RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 MKI67P46013 3256 aaKnown RBP4.18□□□□□ -1.74
CLK1-203ENST00000409769 IGHV4OR15-8A0A075B7B6 117 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 A0A087X0M5 115 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 A0A1B0GX30 115 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 EIF3CLB5ME19 914 aaKnown RBP4.18□□□□□ -1.74
CLK1-203ENST00000409769 ZNF587BE7ETH6 402 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 EPHB6O15197 1021 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 N4BP1O75113 896 aaKnown RBP4.18□□□□□ -1.74
CLK1-203ENST00000409769 GYPCP04921 128 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 TPM3P06753 285 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 TPM2P07951 284 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 CLTBP09497 229 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 G6PDP11413 515 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 KRT13P13646 458 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 KCNE1P15382 129 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 MCM3P25205 808 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 PON1P27169 355 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 GCLMP48507 274 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 KLK7P49862 253 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 AP3M2P53677 418 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 OSTNP61366 133 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 ZBED6P86452 979 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 MYL7Q01449 175 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 NCBP1Q09161 790 aaKnown RBP4.18□□□□□ -1.74
CLK1-203ENST00000409769 GRIK2Q13002 908 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 SYCP1Q15431 976 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 NAB2Q15742 525 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 CCDC6Q16204 474 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 CTF1Q16619 201 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 COL28A1Q2UY09 1125 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 EIF2S3LQ2VIR3 472 aaKnown RBP4.18□□□□□ -1.74
CLK1-203ENST00000409769 PAPPA-AS1Q5QFB9 102 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 SPECC1LQ69YQ0 1117 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 KRT39Q6A163 491 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 TRNP1Q6NT89 227 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 TRIM65Q6PJ69 517 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 TUBA1AQ71U36 451 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 DPPA4Q7L190 304 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 HAPLN4Q86UW8 402 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 EXOC3L1Q86VI1 746 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 CREBRFQ8IUR6 639 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 CD302Q8IX05 232 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 TMEM116Q8NCL8 245 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 OR5B17Q8NGF7 314 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 SEMA4DQ92854 862 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 APBB2Q92870 758 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 CCDC127Q96BQ5 260 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 MMABQ96EY8 250 aaPredicted RBP4.18□□□□□ -1.74
CLK1-203ENST00000409769 HARBI1Q96MB7 349 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 IL17FQ96PD4 163 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 TSPAN18Q96SJ8 248 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 PKP4Q99569 1192 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 TUBA1CQ9BQE3 449 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 ADPGKQ9BRR6 497 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 TCHPQ9BT92 498 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 CCDC94Q9BW85 323 aaPredicted RBP4.18□□□□□ -1.74
CLK1-203ENST00000409769 FTHL17Q9BXU8 183 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 CXCL16Q9H2A7 254 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 GANQ9H2C0 597 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 NXF3Q9H4D5 531 aaKnown RBP4.18□□□□□ -1.74
CLK1-203ENST00000409769 RPF1Q9H9Y2 349 aaKnown RBP4.18□□□□□ -1.74
CLK1-203ENST00000409769 KIF9Q9HAQ2 790 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 FBRSL1Q9HCM7 1045 aaKnown RBP4.18□□□□□ -1.74
CLK1-203ENST00000409769 RGS18Q9NS28 235 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 UBA2Q9UBT2 640 aaPredicted RBP4.18□□□□□ -1.74
CLK1-203ENST00000409769 FBXL5Q9UKA1 691 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 MKLN1Q9UL63 735 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 C2CD2Q9Y426 696 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 HES2Q9Y543 173 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 VWA8A3KMH1 1905 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 KIAA1671Q9BY89 1806 aa4.18□□□□□ -1.74
CLK1-203ENST00000409769 SAA2-SAA4A0A096LPE2 208 aa4.17□□□□□ -1.74
CLK1-203ENST00000409769 BMPR1BO00238 502 aa4.17□□□□□ -1.74
CLK1-203ENST00000409769 TULP2O00295 520 aa4.17□□□□□ -1.74
CLK1-203ENST00000409769 PTGESO14684 152 aa4.17□□□□□ -1.74
CLK1-203ENST00000409769 STX10O60499 249 aa4.17□□□□□ -1.74
CLK1-203ENST00000409769 DAB1O75553 588 aa4.17□□□□□ -1.74
CLK1-203ENST00000409769 TBX18O95935 607 aa4.17□□□□□ -1.74
CLK1-203ENST00000409769 ASS1P00966 412 aaKnown RBP4.17□□□□□ -1.74
CLK1-203ENST00000409769 TIMP1P01033 207 aa4.17□□□□□ -1.74
CLK1-203ENST00000409769 IGLV2-11P01706 119 aa4.17□□□□□ -1.74
CLK1-203ENST00000409769 SP1P08047 785 aa4.17□□□□□ -1.74
CLK1-203ENST00000409769 DLATP10515 647 aaKnown RBP4.17□□□□□ -1.74
CLK1-203ENST00000409769 ACTN1P12814 892 aa4.17□□□□□ -1.74
CLK1-203ENST00000409769 UCHL3P15374 230 aa4.17□□□□□ -1.74
CLK1-203ENST00000409769 CYP3A5P20815 502 aa4.17□□□□□ -1.74
CLK1-203ENST00000409769 S1PR1P21453 382 aa4.17□□□□□ -1.74
CLK1-203ENST00000409769 CHMP24386 653 aa4.17□□□□□ -1.74
CLK1-203ENST00000409769 CASP14P31944 242 aa4.17□□□□□ -1.74
CLK1-203ENST00000409769 RFC2P35250 354 aa4.17□□□□□ -1.74
CLK1-203ENST00000409769 MATR3P43243 847 aaKnown RBP eCLIP4.17□□□□□ -1.74
CLK1-203ENST00000409769 CSNK2A1P68400 391 aaPredicted RBP4.17□□□□□ -1.74
CLK1-203ENST00000409769 NIPAL4Q0D2K0 466 aa4.17□□□□□ -1.74
CLK1-203ENST00000409769 TBCEQ15813 527 aaPredicted RBP4.17□□□□□ -1.74
CLK1-203ENST00000409769 ADIPOQQ15848 244 aa4.17□□□□□ -1.74
CLK1-203ENST00000409769 DECR1Q16698 335 aa4.17□□□□□ -1.74
CLK1-203ENST00000409769 EXOC3L4Q17RC7 722 aa4.17□□□□□ -1.74
CLK1-203ENST00000409769 MRGPRG-AS1Q2M3A8 158 aa4.17□□□□□ -1.74
CLK1-203ENST00000409769 HIST2H2BCQ6DN03 193 aa4.17□□□□□ -1.74
CLK1-203ENST00000409769 HIST2H2BDQ6DRA6 164 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms