RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 NOXRED1Q6NXP6 359 aa14□□□□□ -0.17
SREBF1-205ENST00000395757 SLC39A5Q6ZMH5 540 aa14□□□□□ -0.17
SREBF1-205ENST00000395757 THOC6Q86W42 341 aaKnown RBP14□□□□□ -0.17
SREBF1-205ENST00000395757 C10orf111Q8N326 155 aa14□□□□□ -0.17
SREBF1-205ENST00000395757 KCNC2Q96PR1 638 aa14□□□□□ -0.17
SREBF1-205ENST00000395757 ACTL8Q9H568 366 aa14□□□□□ -0.17
SREBF1-205ENST00000395757 TBC1D23Q9NUY8 699 aa14□□□□□ -0.17
SREBF1-205ENST00000395757 C3orf18Q9UK00 162 aa14□□□□□ -0.17
SREBF1-205ENST00000395757 FAM32AQ9Y421 112 aaKnown RBP14□□□□□ -0.17
SREBF1-205ENST00000395757 DYRK1BQ9Y463 629 aa14□□□□□ -0.17
SREBF1-205ENST00000395757 BRWD1Q9NSI6 2320 aa14□□□□□ -0.17
SREBF1-205ENST00000395757 ANKDD1BA6NHY2 528 aa13.99□□□□□ -0.17
SREBF1-205ENST00000395757 TRIM64CA6NLI5 447 aa13.99□□□□□ -0.17
SREBF1-205ENST00000395757 RECQL5O94762 991 aaPredicted RBP13.99□□□□□ -0.17
SREBF1-205ENST00000395757 RASAL1O95294 804 aa13.99□□□□□ -0.17
SREBF1-205ENST00000395757 ANGPTL1O95841 491 aa13.99□□□□□ -0.17
SREBF1-205ENST00000395757 ERVFC1P60507 584 aa13.99□□□□□ -0.17
SREBF1-205ENST00000395757 CAMK2GQ13555 558 aaPredicted RBP13.99□□□□□ -0.17
SREBF1-205ENST00000395757 GRM2Q14416 872 aa13.99□□□□□ -0.17
SREBF1-205ENST00000395757 TCEAL5Q5H9L2 206 aa13.99□□□□□ -0.17
SREBF1-205ENST00000395757 CATSPEREQ5SY80 951 aa13.99□□□□□ -0.17
SREBF1-205ENST00000395757 TTC23Q5W5X9 447 aa13.99□□□□□ -0.17
SREBF1-205ENST00000395757 ASTLQ6HA08 431 aaPredicted RBP13.99□□□□□ -0.17
SREBF1-205ENST00000395757 PATL1Q86TB9 770 aaKnown RBP13.99□□□□□ -0.17
SREBF1-205ENST00000395757 VANGL1Q8TAA9 524 aaPredicted RBP13.99□□□□□ -0.17
SREBF1-205ENST00000395757 DOK4Q8TEW6 326 aa13.99□□□□□ -0.17
SREBF1-205ENST00000395757 TRIM39Q9HCM9 518 aa13.99□□□□□ -0.17
SREBF1-205ENST00000395757 EPCAMP16422 314 aa13.99□□□□□ -0.17
SREBF1-205ENST00000395757 SDC1P18827 310 aa13.99□□□□□ -0.17
SREBF1-205ENST00000395757 SPINT3P49223 89 aa13.99□□□□□ -0.17
SREBF1-205ENST00000395757 C21orf59P57076 290 aa13.99□□□□□ -0.17
SREBF1-205ENST00000395757 C2orf80Q0P641 193 aa13.99□□□□□ -0.17
SREBF1-205ENST00000395757 RAB33AQ14088 237 aa13.99□□□□□ -0.17
SREBF1-205ENST00000395757 DOC2AQ14183 400 aa13.99□□□□□ -0.17
SREBF1-205ENST00000395757 NKG7Q16617 165 aa13.99□□□□□ -0.17
SREBF1-205ENST00000395757 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.99□□□□□ -0.173e-9■■■■■ 39.1
SREBF1-205ENST00000395757 TMEM53Q6P2H8 277 aa13.99□□□□□ -0.17
SREBF1-205ENST00000395757 TNFAIP8L2Q6P589 184 aaPredicted RBP13.99□□□□□ -0.17
SREBF1-205ENST00000395757 DLEU7Q6UYE1 221 aa13.99□□□□□ -0.17
SREBF1-205ENST00000395757 UBE2Q1Q7Z7E8 422 aa13.99□□□□□ -0.17
SREBF1-205ENST00000395757 TMEM150AQ86TG1 271 aa13.99□□□□□ -0.17
SREBF1-205ENST00000395757 RORBQ92753 470 aa13.99□□□□□ -0.17
SREBF1-205ENST00000395757 SCRN2Q96FV2 425 aa13.99□□□□□ -0.17
SREBF1-205ENST00000395757 KRT84Q9NSB2 600 aa13.99□□□□□ -0.17
SREBF1-205ENST00000395757 ARMC1Q9NVT9 282 aa13.99□□□□□ -0.17
SREBF1-205ENST00000395757 IMPAD1Q9NX62 359 aa13.99□□□□□ -0.17
SREBF1-205ENST00000395757 PTBP2Q9UKA9 531 aaKnown RBP13.99□□□□□ -0.17
SREBF1-205ENST00000395757 PCDHGA8Q9Y5G5 932 aa13.99□□□□□ -0.17
SREBF1-205ENST00000395757 KCNE2Q9Y6J6 123 aa13.99□□□□□ -0.17
SREBF1-205ENST00000395757 C5orf58C9J3I9 102 aa13.99□□□□□ -0.17
SREBF1-205ENST00000395757 IL6P05231 212 aa13.99□□□□□ -0.17
SREBF1-205ENST00000395757 CCNA2P20248 432 aa13.99□□□□□ -0.17
SREBF1-205ENST00000395757 MAPK8P45983 427 aa13.99□□□□□ -0.17
SREBF1-205ENST00000395757 CSRP3P50461 194 aa13.99□□□□□ -0.17
SREBF1-205ENST00000395757 ATP6AP1Q15904 470 aa13.99□□□□□ -0.17
SREBF1-205ENST00000395757 CCNYL2Q5T2Q4 361 aa13.99□□□□□ -0.17
SREBF1-205ENST00000395757 ERAP2Q6P179 960 aa13.99□□□□□ -0.17
SREBF1-205ENST00000395757 ZBTB8BQ8NAP8 495 aaPredicted RBP13.99□□□□□ -0.17
SREBF1-205ENST00000395757 PIK3C3Q8NEB9 887 aa13.99□□□□□ -0.17
SREBF1-205ENST00000395757 CLP1Q92989 425 aaKnown RBP13.99□□□□□ -0.17
SREBF1-205ENST00000395757 BARD1Q99728 777 aaKnown RBP13.99□□□□□ -0.17
SREBF1-205ENST00000395757 ANKRD60Q9BZ19 345 aa13.99□□□□□ -0.17
SREBF1-205ENST00000395757 OGDHLQ9ULD0 1010 aa13.99□□□□□ -0.17
SREBF1-205ENST00000395757 PDZK1P1A8MUH7 402 aa13.98□□□□□ -0.17
SREBF1-205ENST00000395757 PITPNM1O00562 1244 aa13.98□□□□□ -0.17
SREBF1-205ENST00000395757 RHOP08100 348 aa13.98□□□□□ -0.17
SREBF1-205ENST00000395757 JAK1P23458 1154 aa13.98□□□□□ -0.17
SREBF1-205ENST00000395757 MAPK1P28482 360 aa13.98□□□□□ -0.17
SREBF1-205ENST00000395757 HOXD12P35452 270 aa13.98□□□□□ -0.17
SREBF1-205ENST00000395757 NUP107P57740 925 aa13.98□□□□□ -0.17
SREBF1-205ENST00000395757 DAB2P98082 770 aa13.98□□□□□ -0.17
SREBF1-205ENST00000395757 CNTN1Q12860 1018 aa13.98□□□□□ -0.17
SREBF1-205ENST00000395757 TP53BP2Q13625 1128 aa13.98□□□□□ -0.17
SREBF1-205ENST00000395757 GPR33Q49SQ1 333 aa13.98□□□□□ -0.17
SREBF1-205ENST00000395757 CYBRD1Q53TN4 286 aa13.98□□□□□ -0.17
SREBF1-205ENST00000395757 CCDC149Q6ZUS6 474 aa13.98□□□□□ -0.17
SREBF1-205ENST00000395757 JPH3Q8WXH2 748 aaPredicted RBP13.98□□□□□ -0.17
SREBF1-205ENST00000395757 IRF7Q92985 503 aa13.98□□□□□ -0.17
SREBF1-205ENST00000395757 SEZ6LQ9BYH1 1024 aa13.98□□□□□ -0.17
SREBF1-205ENST00000395757 P2RY12Q9H244 342 aa13.98□□□□□ -0.17
SREBF1-205ENST00000395757 SCN3BQ9NY72 215 aa13.98□□□□□ -0.17
SREBF1-205ENST00000395757 SLC25A37Q9NYZ2 338 aa13.98□□□□□ -0.17
SREBF1-205ENST00000395757 VPS29Q9UBQ0 182 aa13.98□□□□□ -0.17
SREBF1-205ENST00000395757 PHF24Q9UPV7 400 aa13.98□□□□□ -0.17
SREBF1-205ENST00000395757 MICAL3Q7RTP6 2002 aa13.98□□□□□ -0.17
SREBF1-205ENST00000395757 EBLN1P0CF75 366 aa13.98□□□□□ -0.17
SREBF1-205ENST00000395757 CDK4P11802 303 aa13.98□□□□□ -0.17
SREBF1-205ENST00000395757 HTR1EP28566 365 aa13.98□□□□□ -0.17
SREBF1-205ENST00000395757 GPC1P35052 558 aa13.98□□□□□ -0.17
SREBF1-205ENST00000395757 CDH12P55289 794 aa13.98□□□□□ -0.17
SREBF1-205ENST00000395757 HACD2Q6Y1H2 254 aa13.98□□□□□ -0.17
SREBF1-205ENST00000395757 FAM124AQ86V42 546 aa13.98□□□□□ -0.17
SREBF1-205ENST00000395757 TICAM1Q8IUC6 712 aa13.98□□□□□ -0.17
SREBF1-205ENST00000395757 ZNF740Q8NDX6 193 aa13.98□□□□□ -0.17
SREBF1-205ENST00000395757 MACROD1Q9BQ69 325 aa13.98□□□□□ -0.17
SREBF1-205ENST00000395757 CYP2A6P11509 494 aaPredicted RBP13.97□□□□□ -0.17
SREBF1-205ENST00000395757 TXNL4AP83876 142 aaKnown RBP13.97□□□□□ -0.17
SREBF1-205ENST00000395757 SLC14A1Q13336 389 aa13.97□□□□□ -0.17
SREBF1-205ENST00000395757 SLBPQ14493 270 aaKnown RBP eCLIP13.97□□□□□ -0.17
SREBF1-205ENST00000395757 XKR7Q5GH72 579 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms