RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 PCNAP12004 261 aa11.77□□□□□ -0.53
SPTBN1-203ENST00000389980 CDH1P12830 882 aa11.77□□□□□ -0.53
SPTBN1-203ENST00000389980 BCKDHBP21953 392 aa11.77□□□□□ -0.53
SPTBN1-203ENST00000389980 RPS9P46781 194 aaKnown RBP11.77□□□□□ -0.53
SPTBN1-203ENST00000389980 KPNB1Q14974 876 aaKnown RBP11.77□□□□□ -0.53
SPTBN1-203ENST00000389980 HERC3Q15034 1050 aa11.77□□□□□ -0.53
SPTBN1-203ENST00000389980 GSTA3Q16772 222 aa11.77□□□□□ -0.53
SPTBN1-203ENST00000389980 GRHL2Q6ISB3 625 aa11.77□□□□□ -0.53
SPTBN1-203ENST00000389980 FAM20CQ8IXL6 584 aa11.77□□□□□ -0.53
SPTBN1-203ENST00000389980 DEFB107AQ8IZN7 70 aa11.77□□□□□ -0.53
SPTBN1-203ENST00000389980 CHCHD4Q8N4Q1 142 aa11.77□□□□□ -0.53
SPTBN1-203ENST00000389980 ZNF740Q8NDX6 193 aa11.77□□□□□ -0.53
SPTBN1-203ENST00000389980 OR52E1Q8NGJ3 308 aa11.77□□□□□ -0.53
SPTBN1-203ENST00000389980 WDR60Q8WVS4 1066 aa11.77□□□□□ -0.53
SPTBN1-203ENST00000389980 SLC5A11Q8WWX8 675 aa11.77□□□□□ -0.53
SPTBN1-203ENST00000389980 PPP3R2Q96LZ3 170 aa11.77□□□□□ -0.53
SPTBN1-203ENST00000389980 MIR1-1HGQ9H1L0 117 aa11.77□□□□□ -0.53
SPTBN1-203ENST00000389980 C1orf21Q9H246 121 aa11.77□□□□□ -0.53
SPTBN1-203ENST00000389980 LRTM1Q9HBL6 345 aa11.77□□□□□ -0.53
SPTBN1-203ENST00000389980 ZNF624Q9P2J8 865 aaPredicted RBP11.77□□□□□ -0.53
SPTBN1-203ENST00000389980 PACSIN3Q9UKS6 424 aa11.77□□□□□ -0.53
SPTBN1-203ENST00000389980 CROCCQ5TZA2 2017 aa11.77□□□□□ -0.53
SPTBN1-203ENST00000389980 TECTAO75443 2155 aa11.77□□□□□ -0.53
SPTBN1-203ENST00000389980 THADAQ6YHU6 1953 aa11.77□□□□□ -0.53
SPTBN1-203ENST00000389980 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.77□□□□□ -0.53
SPTBN1-203ENST00000389980 METTL12A8MUP2 240 aa11.77□□□□□ -0.53
SPTBN1-203ENST00000389980 SORBS2O94875 1100 aaKnown RBP11.77□□□□□ -0.53
SPTBN1-203ENST00000389980 TNFP01375 233 aa11.77□□□□□ -0.53
SPTBN1-203ENST00000389980 WNT1P04628 370 aa11.77□□□□□ -0.53
SPTBN1-203ENST00000389980 IL12AP29459 219 aa11.77□□□□□ -0.53
SPTBN1-203ENST00000389980 HNF4AP41235 474 aa11.77□□□□□ -0.53
SPTBN1-203ENST00000389980 EMX2Q04743 252 aa11.77□□□□□ -0.53
SPTBN1-203ENST00000389980 C1orf61Q13536 156 aa11.77□□□□□ -0.53
SPTBN1-203ENST00000389980 SLBPQ14493 270 aaKnown RBP eCLIP11.77□□□□□ -0.53
SPTBN1-203ENST00000389980 SF1Q15637 639 aaKnown RBP11.77□□□□□ -0.53
SPTBN1-203ENST00000389980 CYP2A13Q16696 494 aa11.77□□□□□ -0.53
SPTBN1-203ENST00000389980 VPS26BQ4G0F5 336 aa11.77□□□□□ -0.53
SPTBN1-203ENST00000389980 CYP20A1Q6UW02 462 aa11.77□□□□□ -0.53
SPTBN1-203ENST00000389980 NXPE4Q6UWF7 544 aa11.77□□□□□ -0.53
SPTBN1-203ENST00000389980 TMEFF1Q8IYR6 380 aa11.77□□□□□ -0.53
SPTBN1-203ENST00000389980 PHACTR4Q8IZ21 702 aa11.77□□□□□ -0.53
SPTBN1-203ENST00000389980 OR7G3Q8NG95 312 aa11.77□□□□□ -0.53
SPTBN1-203ENST00000389980 ZFAND2BQ8WV99 257 aa11.77□□□□□ -0.53
SPTBN1-203ENST00000389980 PATE1Q8WXA2 126 aa11.77□□□□□ -0.53
SPTBN1-203ENST00000389980 KLHDC7BQ96G42 594 aa11.77□□□□□ -0.53
SPTBN1-203ENST00000389980 APIPQ96GX9 242 aa11.77□□□□□ -0.53
SPTBN1-203ENST00000389980 HSPA12BQ96MM6 686 aa11.77□□□□□ -0.53
SPTBN1-203ENST00000389980 BRINP2Q9C0B6 783 aa11.77□□□□□ -0.53
SPTBN1-203ENST00000389980 CUEDC1Q9NWM3 386 aaPredicted RBP11.77□□□□□ -0.53
SPTBN1-203ENST00000389980 GPRC5BQ9NZH0 403 aa11.77□□□□□ -0.53
SPTBN1-203ENST00000389980 PLXND1Q9Y4D7 1925 aa11.76□□□□□ -0.53
SPTBN1-203ENST00000389980 SPEGQ15772 3267 aa11.76□□□□□ -0.53
SPTBN1-203ENST00000389980 MAGEB17A8MXT2 336 aa11.76□□□□□ -0.53
SPTBN1-203ENST00000389980 H0YIV9 168 aa11.76□□□□□ -0.53
SPTBN1-203ENST00000389980 RSL1D1O76021 490 aaKnown RBP11.76□□□□□ -0.53
SPTBN1-203ENST00000389980 ETHE1O95571 254 aa11.76□□□□□ -0.53
SPTBN1-203ENST00000389980 C1GALT1C1LP0DN25 315 aa11.76□□□□□ -0.53
SPTBN1-203ENST00000389980 CAPN3P20807 821 aa11.76□□□□□ -0.53
SPTBN1-203ENST00000389980 CASP2P42575 452 aa11.76□□□□□ -0.53
SPTBN1-203ENST00000389980 ZFP36L2P47974 494 aaKnown RBP11.76□□□□□ -0.53
SPTBN1-203ENST00000389980 LRP8Q14114 963 aa11.76□□□□□ -0.53
SPTBN1-203ENST00000389980 PTGR1Q14914 329 aa11.76□□□□□ -0.53
SPTBN1-203ENST00000389980 ARHGAP19Q14CB8 494 aa11.76□□□□□ -0.53
SPTBN1-203ENST00000389980 MMEL1Q495T6 779 aa11.76□□□□□ -0.53
SPTBN1-203ENST00000389980 DNAL1Q4LDG9 190 aa11.76□□□□□ -0.53
SPTBN1-203ENST00000389980 REP15Q6BDI9 236 aa11.76□□□□□ -0.53
SPTBN1-203ENST00000389980 LCTLQ6UWM7 567 aa11.76□□□□□ -0.53
SPTBN1-203ENST00000389980 ABRAXAS1Q6UWZ7 409 aa11.76□□□□□ -0.53
SPTBN1-203ENST00000389980 RNF165Q6ZSG1 346 aa11.76□□□□□ -0.53
SPTBN1-203ENST00000389980 DSELQ8IZU8 1212 aa11.76□□□□□ -0.53
SPTBN1-203ENST00000389980 CAMKK1Q8N5S9 505 aa11.76□□□□□ -0.53
SPTBN1-203ENST00000389980 KYQ8NBH2 561 aa11.76□□□□□ -0.53
SPTBN1-203ENST00000389980 CLHC1Q8NHS4 586 aa11.76□□□□□ -0.53
SPTBN1-203ENST00000389980 HUS1BQ8NHY5 278 aa11.76□□□□□ -0.53
SPTBN1-203ENST00000389980 PROKR1Q8TCW9 393 aa11.76□□□□□ -0.53
SPTBN1-203ENST00000389980 ACTL8Q9H568 366 aa11.76□□□□□ -0.53
SPTBN1-203ENST00000389980 MVB12BQ9H7P6 319 aa11.76□□□□□ -0.53
SPTBN1-203ENST00000389980 C1orf109Q9NX04 203 aa11.76□□□□□ -0.53
SPTBN1-203ENST00000389980 ICKQ9UPZ9 632 aa11.76□□□□□ -0.53
SPTBN1-203ENST00000389980 DLGAP4Q9Y2H0 992 aa11.76□□□□□ -0.53
SPTBN1-203ENST00000389980 DGKBQ9Y6T7 804 aa11.76□□□□□ -0.53
SPTBN1-203ENST00000389980 PIPSLA2A3N6 862 aa11.75□□□□□ -0.53
SPTBN1-203ENST00000389980 CFLARO15519 480 aa11.75□□□□□ -0.53
SPTBN1-203ENST00000389980 MAP3K13O43283 966 aa11.75□□□□□ -0.53
SPTBN1-203ENST00000389980 SLC22A3O75751 556 aa11.75□□□□□ -0.53
SPTBN1-203ENST00000389980 CD27P26842 260 aa11.75□□□□□ -0.53
SPTBN1-203ENST00000389980 SLC19A1P41440 591 aa11.75□□□□□ -0.53
SPTBN1-203ENST00000389980 ACADVLP49748 655 aa11.75□□□□□ -0.53
SPTBN1-203ENST00000389980 RAB28P51157 221 aa11.75□□□□□ -0.53
SPTBN1-203ENST00000389980 ZXDAP98168 799 aa11.75□□□□□ -0.53
SPTBN1-203ENST00000389980 PCDH1Q08174 1060 aa11.75□□□□□ -0.53
SPTBN1-203ENST00000389980 ILF3Q12906 894 aaKnown RBP eCLIP11.75□□□□□ -0.532e-6■■■■□ 22.5
SPTBN1-203ENST00000389980 KIAA0040Q15053 153 aa11.75□□□□□ -0.53
SPTBN1-203ENST00000389980 WASHC2DQ5SRD0 308 aa11.75□□□□□ -0.53
SPTBN1-203ENST00000389980 ATG9BQ674R7 924 aa11.75□□□□□ -0.53
SPTBN1-203ENST00000389980 ARMCX6Q7L4S7 300 aa11.75□□□□□ -0.53
SPTBN1-203ENST00000389980 RETREG3Q86VR2 466 aa11.75□□□□□ -0.53
SPTBN1-203ENST00000389980 LIX1Q8N485 282 aa11.75□□□□□ -0.53
SPTBN1-203ENST00000389980 SETD7Q8WTS6 366 aaKnown RBP11.75□□□□□ -0.53
SPTBN1-203ENST00000389980 SMPDL3AQ92484 453 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms