RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 GMPPBQ9Y5P6 360 aa14.05□□□□□ -0.16
HDAC9-208ENST00000417496 C5orf42Q9H799 3197 aa14.05□□□□□ -0.16
HDAC9-208ENST00000417496 TMEM247A6NEH6 219 aa14.04□□□□□ -0.16
HDAC9-208ENST00000417496 TMEM202A6NGA9 273 aa14.04□□□□□ -0.16
HDAC9-208ENST00000417496 EFEMP2O95967 443 aa14.04□□□□□ -0.16
HDAC9-208ENST00000417496 IGSF6O95976 241 aa14.04□□□□□ -0.16
HDAC9-208ENST00000417496 MT-ND2P03891 347 aa14.04□□□□□ -0.16
HDAC9-208ENST00000417496 NTRK1P04629 796 aa14.04□□□□□ -0.16
HDAC9-208ENST00000417496 UGT2B4P06133 528 aa14.04□□□□□ -0.16
HDAC9-208ENST00000417496 LAMP1P11279 417 aa14.04□□□□□ -0.16
HDAC9-208ENST00000417496 KDELR2P33947 212 aa14.04□□□□□ -0.16
HDAC9-208ENST00000417496 CD97P48960 835 aa14.04□□□□□ -0.16
HDAC9-208ENST00000417496 SLC35A2P78381 396 aa14.04□□□□□ -0.16
HDAC9-208ENST00000417496 GSTM4Q03013 218 aa14.04□□□□□ -0.16
HDAC9-208ENST00000417496 TOP3AQ13472 1001 aaPredicted RBP14.04□□□□□ -0.16
HDAC9-208ENST00000417496 VMACQ2NL98 169 aa14.04□□□□□ -0.16
HDAC9-208ENST00000417496 PLEKHG6Q3KR16 790 aa14.04□□□□□ -0.16
HDAC9-208ENST00000417496 PAGE2BQ5JRK9 111 aa14.04□□□□□ -0.16
HDAC9-208ENST00000417496 LYPLAL1Q5VWZ2 237 aa14.04□□□□□ -0.16
HDAC9-208ENST00000417496 KDM4DQ6B0I6 523 aa14.04□□□□□ -0.16
HDAC9-208ENST00000417496 PTOV1Q86YD1 416 aa14.04□□□□□ -0.16
HDAC9-208ENST00000417496 HS6ST3Q8IZP7 471 aa14.04□□□□□ -0.16
HDAC9-208ENST00000417496 TTC29Q8NA56 475 aaPredicted RBP14.04□□□□□ -0.16
HDAC9-208ENST00000417496 ATG16L2Q8NAA4 619 aa14.04□□□□□ -0.16
HDAC9-208ENST00000417496 FBLIM1Q8WUP2 373 aa14.04□□□□□ -0.16
HDAC9-208ENST00000417496 CMTM7Q96FZ5 175 aa14.04□□□□□ -0.16
HDAC9-208ENST00000417496 HSH2DQ96JZ2 352 aa14.04□□□□□ -0.16
HDAC9-208ENST00000417496 ZNF641Q96N77 438 aaPredicted RBP14.04□□□□□ -0.16
HDAC9-208ENST00000417496 ZNF347Q96SE7 839 aa14.04□□□□□ -0.16
HDAC9-208ENST00000417496 NEURL2Q9BR09 285 aa14.04□□□□□ -0.16
HDAC9-208ENST00000417496 ABCB8Q9NUT2 735 aa14.04□□□□□ -0.16
HDAC9-208ENST00000417496 SLCO3A1Q9UIG8 710 aa14.04□□□□□ -0.16
HDAC9-208ENST00000417496 PMF1-BGLAPU3KQ54 211 aa14.04□□□□□ -0.16
HDAC9-208ENST00000417496 OR2AG2A6NM03 316 aa14.04□□□□□ -0.16
HDAC9-208ENST00000417496 SOBPA7XYQ1 873 aa14.04□□□□□ -0.16
HDAC9-208ENST00000417496 CLDN25C9JDP6 229 aa14.04□□□□□ -0.16
HDAC9-208ENST00000417496 SCN2BO60939 215 aa14.04□□□□□ -0.16
HDAC9-208ENST00000417496 NADKO95544 446 aaPredicted RBP14.04□□□□□ -0.16
HDAC9-208ENST00000417496 SRCP12931 536 aa14.04□□□□□ -0.16
HDAC9-208ENST00000417496 WNT3P56703 355 aa14.04□□□□□ -0.16
HDAC9-208ENST00000417496 CBX3Q13185 183 aa14.04□□□□□ -0.16
HDAC9-208ENST00000417496 RNF165Q6ZSG1 346 aa14.04□□□□□ -0.16
HDAC9-208ENST00000417496 TPRG1Q6ZUI0 275 aa14.04□□□□□ -0.16
HDAC9-208ENST00000417496 ZZZ3Q8IYH5 903 aa14.04□□□□□ -0.16
HDAC9-208ENST00000417496 TRMT2BQ96GJ1 504 aaKnown RBP14.04□□□□□ -0.16
HDAC9-208ENST00000417496 AMBNQ9NP70 447 aa14.04□□□□□ -0.16
HDAC9-208ENST00000417496 M0R3G1 203 aa14.03□□□□□ -0.16
HDAC9-208ENST00000417496 SOCS5O75159 536 aa14.03□□□□□ -0.16
HDAC9-208ENST00000417496 FABP3P05413 133 aa14.03□□□□□ -0.16
HDAC9-208ENST00000417496 LCKP06239 509 aa14.03□□□□□ -0.16
HDAC9-208ENST00000417496 ITGAMP11215 1152 aa14.03□□□□□ -0.16
HDAC9-208ENST00000417496 IMPDH2P12268 514 aa14.03□□□□□ -0.16
HDAC9-208ENST00000417496 COX7A2P14406 83 aa14.03□□□□□ -0.16
HDAC9-208ENST00000417496 PORP16435 677 aaPredicted RBP14.03□□□□□ -0.16
HDAC9-208ENST00000417496 SLC6A12P48065 614 aa14.03□□□□□ -0.16
HDAC9-208ENST00000417496 ARHGDIAP52565 204 aa14.03□□□□□ -0.16
HDAC9-208ENST00000417496 PFN3P60673 137 aa14.03□□□□□ -0.16
HDAC9-208ENST00000417496 OCA2Q04671 838 aa14.03□□□□□ -0.16
HDAC9-208ENST00000417496 DUOXA1Q1HG43 343 aa14.03□□□□□ -0.16
HDAC9-208ENST00000417496 TRIM16LQ309B1 348 aa14.03□□□□□ -0.16
HDAC9-208ENST00000417496 ZC3H12BQ5HYM0 836 aaKnown RBP14.03□□□□□ -0.16
HDAC9-208ENST00000417496 GAREM2Q75VX8 874 aa14.03□□□□□ -0.16
HDAC9-208ENST00000417496 HORMAD1Q86X24 394 aa14.03□□□□□ -0.16
HDAC9-208ENST00000417496 CBARPQ8N350 705 aaPredicted RBP14.03□□□□□ -0.16
HDAC9-208ENST00000417496 CD99L2Q8TCZ2 262 aa14.03□□□□□ -0.16
HDAC9-208ENST00000417496 RAET1EQ8TD07 263 aa14.03□□□□□ -0.16
HDAC9-208ENST00000417496 SH3KBP1Q96B97 665 aa14.03□□□□□ -0.16
HDAC9-208ENST00000417496 DUSP21Q9H596 190 aa14.03□□□□□ -0.16
HDAC9-208ENST00000417496 IL21Q9HBE4 155 aa14.03□□□□□ -0.16
HDAC9-208ENST00000417496 KIAA1522Q9P206 1035 aaPredicted RBP14.03□□□□□ -0.16
HDAC9-208ENST00000417496 SRRDQ9UH36 339 aa14.03□□□□□ -0.16
HDAC9-208ENST00000417496 DAPK2Q9UIK4 370 aa14.03□□□□□ -0.16
HDAC9-208ENST00000417496 MAGEB17A8MXT2 336 aa14.03□□□□□ -0.16
HDAC9-208ENST00000417496 OR56A5P0C7T3 313 aa14.03□□□□□ -0.16
HDAC9-208ENST00000417496 TNFRSF1BP20333 461 aa14.03□□□□□ -0.16
HDAC9-208ENST00000417496 GABRR2P28476 465 aa14.03□□□□□ -0.16
HDAC9-208ENST00000417496 RXRGP48443 463 aa14.03□□□□□ -0.16
HDAC9-208ENST00000417496 CRYBA2P53672 197 aa14.03□□□□□ -0.16
HDAC9-208ENST00000417496 CREMQ03060 361 aa14.03□□□□□ -0.16
HDAC9-208ENST00000417496 ABRQ12979 859 aa14.03□□□□□ -0.16
HDAC9-208ENST00000417496 CLCA4Q14CN2 919 aa14.03□□□□□ -0.16
HDAC9-208ENST00000417496 RFX4Q33E94 735 aa14.03□□□□□ -0.16
HDAC9-208ENST00000417496 CCSMST1Q4G0I0 132 aa14.03□□□□□ -0.16
HDAC9-208ENST00000417496 CAPN13Q6MZZ7 669 aaPredicted RBP14.03□□□□□ -0.16
HDAC9-208ENST00000417496 DPY19L3Q6ZPD9 716 aa14.03□□□□□ -0.16
HDAC9-208ENST00000417496 LRRC70Q7Z2Q7 622 aa14.03□□□□□ -0.16
HDAC9-208ENST00000417496 SERPINA11Q86U17 422 aa14.03□□□□□ -0.16
HDAC9-208ENST00000417496 GALNT13Q8IUC8 556 aa14.03□□□□□ -0.16
HDAC9-208ENST00000417496 LILRA3Q8N6C8 439 aaPredicted RBP14.03□□□□□ -0.16
HDAC9-208ENST00000417496 L3MBTL4Q8NA19 623 aa14.03□□□□□ -0.16
HDAC9-208ENST00000417496 CHST14Q8NCH0 376 aa14.03□□□□□ -0.16
HDAC9-208ENST00000417496 SUV39H2Q9H5I1 410 aa14.03□□□□□ -0.16
HDAC9-208ENST00000417496 KIF17Q9P2E2 1029 aa14.03□□□□□ -0.16
HDAC9-208ENST00000417496 M0QX08 132 aa14.02□□□□□ -0.16
HDAC9-208ENST00000417496 HOXA2O43364 376 aa14.02□□□□□ -0.16
HDAC9-208ENST00000417496 PCDHGA12O60330 932 aa14.02□□□□□ -0.16
HDAC9-208ENST00000417496 ADAM23O75077 832 aa14.02□□□□□ -0.16
HDAC9-208ENST00000417496 AOC2O75106 756 aa14.02□□□□□ -0.16
HDAC9-208ENST00000417496 GABARAPO95166 117 aa14.02□□□□□ -0.16
HDAC9-208ENST00000417496 ETHE1O95571 254 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms