RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 Q6ZNB5 142 aa12.94□□□□□ -0.34
MCF2L-213ENST00000421756 CACTIN-AS1Q8N1I8 211 aa12.94□□□□□ -0.34
MCF2L-213ENST00000421756 ARL10Q8N8L6 244 aa12.94□□□□□ -0.34
MCF2L-213ENST00000421756 UTP15Q8TED0 518 aaKnown RBP12.94□□□□□ -0.34
MCF2L-213ENST00000421756 REXO5Q96IC2 774 aaKnown RBP12.94□□□□□ -0.34
MCF2L-213ENST00000421756 MACROD1Q9BQ69 325 aa12.94□□□□□ -0.34
MCF2L-213ENST00000421756 GRM6O15303 877 aa12.94□□□□□ -0.34
MCF2L-213ENST00000421756 LZTS3O60299 673 aaPredicted RBP12.94□□□□□ -0.34
MCF2L-213ENST00000421756 VIPP01282 170 aa12.94□□□□□ -0.34
MCF2L-213ENST00000421756 IL6P05231 212 aa12.94□□□□□ -0.34
MCF2L-213ENST00000421756 RHOP08100 348 aa12.94□□□□□ -0.34
MCF2L-213ENST00000421756 DCTP40126 519 aa12.94□□□□□ -0.34
MCF2L-213ENST00000421756 NKX3-2P78367 333 aa12.94□□□□□ -0.34
MCF2L-213ENST00000421756 ITGADQ13349 1161 aa12.94□□□□□ -0.34
MCF2L-213ENST00000421756 CARTPTQ16568 116 aa12.94□□□□□ -0.34
MCF2L-213ENST00000421756 ZBED5Q49AG3 693 aa12.94□□□□□ -0.34
MCF2L-213ENST00000421756 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.94□□□□□ -0.34
MCF2L-213ENST00000421756 KLHL35Q6PF15 583 aa12.94□□□□□ -0.34
MCF2L-213ENST00000421756 ZNF852Q6ZMS4 543 aa12.94□□□□□ -0.34
MCF2L-213ENST00000421756 OLIG3Q7RTU3 272 aa12.94□□□□□ -0.34
MCF2L-213ENST00000421756 SPRED1Q7Z699 444 aa12.94□□□□□ -0.34
MCF2L-213ENST00000421756 NCSTNQ92542 709 aa12.94□□□□□ -0.34
MCF2L-213ENST00000421756 KAT8Q9H7Z6 458 aaKnown RBP12.94□□□□□ -0.34
MCF2L-213ENST00000421756 CTPS2Q9NRF8 586 aa12.94□□□□□ -0.34
MCF2L-213ENST00000421756 ATXN10Q9UBB4 475 aa12.94□□□□□ -0.34
MCF2L-213ENST00000421756 PTNP21246 168 aa12.93□□□□□ -0.34
MCF2L-213ENST00000421756 VLDLRP98155 873 aa12.93□□□□□ -0.34
MCF2L-213ENST00000421756 FOXM1Q08050 763 aa12.93□□□□□ -0.34
MCF2L-213ENST00000421756 CNTN1Q12860 1018 aa12.93□□□□□ -0.34
MCF2L-213ENST00000421756 CDKN3Q16667 212 aa12.93□□□□□ -0.34
MCF2L-213ENST00000421756 SYT16Q17RD7 645 aa12.93□□□□□ -0.34
MCF2L-213ENST00000421756 CCNYL2Q5T2Q4 361 aa12.93□□□□□ -0.34
MCF2L-213ENST00000421756 MACC1Q6ZN28 852 aa12.93□□□□□ -0.34
MCF2L-213ENST00000421756 MFSD2AQ8NA29 543 aa12.93□□□□□ -0.34
MCF2L-213ENST00000421756 IRF7Q92985 503 aa12.93□□□□□ -0.34
MCF2L-213ENST00000421756 GLMNQ92990 594 aa12.93□□□□□ -0.34
MCF2L-213ENST00000421756 CIDECQ96AQ7 238 aaPredicted RBP12.93□□□□□ -0.34
MCF2L-213ENST00000421756 SH2B3Q9UQQ2 575 aa12.93□□□□□ -0.34
MCF2L-213ENST00000421756 EPN2O95208 641 aa12.93□□□□□ -0.34
MCF2L-213ENST00000421756 CTSLP07711 333 aa12.93□□□□□ -0.34
MCF2L-213ENST00000421756 IGFBP5P24593 272 aa12.93□□□□□ -0.34
MCF2L-213ENST00000421756 NAA20P61599 178 aa12.93□□□□□ -0.34
MCF2L-213ENST00000421756 GPR33Q49SQ1 333 aa12.93□□□□□ -0.34
MCF2L-213ENST00000421756 CNKSR3Q6P9H4 555 aa12.93□□□□□ -0.34
MCF2L-213ENST00000421756 PTRH1Q86Y79 214 aaKnown RBP12.93□□□□□ -0.34
MCF2L-213ENST00000421756 NLGN4XQ8N0W4 816 aa12.93□□□□□ -0.34
MCF2L-213ENST00000421756 RASGEF1AQ8N9B8 481 aa12.93□□□□□ -0.34
MCF2L-213ENST00000421756 BPIFB1Q8TDL5 484 aa12.93□□□□□ -0.34
MCF2L-213ENST00000421756 ASZ1Q8WWH4 475 aa12.93□□□□□ -0.34
MCF2L-213ENST00000421756 OVCA2Q8WZ82 227 aa12.93□□□□□ -0.34
MCF2L-213ENST00000421756 KCNC2Q96PR1 638 aa12.93□□□□□ -0.34
MCF2L-213ENST00000421756 OSGEPL1Q9H4B0 414 aa12.93□□□□□ -0.34
MCF2L-213ENST00000421756 CLMPQ9H6B4 373 aa12.93□□□□□ -0.34
MCF2L-213ENST00000421756 RMND5AQ9H871 391 aa12.93□□□□□ -0.34
MCF2L-213ENST00000421756 LOC100130705A0A1B0GUX0 176 aa12.92□□□□□ -0.34
MCF2L-213ENST00000421756 H0Y858 1186 aa12.92□□□□□ -0.34
MCF2L-213ENST00000421756 HSMCR30P0CW71 290 aa12.92□□□□□ -0.34
MCF2L-213ENST00000421756 ALPPL2P10696 532 aa12.92□□□□□ -0.34
MCF2L-213ENST00000421756 ALDH3B2P48448 385 aa12.92□□□□□ -0.34
MCF2L-213ENST00000421756 RUNDC3AQ59EK9 446 aa12.92□□□□□ -0.34
MCF2L-213ENST00000421756 ACBD5Q5T8D3 534 aaPredicted RBP12.92□□□□□ -0.34
MCF2L-213ENST00000421756 ASB11Q8WXH4 323 aa12.92□□□□□ -0.34
MCF2L-213ENST00000421756 NEIL2Q969S2 332 aa12.92□□□□□ -0.34
MCF2L-213ENST00000421756 C1QTNF3Q9BXJ4 246 aa12.92□□□□□ -0.34
MCF2L-213ENST00000421756 ERVK-18Q9QC07 812 aa12.92□□□□□ -0.34
MCF2L-213ENST00000421756 DNAJB9Q9UBS3 223 aa12.92□□□□□ -0.34
MCF2L-213ENST00000421756 BCKDKO14874 412 aa12.92□□□□□ -0.34
MCF2L-213ENST00000421756 TPST2O60704 377 aa12.92□□□□□ -0.34
MCF2L-213ENST00000421756 CHRM5P08912 532 aaPredicted RBP12.92□□□□□ -0.34
MCF2L-213ENST00000421756 LAG3P18627 525 aa12.92□□□□□ -0.34
MCF2L-213ENST00000421756 SLC19A1P41440 591 aa12.92□□□□□ -0.34
MCF2L-213ENST00000421756 CSNK1DP48730 415 aa12.92□□□□□ -0.34
MCF2L-213ENST00000421756 MAD2L1Q13257 205 aaPredicted RBP12.92□□□□□ -0.34
MCF2L-213ENST00000421756 LRRC26Q2I0M4 334 aa12.92□□□□□ -0.34
MCF2L-213ENST00000421756 AHSA2Q719I0 299 aa12.92□□□□□ -0.34
MCF2L-213ENST00000421756 ISG20Q96AZ6 181 aaKnown RBP12.92□□□□□ -0.34
MCF2L-213ENST00000421756 THG1LQ9NWX6 298 aaKnown RBP12.92□□□□□ -0.34
MCF2L-213ENST00000421756 DNMT3BQ9UBC3 853 aaKnown RBP12.92□□□□□ -0.34
MCF2L-213ENST00000421756 A0A0J9YVX5 310 aa12.92□□□□□ -0.34
MCF2L-213ENST00000421756 TRIM43BA6NCK2 446 aa12.92□□□□□ -0.34
MCF2L-213ENST00000421756 WASHC1A8K0Z3 465 aa12.92□□□□□ -0.34
MCF2L-213ENST00000421756 ADH1AP07327 375 aa12.92□□□□□ -0.34
MCF2L-213ENST00000421756 UMPSP11172 480 aa12.92□□□□□ -0.34
MCF2L-213ENST00000421756 SLC6A11P48066 632 aa12.92□□□□□ -0.34
MCF2L-213ENST00000421756 TMEM115Q12893 351 aaPredicted RBP12.92□□□□□ -0.34
MCF2L-213ENST00000421756 KIAA0040Q15053 153 aa12.92□□□□□ -0.34
MCF2L-213ENST00000421756 WASH2PQ6VEQ5 465 aa12.92□□□□□ -0.34
MCF2L-213ENST00000421756 CYP4Z1Q86W10 505 aa12.92□□□□□ -0.34
MCF2L-213ENST00000421756 ADHFE1Q8IWW8 467 aa12.92□□□□□ -0.34
MCF2L-213ENST00000421756 RIMKLAQ8IXN7 391 aa12.92□□□□□ -0.34
MCF2L-213ENST00000421756 ZNF540Q8NDQ6 660 aa12.92□□□□□ -0.34
MCF2L-213ENST00000421756 HM13Q8TCT9 377 aa12.92□□□□□ -0.34
MCF2L-213ENST00000421756 TRIM43Q96BQ3 446 aaPredicted RBP12.92□□□□□ -0.34
MCF2L-213ENST00000421756 TRMT2BQ96GJ1 504 aaKnown RBP12.92□□□□□ -0.34
MCF2L-213ENST00000421756 HSH2DQ96JZ2 352 aa12.92□□□□□ -0.34
MCF2L-213ENST00000421756 HEPHQ9BQS7 1158 aa12.92□□□□□ -0.34
MCF2L-213ENST00000421756 SELENONQ9NZV5 590 aa12.92□□□□□ -0.34
MCF2L-213ENST00000421756 VPS29Q9UBQ0 182 aa12.92□□□□□ -0.34
MCF2L-213ENST00000421756 NEUROG3Q9Y4Z2 214 aa12.92□□□□□ -0.34
MCF2L-213ENST00000421756 LAMA1P25391 3075 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms