RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 DCAKDQ8WVC6 231 aa12.05□□□□□ -0.48
SMU1-201ENST00000397149 COL21A1Q96P44 957 aa12.05□□□□□ -0.48
SMU1-201ENST00000397149 CMKLR1Q99788 373 aa12.05□□□□□ -0.48
SMU1-201ENST00000397149 RBCK1Q9BYM8 510 aa12.05□□□□□ -0.48
SMU1-201ENST00000397149 RETREG1Q9H6L5 497 aa12.05□□□□□ -0.48
SMU1-201ENST00000397149 TNFRSF10DQ9UBN6 386 aa12.05□□□□□ -0.48
SMU1-201ENST00000397149 HCN2Q9UL51 889 aa12.05□□□□□ -0.48
SMU1-201ENST00000397149 CXCR6O00574 342 aa12.05□□□□□ -0.48
SMU1-201ENST00000397149 SNX3O60493 162 aa12.05□□□□□ -0.48
SMU1-201ENST00000397149 SERPINA7P05543 415 aa12.05□□□□□ -0.48
SMU1-201ENST00000397149 C8orf89P0DMQ9 161 aa12.05□□□□□ -0.48
SMU1-201ENST00000397149 CD36P16671 472 aa12.05□□□□□ -0.48
SMU1-201ENST00000397149 EPHA1P21709 976 aa12.05□□□□□ -0.48
SMU1-201ENST00000397149 ABRAXAS2Q15018 415 aa12.05□□□□□ -0.48
SMU1-201ENST00000397149 ASTE1Q2TB18 679 aaPredicted RBP12.05□□□□□ -0.48
SMU1-201ENST00000397149 SLC35F1Q5T1Q4 408 aa12.05□□□□□ -0.48
SMU1-201ENST00000397149 ABHD13Q7L211 337 aa12.05□□□□□ -0.48
SMU1-201ENST00000397149 OR2AG1Q9H205 316 aa12.05□□□□□ -0.48
SMU1-201ENST00000397149 SAV1Q9H4B6 383 aaPredicted RBP12.05□□□□□ -0.48
SMU1-201ENST00000397149 GRHPRQ9UBQ7 328 aa12.05□□□□□ -0.48
SMU1-201ENST00000397149 TMPRSS11EQ9UL52 423 aa12.05□□□□□ -0.48
SMU1-201ENST00000397149 ANKRD33BA6NCL7 494 aa12.05□□□□□ -0.48
SMU1-201ENST00000397149 C2orf72A6NCS6 295 aa12.05□□□□□ -0.48
SMU1-201ENST00000397149 PRNPP04156 253 aa12.05□□□□□ -0.48
SMU1-201ENST00000397149 CD97P48960 835 aa12.05□□□□□ -0.48
SMU1-201ENST00000397149 DSC2Q02487 901 aa12.05□□□□□ -0.48
SMU1-201ENST00000397149 SRYQ05066 204 aa12.05□□□□□ -0.48
SMU1-201ENST00000397149 ANKDD1AQ495B1 522 aa12.05□□□□□ -0.48
SMU1-201ENST00000397149 MCATQ8IVS2 390 aaKnown RBP12.05□□□□□ -0.48
SMU1-201ENST00000397149 VCPIP1Q96JH7 1222 aa12.05□□□□□ -0.48
SMU1-201ENST00000397149 EPYCQ99645 322 aa12.05□□□□□ -0.48
SMU1-201ENST00000397149 SORCS3Q9UPU3 1222 aa12.05□□□□□ -0.48
SMU1-201ENST00000397149 DNMT3AQ9Y6K1 912 aaPredicted RBP12.05□□□□□ -0.48
SMU1-201ENST00000397149 PZPP20742 1482 aa12.05□□□□□ -0.48
SMU1-201ENST00000397149 ATP7AQ04656 1500 aa12.05□□□□□ -0.48
SMU1-201ENST00000397149 AGPSO00116 658 aa12.05□□□□□ -0.48
SMU1-201ENST00000397149 MRPL49Q13405 166 aaKnown RBP12.05□□□□□ -0.48
SMU1-201ENST00000397149 LRRC58Q96CX6 371 aa12.05□□□□□ -0.48
SMU1-201ENST00000397149 MSANTD3Q96H12 275 aa12.05□□□□□ -0.48
SMU1-201ENST00000397149 RNF38Q9H0F5 515 aa12.05□□□□□ -0.48
SMU1-201ENST00000397149 DNTTIP1Q9H147 329 aa12.05□□□□□ -0.48
SMU1-201ENST00000397149 S100A14Q9HCY8 104 aa12.05□□□□□ -0.48
SMU1-201ENST00000397149 PCDHGA2Q9Y5H1 932 aa12.05□□□□□ -0.48
SMU1-201ENST00000397149 BBIP1A8MTZ0 92 aa12.05□□□□□ -0.48
SMU1-201ENST00000397149 ACOX3O15254 700 aa12.05□□□□□ -0.48
SMU1-201ENST00000397149 FRMPD4Q14CM0 1322 aa12.05□□□□□ -0.48
SMU1-201ENST00000397149 TSTD1Q8NFU3 115 aa12.05□□□□□ -0.48
SMU1-201ENST00000397149 OR7G1Q8NGA0 311 aa12.05□□□□□ -0.48
SMU1-201ENST00000397149 ATG5Q9H1Y0 275 aa12.05□□□□□ -0.48
SMU1-201ENST00000397149 LRFN1Q9P244 771 aa12.05□□□□□ -0.48
SMU1-201ENST00000397149 MYOCOSA0A1B0GUC4 107 aa12.04□□□□□ -0.48
SMU1-201ENST00000397149 RBM47A0AV96 593 aaKnown RBP12.04□□□□□ -0.48
SMU1-201ENST00000397149 CENPBD1B2RD01 187 aa12.04□□□□□ -0.48
SMU1-201ENST00000397149 LCN1P31025 176 aa12.04□□□□□ -0.48
SMU1-201ENST00000397149 ADAM15Q13444 863 aa12.04□□□□□ -0.48
SMU1-201ENST00000397149 SCARB2Q14108 478 aa12.04□□□□□ -0.48
SMU1-201ENST00000397149 SERPINA9Q86WD7 417 aa12.04□□□□□ -0.48
SMU1-201ENST00000397149 AZIN2Q96A70 460 aa12.04□□□□□ -0.48
SMU1-201ENST00000397149 ZBED6CLQ96FA7 236 aaPredicted RBP12.04□□□□□ -0.48
SMU1-201ENST00000397149 PURBQ96QR8 312 aaKnown RBP12.04□□□□□ -0.48
SMU1-201ENST00000397149 ZNF395Q9H8N7 513 aaPredicted RBP12.04□□□□□ -0.48
SMU1-201ENST00000397149 PTBP2Q9UKA9 531 aaKnown RBP12.04□□□□□ -0.48
SMU1-201ENST00000397149 DDTLA6NHG4 134 aaPredicted RBP12.04□□□□□ -0.48
SMU1-201ENST00000397149 PPA1Q15181 289 aa12.04□□□□□ -0.48
SMU1-201ENST00000397149 ZNF619Q8N2I2 560 aa12.04□□□□□ -0.48
SMU1-201ENST00000397149 TTPALQ9BTX7 342 aa12.04□□□□□ -0.48
SMU1-201ENST00000397149 FAM118AQ9NWS6 357 aa12.04□□□□□ -0.48
SMU1-201ENST00000397149 ERVK-19Q9WJR5 959 aa12.04□□□□□ -0.48
SMU1-201ENST00000397149 PSMD10O75832 226 aa12.04□□□□□ -0.48
SMU1-201ENST00000397149 LSSP48449 732 aa12.04□□□□□ -0.48
SMU1-201ENST00000397149 NUDT6P53370 316 aa12.04□□□□□ -0.48
SMU1-201ENST00000397149 CACNG1Q06432 222 aa12.04□□□□□ -0.48
SMU1-201ENST00000397149 GOLM1Q8NBJ4 401 aa12.04□□□□□ -0.48
SMU1-201ENST00000397149 BBS1Q8NFJ9 593 aa12.04□□□□□ -0.48
SMU1-201ENST00000397149 OR52E4Q8NGH9 312 aa12.04□□□□□ -0.48
SMU1-201ENST00000397149 LMX1AQ8TE12 382 aa12.04□□□□□ -0.48
SMU1-201ENST00000397149 MALSU1Q96EH3 234 aa12.04□□□□□ -0.48
SMU1-201ENST00000397149 TSNAXQ99598 290 aaKnown RBP12.04□□□□□ -0.48
SMU1-201ENST00000397149 GOLGA2P5Q9HBQ8 144 aa12.04□□□□□ -0.48
SMU1-201ENST00000397149 EIF2B3Q9NR50 452 aaKnown RBP12.04□□□□□ -0.48
SMU1-201ENST00000397149 PCDHB1Q9Y5F3 818 aa12.04□□□□□ -0.48
SMU1-201ENST00000397149 FESP07332 822 aa12.04□□□□□ -0.48
SMU1-201ENST00000397149 HTR1AP08908 422 aa12.04□□□□□ -0.48
SMU1-201ENST00000397149 GCNT1Q02742 428 aa12.04□□□□□ -0.48
SMU1-201ENST00000397149 CLCQ05315 142 aa12.04□□□□□ -0.48
SMU1-201ENST00000397149 FAM174BQ3ZCQ3 159 aa12.04□□□□□ -0.48
SMU1-201ENST00000397149 CDK15Q96Q40 435 aa12.04□□□□□ -0.48
SMU1-201ENST00000397149 B3GNT5Q9BYG0 378 aa12.04□□□□□ -0.48
SMU1-201ENST00000397149 DNAJC27Q9NZQ0 273 aa12.04□□□□□ -0.48
SMU1-201ENST00000397149 OVOS2A0A0G2JMS6 1433 aa12.04□□□□□ -0.48
SMU1-201ENST00000397149 OVOS2A0A0J9YW53 1432 aa12.04□□□□□ -0.48
SMU1-201ENST00000397149 OVOS2Q6IE36 1432 aa12.04□□□□□ -0.48
SMU1-201ENST00000397149 GPR75-ASB3A0A0A6YYF3 556 aa12.04□□□□□ -0.48
SMU1-201ENST00000397149 AGAP5A6NIR3 686 aa12.04□□□□□ -0.48
SMU1-201ENST00000397149 ERBB2P04626 1255 aa12.04□□□□□ -0.48
SMU1-201ENST00000397149 RHOP08100 348 aa12.04□□□□□ -0.48
SMU1-201ENST00000397149 ID2Q02363 134 aa12.04□□□□□ -0.48
SMU1-201ENST00000397149 OR8K5Q8NH50 307 aa12.04□□□□□ -0.48
SMU1-201ENST00000397149 JPH3Q8WXH2 748 aaPredicted RBP12.04□□□□□ -0.48
SMU1-201ENST00000397149 LRFN5Q96NI6 719 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms