RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 POLEQ07864 2286 aa18.39■□□□□ 0.54
UBXN4-202ENST00000415164 PRPF4O43172 522 aaKnown RBP eCLIP18.39■□□□□ 0.53
UBXN4-202ENST00000415164 UNC5CO95185 931 aa18.39■□□□□ 0.53
UBXN4-202ENST00000415164 SNRPB2P08579 225 aaKnown RBP18.39■□□□□ 0.53
UBXN4-202ENST00000415164 ZSCAN5DPP0CG00 497 aa18.39■□□□□ 0.53
UBXN4-202ENST00000415164 ELAVL4P26378 380 aaKnown RBP18.39■□□□□ 0.53
UBXN4-202ENST00000415164 TNFSF10P50591 281 aa18.39■□□□□ 0.53
UBXN4-202ENST00000415164 ZNF75DP51815 510 aa18.39■□□□□ 0.53
UBXN4-202ENST00000415164 OASLQ15646 514 aaKnown RBP18.39■□□□□ 0.53
UBXN4-202ENST00000415164 HKDC1Q2TB90 917 aa18.39■□□□□ 0.53
UBXN4-202ENST00000415164 ATG9BQ674R7 924 aa18.39■□□□□ 0.53
UBXN4-202ENST00000415164 ADCK2Q7Z695 626 aa18.39■□□□□ 0.53
UBXN4-202ENST00000415164 CSNK1A1LQ8N752 337 aa18.39■□□□□ 0.53
UBXN4-202ENST00000415164 SUN3Q8TAQ9 357 aa18.39■□□□□ 0.53
UBXN4-202ENST00000415164 NR4A3Q92570 626 aa18.39■□□□□ 0.53
UBXN4-202ENST00000415164 TAAR6Q96RI8 345 aa18.39■□□□□ 0.53
UBXN4-202ENST00000415164 SPATA7Q9P0W8 599 aa18.39■□□□□ 0.53
UBXN4-202ENST00000415164 MRPS2Q9Y399 296 aaKnown RBP18.39■□□□□ 0.53
UBXN4-202ENST00000415164 A0A1W2PPV9 198 aa18.38■□□□□ 0.53
UBXN4-202ENST00000415164 GOLGA8KD6RF30 607 aa18.38■□□□□ 0.53
UBXN4-202ENST00000415164 GOLGA8TH3BQL2 631 aa18.38■□□□□ 0.53
UBXN4-202ENST00000415164 NIPSNAP2O75323 286 aa18.38■□□□□ 0.53
UBXN4-202ENST00000415164 SERPINA7P05543 415 aa18.38■□□□□ 0.53
UBXN4-202ENST00000415164 NMBRP28336 390 aa18.38■□□□□ 0.53
UBXN4-202ENST00000415164 GRNP28799 593 aaKnown RBP18.38■□□□□ 0.53
UBXN4-202ENST00000415164 TERF1P54274 439 aa18.38■□□□□ 0.53
UBXN4-202ENST00000415164 BASP1P80723 227 aaKnown RBP18.38■□□□□ 0.53
UBXN4-202ENST00000415164 CTSL3PQ5NE16 218 aa18.38■□□□□ 0.53
UBXN4-202ENST00000415164 MFSD4BQ5TF39 518 aa18.38■□□□□ 0.53
UBXN4-202ENST00000415164 FBXO42Q6P3S6 717 aa18.38■□□□□ 0.53
UBXN4-202ENST00000415164 CES3Q6UWW8 571 aa18.38■□□□□ 0.53
UBXN4-202ENST00000415164 LRRC6Q86X45 466 aa18.38■□□□□ 0.53
UBXN4-202ENST00000415164 RERGQ96A58 199 aaPredicted RBP18.38■□□□□ 0.53
UBXN4-202ENST00000415164 RIC8BQ9NVN3 520 aa18.38■□□□□ 0.53
UBXN4-202ENST00000415164 PAK5Q9P286 719 aa18.38■□□□□ 0.53
UBXN4-202ENST00000415164 RUVBL1Q9Y265 456 aaKnown RBP18.38■□□□□ 0.53
UBXN4-202ENST00000415164 SVILO95425 2214 aa18.38■□□□□ 0.53
UBXN4-202ENST00000415164 IGHV1-45A0A0A0MS14 117 aa18.37■□□□□ 0.53
UBXN4-202ENST00000415164 OR2A25A4D2G3 310 aa18.37■□□□□ 0.53
UBXN4-202ENST00000415164 CCL21O00585 134 aa18.37■□□□□ 0.53
UBXN4-202ENST00000415164 PCDH17O14917 1159 aa18.37■□□□□ 0.53
UBXN4-202ENST00000415164 RASAL1O95294 804 aa18.37■□□□□ 0.53
UBXN4-202ENST00000415164 BMP10O95393 424 aa18.37■□□□□ 0.53
UBXN4-202ENST00000415164 WDPCPO95876 746 aa18.37■□□□□ 0.53
UBXN4-202ENST00000415164 ITGAMP11215 1152 aa18.37■□□□□ 0.53
UBXN4-202ENST00000415164 CHRM3P20309 590 aa18.37■□□□□ 0.53
UBXN4-202ENST00000415164 FDXRP22570 491 aa18.37■□□□□ 0.53
UBXN4-202ENST00000415164 SOX11P35716 441 aa18.37■□□□□ 0.53
UBXN4-202ENST00000415164 TDGF1P3P51864 188 aa18.37■□□□□ 0.53
UBXN4-202ENST00000415164 DSG2Q14126 1118 aa18.37■□□□□ 0.53
UBXN4-202ENST00000415164 NAA25Q14CX7 972 aa18.37■□□□□ 0.53
UBXN4-202ENST00000415164 SYT16Q17RD7 645 aa18.37■□□□□ 0.53
UBXN4-202ENST00000415164 ANKRD20A4Q4UJ75 823 aa18.37■□□□□ 0.53
UBXN4-202ENST00000415164 HIBCHQ6NVY1 386 aaPredicted RBP18.37■□□□□ 0.53
UBXN4-202ENST00000415164 TMEM207Q6UWW9 146 aa18.37■□□□□ 0.53
UBXN4-202ENST00000415164 SDCCAG8Q86SQ7 713 aaPredicted RBP18.37■□□□□ 0.53
UBXN4-202ENST00000415164 TXLNBQ8N3L3 684 aa18.37■□□□□ 0.53
UBXN4-202ENST00000415164 AMER2Q8N7J2 671 aa18.37■□□□□ 0.53
UBXN4-202ENST00000415164 OR9A1PQ8NGU1 263 aa18.37■□□□□ 0.53
UBXN4-202ENST00000415164 HMGCLL1Q8TB92 370 aa18.37■□□□□ 0.53
UBXN4-202ENST00000415164 PSMF1Q92530 271 aa18.37■□□□□ 0.53
UBXN4-202ENST00000415164 PEX13Q92968 403 aa18.37■□□□□ 0.53
UBXN4-202ENST00000415164 HES6Q96HZ4 224 aa18.37■□□□□ 0.53
UBXN4-202ENST00000415164 BAG1Q99933 345 aaPredicted RBP18.37■□□□□ 0.53
UBXN4-202ENST00000415164 TRIM56Q9BRZ2 755 aaKnown RBP18.37■□□□□ 0.53
UBXN4-202ENST00000415164 C14orf105Q9NVL8 296 aa18.37■□□□□ 0.53
UBXN4-202ENST00000415164 TAC3Q9UHF0 121 aa18.37■□□□□ 0.53
UBXN4-202ENST00000415164 CAPN6Q9Y6Q1 641 aa18.37■□□□□ 0.53
UBXN4-202ENST00000415164 ABCA12Q86UK0 2595 aa18.37■□□□□ 0.53
UBXN4-202ENST00000415164 CNTRLQ7Z7A1 2325 aa18.37■□□□□ 0.53
UBXN4-202ENST00000415164 A0A0A6YYC8 382 aaPredicted RBP18.36■□□□□ 0.53
UBXN4-202ENST00000415164 I3L1I5 382 aaPredicted RBP18.36■□□□□ 0.53
UBXN4-202ENST00000415164 STATHP02808 62 aa18.36■□□□□ 0.53
UBXN4-202ENST00000415164 RPS3P23396 243 aaKnown RBP eCLIP18.36■□□□□ 0.53
UBXN4-202ENST00000415164 MAT1AQ00266 395 aaKnown RBP18.36■□□□□ 0.53
UBXN4-202ENST00000415164 ZNF33BQ06732 778 aa18.36■□□□□ 0.53
UBXN4-202ENST00000415164 INAQ16352 499 aa18.36■□□□□ 0.53
UBXN4-202ENST00000415164 PRTGQ2VWP7 1150 aa18.36■□□□□ 0.53
UBXN4-202ENST00000415164 ABHD17BQ5VST6 288 aa18.36■□□□□ 0.53
UBXN4-202ENST00000415164 LRRC8BQ6P9F7 803 aa18.36■□□□□ 0.53
UBXN4-202ENST00000415164 PPFIBP2Q8ND30 876 aa18.36■□□□□ 0.53
UBXN4-202ENST00000415164 SMPDL3AQ92484 453 aa18.36■□□□□ 0.53
UBXN4-202ENST00000415164 HAS2Q92819 552 aa18.36■□□□□ 0.53
UBXN4-202ENST00000415164 RELTQ969Z4 430 aa18.36■□□□□ 0.53
UBXN4-202ENST00000415164 PLCD4Q9BRC7 762 aa18.36■□□□□ 0.53
UBXN4-202ENST00000415164 FRMD8P1Q9BZ68 369 aaPredicted RBP18.36■□□□□ 0.53
UBXN4-202ENST00000415164 ENAMQ9NRM1 1142 aa18.36■□□□□ 0.53
UBXN4-202ENST00000415164 BFARQ9NZS9 450 aa18.36■□□□□ 0.53
UBXN4-202ENST00000415164 SEC14L3Q9UDX4 400 aa18.36■□□□□ 0.53
UBXN4-202ENST00000415164 PCYOX1Q9UHG3 505 aa18.36■□□□□ 0.53
UBXN4-202ENST00000415164 MKL2Q9ULH7 1088 aa18.36■□□□□ 0.53
UBXN4-202ENST00000415164 CRYL1Q9Y2S2 319 aa18.36■□□□□ 0.53
UBXN4-202ENST00000415164 KLK4Q9Y5K2 254 aa18.36■□□□□ 0.53
UBXN4-202ENST00000415164 IGLV3-12A0A075B6K2 115 aa18.35■□□□□ 0.53
UBXN4-202ENST00000415164 A8MUI8 341 aa18.35■□□□□ 0.53
UBXN4-202ENST00000415164 E5RI56 91 aa18.35■□□□□ 0.53
UBXN4-202ENST00000415164 PFDN6O15212 129 aa18.35■□□□□ 0.53
UBXN4-202ENST00000415164 VAPBO95292 243 aa18.35■□□□□ 0.53
UBXN4-202ENST00000415164 SYF2O95926 243 aaKnown RBP18.35■□□□□ 0.53
UBXN4-202ENST00000415164 MGAT1P26572 445 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms