RNA–Protein interactions for RNA: ENST00000394154.2

VTI1BP2-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 2, humanhuman

BASIC

Gene VTI1BP2, Length 696 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP2-201ENST00000394154 TMEM207Q6UWW9 146 aa10.71□□□□□ -0.69
VTI1BP2-201ENST00000394154 C6orf15Q6UXA7 325 aaPredicted RBP10.71□□□□□ -0.69
VTI1BP2-201ENST00000394154 OTOAQ7RTW8 1153 aa10.71□□□□□ -0.69
VTI1BP2-201ENST00000394154 MMP21Q8N119 569 aa10.71□□□□□ -0.69
VTI1BP2-201ENST00000394154 SIDT2Q8NBJ9 832 aaKnown RBP10.71□□□□□ -0.69
VTI1BP2-201ENST00000394154 CCL4L1Q8NHW4 92 aa10.71□□□□□ -0.69
VTI1BP2-201ENST00000394154 PPP1R14CQ8TAE6 165 aa10.71□□□□□ -0.69
VTI1BP2-201ENST00000394154 SNRNP40Q96DI7 357 aaKnown RBP10.71□□□□□ -0.69
VTI1BP2-201ENST00000394154 C19orf60Q96EN9 201 aa10.71□□□□□ -0.69
VTI1BP2-201ENST00000394154 PDLIM5Q96HC4 596 aaKnown RBP10.71□□□□□ -0.69
VTI1BP2-201ENST00000394154 GPR78Q96P69 363 aa10.71□□□□□ -0.69
VTI1BP2-201ENST00000394154 ULBP3Q9BZM4 244 aa10.71□□□□□ -0.69
VTI1BP2-201ENST00000394154 DERL2Q9GZP9 239 aa10.71□□□□□ -0.69
VTI1BP2-201ENST00000394154 MRPL46Q9H2W6 279 aaKnown RBP10.71□□□□□ -0.69
VTI1BP2-201ENST00000394154 MANSC1Q9H8J5 431 aa10.71□□□□□ -0.69
VTI1BP2-201ENST00000394154 TRIM39Q9HCM9 518 aa10.71□□□□□ -0.69
VTI1BP2-201ENST00000394154 APMAPQ9HDC9 416 aa10.71□□□□□ -0.69
VTI1BP2-201ENST00000394154 ACSS2Q9NR19 701 aa10.71□□□□□ -0.69
VTI1BP2-201ENST00000394154 GALPQ9UBC7 116 aa10.71□□□□□ -0.69
VTI1BP2-201ENST00000394154 CNOT6Q9ULM6 557 aaKnown RBP10.71□□□□□ -0.69
VTI1BP2-201ENST00000394154 MED16Q9Y2X0 877 aa10.71□□□□□ -0.69
VTI1BP2-201ENST00000394154 PCDHGA6Q9Y5G7 932 aa10.71□□□□□ -0.69
VTI1BP2-201ENST00000394154 NIPBLQ6KC79 2804 aaeCLIP10.71□□□□□ -0.7
VTI1BP2-201ENST00000394154 DIDO1Q9BTC0 2240 aaKnown RBP10.7□□□□□ -0.7
VTI1BP2-201ENST00000394154 TMEM202A6NGA9 273 aa10.7□□□□□ -0.7
VTI1BP2-201ENST00000394154 VEGFDO43915 354 aa10.7□□□□□ -0.7
VTI1BP2-201ENST00000394154 MTX2O75431 263 aa10.7□□□□□ -0.7
VTI1BP2-201ENST00000394154 CDK14O94921 469 aa10.7□□□□□ -0.7
VTI1BP2-201ENST00000394154 SOD1P00441 154 aa10.7□□□□□ -0.7
VTI1BP2-201ENST00000394154 PCCBP05166 539 aa10.7□□□□□ -0.7
VTI1BP2-201ENST00000394154 VIMP08670 466 aaKnown RBP10.7□□□□□ -0.7
VTI1BP2-201ENST00000394154 CBSLP0DN79 551 aa10.7□□□□□ -0.7
VTI1BP2-201ENST00000394154 CD1DP15813 335 aa10.7□□□□□ -0.7
VTI1BP2-201ENST00000394154 TFEBP19484 476 aa10.7□□□□□ -0.7
VTI1BP2-201ENST00000394154 CBSP35520 551 aa10.7□□□□□ -0.7
VTI1BP2-201ENST00000394154 PRKAA2P54646 552 aa10.7□□□□□ -0.7
VTI1BP2-201ENST00000394154 ASPHQ12797 758 aa10.7□□□□□ -0.7
VTI1BP2-201ENST00000394154 ATG16L1Q676U5 607 aa10.7□□□□□ -0.7
VTI1BP2-201ENST00000394154 TMEM220Q6QAJ8 160 aa10.7□□□□□ -0.7
VTI1BP2-201ENST00000394154 ZYG11AQ6WRX3 759 aa10.7□□□□□ -0.7
VTI1BP2-201ENST00000394154 RGS9BPQ6ZS82 235 aa10.7□□□□□ -0.7
VTI1BP2-201ENST00000394154 DET1Q7L5Y6 550 aa10.7□□□□□ -0.7
VTI1BP2-201ENST00000394154 ARHGAP22Q7Z5H3 698 aa10.7□□□□□ -0.7
VTI1BP2-201ENST00000394154 SPATA6LQ8N4H0 392 aa10.7□□□□□ -0.7
VTI1BP2-201ENST00000394154 ZBTB2Q8N680 514 aa10.7□□□□□ -0.7
VTI1BP2-201ENST00000394154 RAB3IL1Q8TBN0 382 aa10.7□□□□□ -0.7
VTI1BP2-201ENST00000394154 CD200R1Q8TD46 325 aa10.7□□□□□ -0.7
VTI1BP2-201ENST00000394154 EEF1AKMT1Q8WVE0 214 aa10.7□□□□□ -0.7
VTI1BP2-201ENST00000394154 ANKRD49Q8WVL7 239 aa10.7□□□□□ -0.7
VTI1BP2-201ENST00000394154 THAP4Q8WY91 577 aa10.7□□□□□ -0.7
VTI1BP2-201ENST00000394154 ZNF75CPQ92670 426 aaPredicted RBP10.7□□□□□ -0.7
VTI1BP2-201ENST00000394154 LINGO1Q96FE5 620 aa10.7□□□□□ -0.7
VTI1BP2-201ENST00000394154 CHMP6Q96FZ7 201 aa10.7□□□□□ -0.7
VTI1BP2-201ENST00000394154 AHCYL2Q96HN2 611 aaKnown RBP10.7□□□□□ -0.7
VTI1BP2-201ENST00000394154 ZNF514Q96K75 400 aaPredicted RBP10.7□□□□□ -0.7
VTI1BP2-201ENST00000394154 GSDMCQ9BYG8 508 aa10.7□□□□□ -0.7
VTI1BP2-201ENST00000394154 TFB2MQ9H5Q4 396 aaKnown RBP10.7□□□□□ -0.7
VTI1BP2-201ENST00000394154 PHPT1Q9NRX4 125 aaPredicted RBP10.7□□□□□ -0.7
VTI1BP2-201ENST00000394154 ASF1BQ9NVP2 202 aa10.7□□□□□ -0.7
VTI1BP2-201ENST00000394154 COPG2Q9UBF2 871 aa10.7□□□□□ -0.7
VTI1BP2-201ENST00000394154 TACC2O95359 2948 aa10.7□□□□□ -0.7
VTI1BP2-201ENST00000394154 A8MU76 341 aa10.69□□□□□ -0.7
VTI1BP2-201ENST00000394154 EIF3FO00303 357 aaPredicted RBP10.69□□□□□ -0.7
VTI1BP2-201ENST00000394154 PPM1DO15297 605 aa10.69□□□□□ -0.7
VTI1BP2-201ENST00000394154 TRIM13O60858 407 aa10.69□□□□□ -0.7
VTI1BP2-201ENST00000394154 SMIM24O75264 130 aa10.69□□□□□ -0.7
VTI1BP2-201ENST00000394154 H2AFYO75367 372 aaKnown RBP10.69□□□□□ -0.7
VTI1BP2-201ENST00000394154 GSTM1P09488 218 aa10.69□□□□□ -0.7
VTI1BP2-201ENST00000394154 ENO3P13929 434 aaPredicted RBP10.69□□□□□ -0.7
VTI1BP2-201ENST00000394154 AOAHP28039 575 aa10.69□□□□□ -0.7
VTI1BP2-201ENST00000394154 ALDH3A1P30838 453 aa10.69□□□□□ -0.7
VTI1BP2-201ENST00000394154 TRIM23P36406 574 aa10.69□□□□□ -0.7
VTI1BP2-201ENST00000394154 PPM1FP49593 454 aaPredicted RBP10.69□□□□□ -0.7
VTI1BP2-201ENST00000394154 CCL11P51671 97 aa10.69□□□□□ -0.7
VTI1BP2-201ENST00000394154 ITGA1P56199 1179 aa10.69□□□□□ -0.7
VTI1BP2-201ENST00000394154 GSTM4Q03013 218 aa10.69□□□□□ -0.7
VTI1BP2-201ENST00000394154 ILF3Q12906 894 aaKnown RBP eCLIP10.69□□□□□ -0.7
VTI1BP2-201ENST00000394154 KHDC1Q4VXA5 237 aaKnown RBP10.69□□□□□ -0.7
VTI1BP2-201ENST00000394154 TECRLQ5HYJ1 363 aa10.69□□□□□ -0.7
VTI1BP2-201ENST00000394154 SNAP47Q5SQN1 464 aa10.69□□□□□ -0.7
VTI1BP2-201ENST00000394154 PLEKHS1Q5SXH7 462 aa10.69□□□□□ -0.7
VTI1BP2-201ENST00000394154 ZNF648Q5T619 568 aaPredicted RBP10.69□□□□□ -0.7
VTI1BP2-201ENST00000394154 CPZQ66K79 652 aa10.69□□□□□ -0.7
VTI1BP2-201ENST00000394154 CPLX4Q7Z7G2 160 aa10.69□□□□□ -0.7
VTI1BP2-201ENST00000394154 ADGRG6Q86SQ4 1221 aa10.69□□□□□ -0.7
VTI1BP2-201ENST00000394154 ISCA2Q86U28 154 aa10.69□□□□□ -0.7
VTI1BP2-201ENST00000394154 C10orf107Q8IVU9 208 aa10.69□□□□□ -0.7
VTI1BP2-201ENST00000394154 CPNE9Q8IYJ1 553 aa10.69□□□□□ -0.7
VTI1BP2-201ENST00000394154 PELI3Q8N2H9 469 aa10.69□□□□□ -0.7
VTI1BP2-201ENST00000394154 RASGEF1AQ8N9B8 481 aa10.69□□□□□ -0.7
VTI1BP2-201ENST00000394154 PLA2G15Q8NCC3 412 aa10.69□□□□□ -0.7
VTI1BP2-201ENST00000394154 OR10G6Q8NH81 332 aa10.69□□□□□ -0.7
VTI1BP2-201ENST00000394154 RHEBL1Q8TAI7 183 aa10.69□□□□□ -0.7
VTI1BP2-201ENST00000394154 STAG3L4Q8TBR4 150 aa10.69□□□□□ -0.7
VTI1BP2-201ENST00000394154 KIAA1191Q96A73 305 aa10.69□□□□□ -0.7
VTI1BP2-201ENST00000394154 FUBP1Q96AE4 644 aaKnown RBP10.69□□□□□ -0.7
VTI1BP2-201ENST00000394154 CCDC126Q96EE4 140 aa10.69□□□□□ -0.7
VTI1BP2-201ENST00000394154 COX14Q96I36 57 aa10.69□□□□□ -0.7
VTI1BP2-201ENST00000394154 SLC30A3Q99726 388 aa10.69□□□□□ -0.7
VTI1BP2-201ENST00000394154 CCM2Q9BSQ5 444 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms