RFC2P35250 354 aa15.09■□□□□ 0.01
SCARF1-203ENST00000434376 CAPGP40121 348 aa15.09■□□□□ 0.01
SCARF1-203ENST00000434376 OR1E2P47887 323 aa15.09■□□□□ 0.01
SCARF1-203ENST00000434376 PSMD8P48556 350 aa15.09■□□□□ 0.01
SCARF1-203ENST00000434376 BNIP2Q12982 314 aa15.09■□□□□ 0.01
SCARF1-203ENST00000434376 DOC2AQ14183 400 aa15.09■□□□□ 0.01
SCARF1-203ENST00000434376 NFE2L1Q14494 772 aa15.09■□□□□ 0.01
SCARF1-203ENST00000434376 PCBP2Q15366 365 aaKnown RBP eCLIP15.09■□□□□ 0.01
SCARF1-203ENST00000434376 AASDHQ4L235 1098 aaPredicted RBP15.09■□□□□ 0.01
SCARF1-203ENST00000434376 TMEM31Q5JXX7 168 aa15.09■□□□□ 0.01
SCARF1-203ENST00000434376 PRMT9Q6P2P2 845 aa15.09■□□□□ 0.01
SCARF1-203ENST00000434376 FAM124AQ86V42 546 aa15.09■□□□□ 0.01
SCARF1-203ENST00000434376 IGFN1Q86VF2 1251 aa15.09■□□□□ 0.01
SCARF1-203ENST00000434376 RAD21L1Q9H4I0 556 aa15.09■□□□□ 0.01
SCARF1-203ENST00000434376 DNAJC11Q9NVH1 559 aa15.09■□□□□ 0.01
SCARF1-203ENST00000434376 HTR3EA5X5Y0 456 aa15.09■□□□□ 0.01
SCARF1-203ENST00000434376 H7C0S8 307 aa15.09■□□□□ 0.01
SCARF1-203ENST00000434376 AREL1O15033 823 aa15.09■□□□□ 0.01
SCARF1-203ENST00000434376 XPNPEP2O43895 674 aa15.09■□□□□ 0.01
SCARF1-203ENST00000434376 LAMP1P11279 417 aa15.09■□□□□ 0.01
SCARF1-203ENST00000434376 ACPPP15309 386 aa15.09■□□□□ 0.01
SCARF1-203ENST00000434376 ZNF12P17014 697 aa15.09■□□□□ 0.01
SCARF1-203ENST00000434376 SDC1P18827 310 aa15.09■□□□□ 0.01
SCARF1-203ENST00000434376 EPORP19235 508 aa15.09■□□□□ 0.01
SCARF1-203ENST00000434376 POLR2LP62875 67 aaKnown RBP15.09■□□□□ 0.01
SCARF1-203ENST00000434376 DHCR24Q15392 516 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms