RNA–Protein interactions for RNA: ENST00000397885.2

PUM3-202, Transcript of pumilio RNA binding family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUM3, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-202ENST00000397885 SYNDIG1Q9H7V2 258 aa11.19□□□□□ -0.62
PUM3-202ENST00000397885 GIMAP2Q9UG22 337 aa11.19□□□□□ -0.62
PUM3-202ENST00000397885 PHF11Q9UIL8 331 aa11.19□□□□□ -0.62
PUM3-202ENST00000397885 FZD10Q9ULW2 581 aa11.19□□□□□ -0.62
PUM3-202ENST00000397885 ING4Q9UNL4 249 aa11.19□□□□□ -0.62
PUM3-202ENST00000397885 FNDC1Q4ZHG4 1894 aaPredicted RBP11.19□□□□□ -0.62
PUM3-202ENST00000397885 MYO18AQ92614 2054 aaKnown RBP11.19□□□□□ -0.62
PUM3-202ENST00000397885 ELOVL7A1L3X0 281 aa11.19□□□□□ -0.62
PUM3-202ENST00000397885 CLCA1A8K7I4 914 aa11.19□□□□□ -0.62
PUM3-202ENST00000397885 SLC43A1O75387 559 aa11.19□□□□□ -0.62
PUM3-202ENST00000397885 TNFRSF21O75509 655 aa11.19□□□□□ -0.62
PUM3-202ENST00000397885 WDR47O94967 919 aa11.19□□□□□ -0.62
PUM3-202ENST00000397885 RPS3P23396 243 aaKnown RBP eCLIP11.19□□□□□ -0.62
PUM3-202ENST00000397885 DAPP51397 102 aa11.19□□□□□ -0.62
PUM3-202ENST00000397885 RORCP51449 518 aa11.19□□□□□ -0.62
PUM3-202ENST00000397885 ERVK-8P63133 956 aa11.19□□□□□ -0.62
PUM3-202ENST00000397885 GNASQ5JWF2 1037 aa11.19□□□□□ -0.62
PUM3-202ENST00000397885 EEF1DP3Q658K8 133 aa11.19□□□□□ -0.62
PUM3-202ENST00000397885 PAMR1Q6UXH9 720 aa11.19□□□□□ -0.62
PUM3-202ENST00000397885 TFAP2EQ6VUC0 442 aa11.19□□□□□ -0.62
PUM3-202ENST00000397885 DET1Q7L5Y6 550 aa11.19□□□□□ -0.62
PUM3-202ENST00000397885 SNX20Q7Z614 316 aa11.19□□□□□ -0.62
PUM3-202ENST00000397885 GALNT5Q7Z7M9 940 aa11.19□□□□□ -0.62
PUM3-202ENST00000397885 STX19Q8N4C7 294 aa11.19□□□□□ -0.62
PUM3-202ENST00000397885 FANK1Q8TC84 345 aa11.19□□□□□ -0.62
PUM3-202ENST00000397885 GPR151Q8TDV0 419 aa11.19□□□□□ -0.62
PUM3-202ENST00000397885 APH1BQ8WW43 257 aa11.19□□□□□ -0.62
PUM3-202ENST00000397885 SMG7Q92540 1137 aaKnown RBP11.19□□□□□ -0.62
PUM3-202ENST00000397885 DNASE1L2Q92874 299 aa11.19□□□□□ -0.62
PUM3-202ENST00000397885 RBPMSQ93062 196 aaKnown RBP11.19□□□□□ -0.62
PUM3-202ENST00000397885 FAM162AQ96A26 154 aa11.19□□□□□ -0.62
PUM3-202ENST00000397885 SGTBQ96EQ0 304 aa11.19□□□□□ -0.62
PUM3-202ENST00000397885 AHCYL2Q96HN2 611 aaKnown RBP11.19□□□□□ -0.62
PUM3-202ENST00000397885 ITCHQ96J02 903 aa11.19□□□□□ -0.62
PUM3-202ENST00000397885 SHARPINQ9H0F6 387 aa11.19□□□□□ -0.62
PUM3-202ENST00000397885 TNKS2Q9H2K2 1166 aa11.19□□□□□ -0.62
PUM3-202ENST00000397885 ASB7Q9H672 318 aa11.19□□□□□ -0.62
PUM3-202ENST00000397885 RNF167Q9H6Y7 350 aa11.19□□□□□ -0.62
PUM3-202ENST00000397885 PRMT7Q9NVM4 692 aaPredicted RBP11.19□□□□□ -0.62
PUM3-202ENST00000397885 CUEDC1Q9NWM3 386 aaPredicted RBP11.19□□□□□ -0.62
PUM3-202ENST00000397885 SPASTQ9UBP0 616 aa11.19□□□□□ -0.62
PUM3-202ENST00000397885 TNPO3Q9Y5L0 923 aaKnown RBP11.19□□□□□ -0.62
PUM3-202ENST00000397885 CENPFP49454 3210 aa11.18□□□□□ -0.62
PUM3-202ENST00000397885 SLC12A8A0AV02 714 aa11.18□□□□□ -0.62
PUM3-202ENST00000397885 WASHC1A8K0Z3 465 aa11.18□□□□□ -0.62
PUM3-202ENST00000397885 LACTBL1A8MY62 500 aa11.18□□□□□ -0.62
PUM3-202ENST00000397885 CXCR6O00574 342 aa11.18□□□□□ -0.62
PUM3-202ENST00000397885 KHNYNO15037 678 aaKnown RBP11.18□□□□□ -0.62
PUM3-202ENST00000397885 ZBTB24O43167 697 aaPredicted RBP11.18□□□□□ -0.62
PUM3-202ENST00000397885 B4GALT5O43286 388 aa11.18□□□□□ -0.62
PUM3-202ENST00000397885 PCDHGA12O60330 932 aa11.18□□□□□ -0.62
PUM3-202ENST00000397885 ACSL4O60488 711 aa11.18□□□□□ -0.62
PUM3-202ENST00000397885 WISP3O95389 354 aaPredicted RBP11.18□□□□□ -0.62
PUM3-202ENST00000397885 SNAI1O95863 264 aaPredicted RBP11.18□□□□□ -0.62
PUM3-202ENST00000397885 HLA-DQB1P01920 261 aa11.18□□□□□ -0.62
PUM3-202ENST00000397885 CSF3P09919 207 aa11.18□□□□□ -0.62
PUM3-202ENST00000397885 LINC00032P0C843 101 aa11.18□□□□□ -0.62
PUM3-202ENST00000397885 STAG3L1P0CL83 205 aa11.18□□□□□ -0.62
PUM3-202ENST00000397885 BMP8BP34820 402 aa11.18□□□□□ -0.62
PUM3-202ENST00000397885 MTPNP58546 118 aa11.18□□□□□ -0.62
PUM3-202ENST00000397885 ERVK-21P61565 698 aa11.18□□□□□ -0.62
PUM3-202ENST00000397885 FLI1Q01543 452 aaPredicted RBP11.18□□□□□ -0.62
PUM3-202ENST00000397885 GOLGA7BQ2TAP0 167 aa11.18□□□□□ -0.62
PUM3-202ENST00000397885 ATP6AP1LQ52LC2 224 aa11.18□□□□□ -0.62
PUM3-202ENST00000397885 XKR7Q5GH72 579 aa11.18□□□□□ -0.62
PUM3-202ENST00000397885 INTS6LQ5JSJ4 861 aaKnown RBP11.18□□□□□ -0.62
PUM3-202ENST00000397885 SAXO2Q658L1 398 aa11.18□□□□□ -0.62
PUM3-202ENST00000397885 MZT2BQ6NZ67 158 aa11.18□□□□□ -0.62
PUM3-202ENST00000397885 RNF180Q86T96 592 aa11.18□□□□□ -0.62
PUM3-202ENST00000397885 ISCA2Q86U28 154 aa11.18□□□□□ -0.62
PUM3-202ENST00000397885 RNF135Q8IUD6 432 aa11.18□□□□□ -0.62
PUM3-202ENST00000397885 RNF139Q8WU17 664 aa11.18□□□□□ -0.62
PUM3-202ENST00000397885 SORCS2Q96PQ0 1159 aa11.18□□□□□ -0.62
PUM3-202ENST00000397885 PELOQ9BRX2 385 aaKnown RBP11.18□□□□□ -0.62
PUM3-202ENST00000397885 ABHD16BQ9H3Z7 469 aa11.18□□□□□ -0.62
PUM3-202ENST00000397885 PIGUQ9H490 435 aa11.18□□□□□ -0.62
PUM3-202ENST00000397885 CMAHPQ9Y471 501 aa11.18□□□□□ -0.62
PUM3-202ENST00000397885 PTGDR2Q9Y5Y4 395 aa11.18□□□□□ -0.62
PUM3-202ENST00000397885 CIB4A0PJX0 185 aa11.18□□□□□ -0.62
PUM3-202ENST00000397885 ASB14A6NK59 587 aa11.18□□□□□ -0.62
PUM3-202ENST00000397885 KCNK1O00180 336 aa11.18□□□□□ -0.62
PUM3-202ENST00000397885 PPP6CO00743 305 aa11.18□□□□□ -0.62
PUM3-202ENST00000397885 HRO43593 1189 aa11.18□□□□□ -0.62
PUM3-202ENST00000397885 HCN1O60741 890 aa11.18□□□□□ -0.62
PUM3-202ENST00000397885 TPH1P17752 444 aa11.18□□□□□ -0.62
PUM3-202ENST00000397885 EDNRBP24530 442 aa11.18□□□□□ -0.62
PUM3-202ENST00000397885 HOXA1P49639 335 aaPredicted RBP11.18□□□□□ -0.62
PUM3-202ENST00000397885 KCNQ1P51787 676 aa11.18□□□□□ -0.62
PUM3-202ENST00000397885 RAB14P61106 215 aa11.18□□□□□ -0.62
PUM3-202ENST00000397885 MBTD1Q05BQ5 628 aa11.18□□□□□ -0.62
PUM3-202ENST00000397885 RUNX1T1Q06455 604 aa11.18□□□□□ -0.62
PUM3-202ENST00000397885 TMEM132DQ14C87 1099 aa11.18□□□□□ -0.62
PUM3-202ENST00000397885 PKDCCQ504Y2 493 aa11.18□□□□□ -0.62
PUM3-202ENST00000397885 ZMAT1Q5H9K5 638 aa11.18□□□□□ -0.62
PUM3-202ENST00000397885 PDZK1Q5T2W1 519 aa11.18□□□□□ -0.62
PUM3-202ENST00000397885 LCN1P1Q5VSP4 162 aa11.18□□□□□ -0.62
PUM3-202ENST00000397885 KIAA0930Q6ICG6 404 aaPredicted RBP11.18□□□□□ -0.62
PUM3-202ENST00000397885 RETSATQ6NUM9 610 aa11.18□□□□□ -0.62
PUM3-202ENST00000397885 PLPPR4Q7Z2D5 763 aa11.18□□□□□ -0.62
PUM3-202ENST00000397885 BMP8AQ7Z5Y6 402 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms