RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 IL18R1Q13478 541 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 SF1Q15637 639 aaKnown RBP9.57□□□□□ -0.88
TRIM39-203ENST00000396547 FXNQ16595 210 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 LRRC26Q2I0M4 334 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 C10orf120Q5SQS8 335 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 ZNF517Q6ZMY9 492 aaPredicted RBP9.57□□□□□ -0.88
TRIM39-203ENST00000396547 ZNF598Q86UK7 904 aaKnown RBP9.57□□□□□ -0.88
TRIM39-203ENST00000396547 TMEM86AQ8N2M4 240 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 TMEM132CQ8N3T6 1108 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 TP53I13Q8NBR0 393 aaPredicted RBP9.57□□□□□ -0.88
TRIM39-203ENST00000396547 VANGL1Q8TAA9 524 aaPredicted RBP9.57□□□□□ -0.88
TRIM39-203ENST00000396547 PHOX2BQ99453 314 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 RANGRFQ9HD47 186 aaPredicted RBP9.57□□□□□ -0.88
TRIM39-203ENST00000396547 DKK3Q9UBP4 350 aa9.57□□□□□ -0.88
TRIM39-203ENST00000396547 PNMA8CA0A1B0GUJ8 204 aa9.56□□□□□ -0.88
TRIM39-203ENST00000396547 ARL5CA6NH57 179 aa9.56□□□□□ -0.88
TRIM39-203ENST00000396547 ZSCAN5BA6NJL1 495 aa9.56□□□□□ -0.88
TRIM39-203ENST00000396547 FFAR2O15552 330 aa9.56□□□□□ -0.88
TRIM39-203ENST00000396547 OTCP00480 354 aa9.56□□□□□ -0.88
TRIM39-203ENST00000396547 ITGAMP11215 1152 aa9.56□□□□□ -0.88
TRIM39-203ENST00000396547 JUNDP17535 347 aa9.56□□□□□ -0.88
TRIM39-203ENST00000396547 CTPS1P17812 591 aa9.56□□□□□ -0.88
TRIM39-203ENST00000396547 DNAJA1P31689 397 aaKnown RBP9.56□□□□□ -0.88
TRIM39-203ENST00000396547 HTR3AP46098 478 aa9.56□□□□□ -0.88
TRIM39-203ENST00000396547 SUOXP51687 545 aa9.56□□□□□ -0.88
TRIM39-203ENST00000396547 SNRPD2P62316 118 aaKnown RBP9.56□□□□□ -0.88
TRIM39-203ENST00000396547 SEMG2Q02383 582 aa9.56□□□□□ -0.88
TRIM39-203ENST00000396547 TWF1Q12792 350 aa9.56□□□□□ -0.88
TRIM39-203ENST00000396547 CAMK2GQ13555 558 aaPredicted RBP9.56□□□□□ -0.88
TRIM39-203ENST00000396547 TSTQ16762 297 aaKnown RBP9.56□□□□□ -0.88
TRIM39-203ENST00000396547 CTSL3PQ5NE16 218 aa9.56□□□□□ -0.88
TRIM39-203ENST00000396547 HSH2DQ96JZ2 352 aa9.56□□□□□ -0.88
TRIM39-203ENST00000396547 CCDC115Q96NT0 180 aa9.56□□□□□ -0.88
TRIM39-203ENST00000396547 HMX1Q9NP08 348 aaPredicted RBP9.56□□□□□ -0.88
TRIM39-203ENST00000396547 CCNB1IP1Q9NPC3 277 aa9.56□□□□□ -0.88
TRIM39-203ENST00000396547 FAM8A1Q9UBU6 413 aa9.56□□□□□ -0.88
TRIM39-203ENST00000396547 ITM2BQ9Y287 266 aa9.56□□□□□ -0.88
TRIM39-203ENST00000396547 AREL1O15033 823 aa9.56□□□□□ -0.88
TRIM39-203ENST00000396547 TSC22D2O75157 780 aa9.56□□□□□ -0.88
TRIM39-203ENST00000396547 ODC1P11926 461 aa9.56□□□□□ -0.88
TRIM39-203ENST00000396547 RHOQP17081 205 aa9.56□□□□□ -0.88
TRIM39-203ENST00000396547 ACVR2AP27037 513 aa9.56□□□□□ -0.88
TRIM39-203ENST00000396547 SOX6P35712 828 aa9.56□□□□□ -0.88
TRIM39-203ENST00000396547 TUBA1BP68363 451 aa9.56□□□□□ -0.88
TRIM39-203ENST00000396547 ST3GAL4Q11206 333 aa9.56□□□□□ -0.88
TRIM39-203ENST00000396547 SLAMF1Q13291 335 aa9.56□□□□□ -0.88
TRIM39-203ENST00000396547 DDX39BQ13838 428 aaKnown RBP9.56□□□□□ -0.88
TRIM39-203ENST00000396547 SMU1Q2TAY7 513 aa9.56□□□□□ -0.88
TRIM39-203ENST00000396547 AFTPHQ6ULP2 937 aa9.56□□□□□ -0.88
TRIM39-203ENST00000396547 TUBA1AQ71U36 451 aa9.56□□□□□ -0.88
TRIM39-203ENST00000396547 TSPYL5Q86VY4 417 aaPredicted RBP9.56□□□□□ -0.88
TRIM39-203ENST00000396547 UMODL1-AS1Q8N2C9 162 aa9.56□□□□□ -0.88
TRIM39-203ENST00000396547 TRPV1Q8NER1 839 aa9.56□□□□□ -0.88
TRIM39-203ENST00000396547 SUN5Q8TC36 379 aa9.56□□□□□ -0.88
TRIM39-203ENST00000396547 GGHQ92820 318 aa9.56□□□□□ -0.88
TRIM39-203ENST00000396547 RAPGEFL1Q9UHV5 662 aa9.56□□□□□ -0.88
TRIM39-203ENST00000396547 CLDN24A6NM45 220 aa9.55□□□□□ -0.88
TRIM39-203ENST00000396547 SEPT4O43236 478 aa9.55□□□□□ -0.88
TRIM39-203ENST00000396547 IL6P05231 212 aa9.55□□□□□ -0.88
TRIM39-203ENST00000396547 HOXB8P17481 243 aaPredicted RBP9.55□□□□□ -0.88
TRIM39-203ENST00000396547 OR1E2P47887 323 aa9.55□□□□□ -0.88
TRIM39-203ENST00000396547 ZNF45Q02386 682 aa9.55□□□□□ -0.88
TRIM39-203ENST00000396547 ELP6Q0PNE2 266 aa9.55□□□□□ -0.88
TRIM39-203ENST00000396547 IRF3Q14653 427 aa9.55□□□□□ -0.88
TRIM39-203ENST00000396547 KIAA0040Q15053 153 aa9.55□□□□□ -0.88
TRIM39-203ENST00000396547 CEP78Q5JTW2 689 aa9.55□□□□□ -0.88
TRIM39-203ENST00000396547 KDM4DQ6B0I6 523 aa9.55□□□□□ -0.88
TRIM39-203ENST00000396547 CAPN13Q6MZZ7 669 aaPredicted RBP9.55□□□□□ -0.88
TRIM39-203ENST00000396547 LINGO4Q6UY18 593 aa9.55□□□□□ -0.88
TRIM39-203ENST00000396547 ZNF551Q7Z340 670 aaPredicted RBP9.55□□□□□ -0.88
TRIM39-203ENST00000396547 SNX20Q7Z614 316 aa9.55□□□□□ -0.88
TRIM39-203ENST00000396547 ZNF605Q86T29 641 aa9.55□□□□□ -0.88
TRIM39-203ENST00000396547 RAB43Q86YS6 212 aa9.55□□□□□ -0.88
TRIM39-203ENST00000396547 CHPFQ8IZ52 775 aa9.55□□□□□ -0.88
TRIM39-203ENST00000396547 KLHDC9Q8NEP7 349 aa9.55□□□□□ -0.88
TRIM39-203ENST00000396547 KBTBD8Q8NFY9 601 aa9.55□□□□□ -0.88
TRIM39-203ENST00000396547 BHMTQ93088 406 aa9.55□□□□□ -0.88
TRIM39-203ENST00000396547 MAL2Q969L2 176 aa9.55□□□□□ -0.88
TRIM39-203ENST00000396547 ZNF566Q969W8 418 aa9.55□□□□□ -0.88
TRIM39-203ENST00000396547 TP53INP1Q96A56 240 aa9.55□□□□□ -0.88
TRIM39-203ENST00000396547 APOLD1Q96LR9 279 aa9.55□□□□□ -0.88
TRIM39-203ENST00000396547 SERPINB11Q96P15 392 aa9.55□□□□□ -0.88
TRIM39-203ENST00000396547 OR5M11Q96RB7 305 aa9.55□□□□□ -0.88
TRIM39-203ENST00000396547 PANX1Q96RD7 426 aa9.55□□□□□ -0.88
TRIM39-203ENST00000396547 TINF2Q9BSI4 451 aa9.55□□□□□ -0.88
TRIM39-203ENST00000396547 CIPCQ9C0C6 399 aa9.55□□□□□ -0.88
TRIM39-203ENST00000396547 CCDC177Q9NQR7 707 aaPredicted RBP9.55□□□□□ -0.88
TRIM39-203ENST00000396547 SNTG1Q9NSN8 517 aa9.55□□□□□ -0.88
TRIM39-203ENST00000396547 IMPAD1Q9NX62 359 aa9.55□□□□□ -0.88
TRIM39-203ENST00000396547 MUTYHQ9UIF7 546 aa9.55□□□□□ -0.88
TRIM39-203ENST00000396547 SLC6A14Q9UN76 642 aa9.55□□□□□ -0.88
TRIM39-203ENST00000396547 EFCAB10A6NFE3 127 aa9.55□□□□□ -0.88
TRIM39-203ENST00000396547 CBX4O00257 560 aa9.55□□□□□ -0.88
TRIM39-203ENST00000396547 GFRA2O00451 464 aa9.55□□□□□ -0.88
TRIM39-203ENST00000396547 IGLV3-25P01717 112 aa9.55□□□□□ -0.88
TRIM39-203ENST00000396547 RETP07949 1114 aa9.55□□□□□ -0.88
TRIM39-203ENST00000396547 ENGP17813 658 aa9.55□□□□□ -0.88
TRIM39-203ENST00000396547 FPR1P21462 350 aa9.55□□□□□ -0.88
TRIM39-203ENST00000396547 RRM2P31350 389 aa9.55□□□□□ -0.88
TRIM39-203ENST00000396547 TNFSF8P32971 234 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms