RNA–Protein interactions for RNA: ENST00000415380.6

SCARB1-203, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2 BASIC

Gene SCARB1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-203ENST00000415380 CD40LGP29965 261 aa17.47■□□□□ 0.39
SCARB1-203ENST00000415380 TRPC1P48995 793 aa17.47■□□□□ 0.39
SCARB1-203ENST00000415380 HNRNPFP52597 415 aaKnown RBP17.47■□□□□ 0.39
SCARB1-203ENST00000415380 RPP38P78345 283 aaKnown RBP17.47■□□□□ 0.39
SCARB1-203ENST00000415380 SEMG2Q02383 582 aa17.47■□□□□ 0.39
SCARB1-203ENST00000415380 PROX2Q3B8N5 592 aa17.47■□□□□ 0.39
SCARB1-203ENST00000415380 PLEKHG6Q3KR16 790 aa17.47■□□□□ 0.39
SCARB1-203ENST00000415380 GPR33Q49SQ1 333 aa17.47■□□□□ 0.39
SCARB1-203ENST00000415380 LRRC70Q7Z2Q7 622 aa17.47■□□□□ 0.39
SCARB1-203ENST00000415380 RNF175Q8N4F7 328 aa17.47■□□□□ 0.39
SCARB1-203ENST00000415380 RHOXF1Q8NHV9 184 aa17.47■□□□□ 0.39
SCARB1-203ENST00000415380 BCL7CQ8WUZ0 217 aaPredicted RBP17.47■□□□□ 0.39
SCARB1-203ENST00000415380 APH1BQ8WW43 257 aa17.47■□□□□ 0.39
SCARB1-203ENST00000415380 ZHX1-C8orf76Q96EF9 292 aa17.47■□□□□ 0.39
SCARB1-203ENST00000415380 THUMPD1Q9NXG2 353 aaKnown RBP17.47■□□□□ 0.39
SCARB1-203ENST00000415380 SCHIP1Q9P0W5 487 aaPredicted RBP17.47■□□□□ 0.39
SCARB1-203ENST00000415380 TMED5Q9Y3A6 229 aa17.47■□□□□ 0.39
SCARB1-203ENST00000415380 FAM32AQ9Y421 112 aaKnown RBP17.47■□□□□ 0.39
SCARB1-203ENST00000415380 SCN8AQ9UQD0 1980 aa17.47■□□□□ 0.39
SCARB1-203ENST00000415380 CLDN24A6NM45 220 aa17.47■□□□□ 0.39
SCARB1-203ENST00000415380 EFCAB9A8MZ26 197 aa17.47■□□□□ 0.39
SCARB1-203ENST00000415380 CBSLP0DN79 551 aa17.47■□□□□ 0.39
SCARB1-203ENST00000415380 CCR7P32248 378 aa17.47■□□□□ 0.39
SCARB1-203ENST00000415380 CBSP35520 551 aa17.47■□□□□ 0.39
SCARB1-203ENST00000415380 NPRL3Q12980 569 aa17.47■□□□□ 0.39
SCARB1-203ENST00000415380 MTAPQ13126 283 aa17.47■□□□□ 0.39
SCARB1-203ENST00000415380 BOP1Q14137 746 aaKnown RBP17.47■□□□□ 0.39
SCARB1-203ENST00000415380 NOXRED1Q6NXP6 359 aa17.47■□□□□ 0.39
SCARB1-203ENST00000415380 ZNF621Q6ZSS3 439 aa17.47■□□□□ 0.39
SCARB1-203ENST00000415380 NEK10Q6ZWH5 1172 aa17.47■□□□□ 0.39
SCARB1-203ENST00000415380 UBE2R2Q712K3 238 aaPredicted RBP17.47■□□□□ 0.39
SCARB1-203ENST00000415380 CBLL1Q75N03 491 aa17.47■□□□□ 0.39
SCARB1-203ENST00000415380 EIF3MQ7L2H7 374 aaKnown RBP17.47■□□□□ 0.39
SCARB1-203ENST00000415380 TSPAN33Q86UF1 283 aa17.47■□□□□ 0.39
SCARB1-203ENST00000415380 IPCEF1Q8WWN9 437 aaPredicted RBP17.47■□□□□ 0.39
SCARB1-203ENST00000415380 ALG14Q96F25 216 aa17.47■□□□□ 0.39
SCARB1-203ENST00000415380 PITX2Q99697 317 aa17.47■□□□□ 0.39
SCARB1-203ENST00000415380 REEP1Q9H902 201 aa17.47■□□□□ 0.39
SCARB1-203ENST00000415380 ERVK-11Q9UQG0 969 aa17.47■□□□□ 0.39
SCARB1-203ENST00000415380 HTR3EA5X5Y0 456 aa17.46■□□□□ 0.39
SCARB1-203ENST00000415380 CST5P28325 142 aaPredicted RBP17.46■□□□□ 0.39
SCARB1-203ENST00000415380 PPP5CP53041 499 aa17.46■□□□□ 0.39
SCARB1-203ENST00000415380 ITGA1P56199 1179 aa17.46■□□□□ 0.39
SCARB1-203ENST00000415380 NEK5Q6P3R8 708 aa17.46■□□□□ 0.39
SCARB1-203ENST00000415380 FAHD1Q6P587 224 aa17.46■□□□□ 0.39
SCARB1-203ENST00000415380 ENTHD1Q8IYW4 607 aa17.46■□□□□ 0.39
SCARB1-203ENST00000415380 PCSK9Q8NBP7 692 aaKnown RBP17.46■□□□□ 0.39
SCARB1-203ENST00000415380 GPR26Q8NDV2 337 aa17.46■□□□□ 0.39
SCARB1-203ENST00000415380 MCFD2Q8NI22 146 aa17.46■□□□□ 0.39
SCARB1-203ENST00000415380 PSMA8Q8TAA3 256 aa17.46■□□□□ 0.39
SCARB1-203ENST00000415380 DACH2Q96NX9 599 aa17.46■□□□□ 0.39
SCARB1-203ENST00000415380 PCDHB7Q9Y5E2 793 aa17.46■□□□□ 0.39
SCARB1-203ENST00000415380 UPK3BL1B0FP48 263 aa17.46■□□□□ 0.39
SCARB1-203ENST00000415380 UPK3BL2E5RIL1 263 aa17.46■□□□□ 0.39
SCARB1-203ENST00000415380 EPN2O95208 641 aa17.46■□□□□ 0.39
SCARB1-203ENST00000415380 GPX2P18283 190 aa17.46■□□□□ 0.39
SCARB1-203ENST00000415380 NSG1P42857 185 aa17.46■□□□□ 0.39
SCARB1-203ENST00000415380 TUFMP49411 452 aaKnown RBP17.46■□□□□ 0.39
SCARB1-203ENST00000415380 WNT3P56703 355 aa17.46■□□□□ 0.39
SCARB1-203ENST00000415380 ELAVL2Q12926 359 aaKnown RBP17.46■□□□□ 0.39
SCARB1-203ENST00000415380 UGT8Q16880 541 aa17.46■□□□□ 0.39
SCARB1-203ENST00000415380 CDKL4Q5MAI5 379 aa17.46■□□□□ 0.39
SCARB1-203ENST00000415380 UBE2UQ5VVX9 321 aa17.46■□□□□ 0.39
SCARB1-203ENST00000415380 PDE12Q6L8Q7 609 aaKnown RBP17.46■□□□□ 0.39
SCARB1-203ENST00000415380 TPGS1Q6ZTW0 290 aa17.46■□□□□ 0.39
SCARB1-203ENST00000415380 APCDD1Q8J025 514 aa17.46■□□□□ 0.39
SCARB1-203ENST00000415380 L3MBTL4Q8NA19 623 aa17.46■□□□□ 0.39
SCARB1-203ENST00000415380 DNASE1L2Q92874 299 aa17.46■□□□□ 0.39
SCARB1-203ENST00000415380 ZNF106Q9H2Y7 1883 aaKnown RBP17.45■□□□□ 0.38
SCARB1-203ENST00000415380 MAGEB17A8MXT2 336 aa17.45■□□□□ 0.38
SCARB1-203ENST00000415380 PRAMEF4O60810 478 aa17.45■□□□□ 0.38
SCARB1-203ENST00000415380 OR1D2P34982 312 aa17.45■□□□□ 0.38
SCARB1-203ENST00000415380 PPP3CCP48454 512 aa17.45■□□□□ 0.38
SCARB1-203ENST00000415380 CAMK2GQ13555 558 aaPredicted RBP17.45■□□□□ 0.38
SCARB1-203ENST00000415380 SYT16Q17RD7 645 aa17.45■□□□□ 0.38
SCARB1-203ENST00000415380 PTCHD3Q3KNS1 767 aa17.45■□□□□ 0.38
SCARB1-203ENST00000415380 PRAMEF9Q5VWM5 478 aa17.45■□□□□ 0.38
SCARB1-203ENST00000415380 ERICH5Q6P6B1 374 aa17.45■□□□□ 0.38
SCARB1-203ENST00000415380 TTC23LQ6PF05 361 aa17.45■□□□□ 0.38
SCARB1-203ENST00000415380 ZSWIM9Q86XI8 627 aa17.45■□□□□ 0.38
SCARB1-203ENST00000415380 DCAF4L2Q8NA75 395 aa17.45■□□□□ 0.38
SCARB1-203ENST00000415380 ITPAQ9BY32 194 aa17.45■□□□□ 0.38
SCARB1-203ENST00000415380 DCSTAMPQ9H295 470 aa17.45■□□□□ 0.38
SCARB1-203ENST00000415380 GPC6Q9Y625 555 aaPredicted RBP17.45■□□□□ 0.38
SCARB1-203ENST00000415380 PIKFYVEQ9Y2I7 2098 aa17.45■□□□□ 0.38
SCARB1-203ENST00000415380 E9PQ18 207 aa17.45■□□□□ 0.38
SCARB1-203ENST00000415380 SCN2BO60939 215 aa17.45■□□□□ 0.38
SCARB1-203ENST00000415380 CPSF4O95639 269 aaKnown RBP17.45■□□□□ 0.38
SCARB1-203ENST00000415380 NTRK1P04629 796 aa17.45■□□□□ 0.38
SCARB1-203ENST00000415380 GALTP07902 379 aa17.45■□□□□ 0.38
SCARB1-203ENST00000415380 PRPS1L1P21108 318 aa17.45■□□□□ 0.38
SCARB1-203ENST00000415380 AOAHP28039 575 aa17.45■□□□□ 0.38
SCARB1-203ENST00000415380 HOXD12P35452 270 aa17.45■□□□□ 0.38
SCARB1-203ENST00000415380 LIPAP38571 399 aa17.45■□□□□ 0.38
SCARB1-203ENST00000415380 EIF2DP41214 584 aaKnown RBP17.45■□□□□ 0.38
SCARB1-203ENST00000415380 ALDH7A1P49419 539 aaKnown RBP17.45■□□□□ 0.38
SCARB1-203ENST00000415380 CDH18Q13634 790 aa17.45■□□□□ 0.38
SCARB1-203ENST00000415380 GPR155Q7Z3F1 870 aa17.45■□□□□ 0.38
SCARB1-203ENST00000415380 SYT12Q8IV01 421 aa17.45■□□□□ 0.38
SCARB1-203ENST00000415380 CLECL1Q8IZS7 167 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms