RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 ABCF3Q9NUQ8 709 aa22■■□□□ 1.11
U2AF1-202ENST00000380276 CAPN6Q9Y6Q1 641 aa22■■□□□ 1.11
U2AF1-202ENST00000380276 CRYBG3Q68DQ2 2970 aa22■■□□□ 1.11
U2AF1-202ENST00000380276 CELSR2Q9HCU4 2923 aa22■■□□□ 1.11
U2AF1-202ENST00000380276 TRGV8A0A0C4DH27 118 aa21.99■■□□□ 1.11
U2AF1-202ENST00000380276 IDSB3KWA1 339 aa21.99■■□□□ 1.11
U2AF1-202ENST00000380276 NMBRP28336 390 aa21.99■■□□□ 1.11
U2AF1-202ENST00000380276 BASP1P80723 227 aaKnown RBP21.99■■□□□ 1.11
U2AF1-202ENST00000380276 ATG9BQ674R7 924 aa21.99■■□□□ 1.11
U2AF1-202ENST00000380276 CSNK1A1LQ8N752 337 aa21.99■■□□□ 1.11
U2AF1-202ENST00000380276 HMGCLL1Q8TB92 370 aa21.99■■□□□ 1.11
U2AF1-202ENST00000380276 NR4A3Q92570 626 aa21.99■■□□□ 1.11
U2AF1-202ENST00000380276 PHF12Q96QT6 1004 aa21.99■■□□□ 1.11
U2AF1-202ENST00000380276 RUBCNLQ9H714 662 aa21.99■■□□□ 1.11
U2AF1-202ENST00000380276 SUCOQ9UBS9 1254 aaKnown RBP21.99■■□□□ 1.11
U2AF1-202ENST00000380276 MRPS2Q9Y399 296 aaKnown RBP21.99■■□□□ 1.11
U2AF1-202ENST00000380276 DIDO1Q9BTC0 2240 aaKnown RBP21.98■■□□□ 1.11
U2AF1-202ENST00000380276 OR2A25A4D2G3 310 aa21.98■■□□□ 1.11
U2AF1-202ENST00000380276 NIPSNAP2O75323 286 aa21.98■■□□□ 1.11
U2AF1-202ENST00000380276 SERPINA7P05543 415 aa21.98■■□□□ 1.11
U2AF1-202ENST00000380276 CELA2AP08217 269 aa21.98■■□□□ 1.11
U2AF1-202ENST00000380276 FDXRP22570 491 aa21.98■■□□□ 1.11
U2AF1-202ENST00000380276 RPS3P23396 243 aaKnown RBP eCLIP21.98■■□□□ 1.11
U2AF1-202ENST00000380276 TNFSF10P50591 281 aa21.98■■□□□ 1.11
U2AF1-202ENST00000380276 CTSL3PQ5NE16 218 aa21.98■■□□□ 1.11
U2AF1-202ENST00000380276 SLC13A5Q86YT5 568 aaPredicted RBP21.98■■□□□ 1.11
U2AF1-202ENST00000380276 MPP5Q8N3R9 675 aa21.98■■□□□ 1.11
U2AF1-202ENST00000380276 SUN3Q8TAQ9 357 aa21.98■■□□□ 1.11
U2AF1-202ENST00000380276 TAAR6Q96RI8 345 aa21.98■■□□□ 1.11
U2AF1-202ENST00000380276 TRIM56Q9BRZ2 755 aaKnown RBP21.98■■□□□ 1.11
U2AF1-202ENST00000380276 C14orf105Q9NVL8 296 aa21.98■■□□□ 1.11
U2AF1-202ENST00000380276 RIC8BQ9NVN3 520 aa21.98■■□□□ 1.11
U2AF1-202ENST00000380276 SH3BGRL2Q9UJC5 107 aa21.98■■□□□ 1.11
U2AF1-202ENST00000380276 RUVBL1Q9Y265 456 aaKnown RBP21.98■■□□□ 1.11
U2AF1-202ENST00000380276 KLK4Q9Y5K2 254 aa21.98■■□□□ 1.11
U2AF1-202ENST00000380276 ZGRF1Q86YA3 2104 aa21.98■■□□□ 1.11
U2AF1-202ENST00000380276 CENPEQ02224 2701 aa21.98■■□□□ 1.11
U2AF1-202ENST00000380276 IGHV1-45A0A0A0MS14 117 aa21.97■■□□□ 1.11
U2AF1-202ENST00000380276 GOLGA8KD6RF30 607 aa21.97■■□□□ 1.11
U2AF1-202ENST00000380276 GOLGA8TH3BQL2 631 aa21.97■■□□□ 1.11
U2AF1-202ENST00000380276 BMP10O95393 424 aa21.97■■□□□ 1.11
U2AF1-202ENST00000380276 CHRM3P20309 590 aa21.97■■□□□ 1.11
U2AF1-202ENST00000380276 SOX11P35716 441 aa21.97■■□□□ 1.11
U2AF1-202ENST00000380276 SRSF11Q05519 484 aaKnown RBP21.97■■□□□ 1.11
U2AF1-202ENST00000380276 DSG2Q14126 1118 aa21.97■■□□□ 1.11
U2AF1-202ENST00000380276 HKDC1Q2TB90 917 aa21.97■■□□□ 1.11
U2AF1-202ENST00000380276 PRTGQ2VWP7 1150 aa21.97■■□□□ 1.11
U2AF1-202ENST00000380276 ANKRD20A4Q4UJ75 823 aa21.97■■□□□ 1.11
U2AF1-202ENST00000380276 FBXO42Q6P3S6 717 aa21.97■■□□□ 1.11
U2AF1-202ENST00000380276 CES3Q6UWW8 571 aa21.97■■□□□ 1.11
U2AF1-202ENST00000380276 ADCK2Q7Z695 626 aa21.97■■□□□ 1.11
U2AF1-202ENST00000380276 SDCCAG8Q86SQ7 713 aaPredicted RBP21.97■■□□□ 1.11
U2AF1-202ENST00000380276 MCEMP1Q8IX19 187 aa21.97■■□□□ 1.11
U2AF1-202ENST00000380276 OR9A1PQ8NGU1 263 aa21.97■■□□□ 1.11
U2AF1-202ENST00000380276 RERGQ96A58 199 aaPredicted RBP21.97■■□□□ 1.11
U2AF1-202ENST00000380276 BFARQ9NZS9 450 aa21.97■■□□□ 1.11
U2AF1-202ENST00000380276 IGLV3-12A0A075B6K2 115 aa21.96■■□□□ 1.11
U2AF1-202ENST00000380276 PCDH17O14917 1159 aa21.96■■□□□ 1.11
U2AF1-202ENST00000380276 PFDN6O15212 129 aa21.96■■□□□ 1.11
U2AF1-202ENST00000380276 VAPBO95292 243 aa21.96■■□□□ 1.11
U2AF1-202ENST00000380276 ELAVL4P26378 380 aaKnown RBP21.96■■□□□ 1.11
U2AF1-202ENST00000380276 RPL22P35268 128 aaKnown RBP21.96■■□□□ 1.11
U2AF1-202ENST00000380276 TDGF1P3P51864 188 aa21.96■■□□□ 1.11
U2AF1-202ENST00000380276 INAQ16352 499 aa21.96■■□□□ 1.11
U2AF1-202ENST00000380276 MRNIPQ6NTE8 343 aa21.96■■□□□ 1.11
U2AF1-202ENST00000380276 HIBCHQ6NVY1 386 aaPredicted RBP21.96■■□□□ 1.11
U2AF1-202ENST00000380276 TMEM207Q6UWW9 146 aa21.96■■□□□ 1.11
U2AF1-202ENST00000380276 SMPDL3AQ92484 453 aa21.96■■□□□ 1.11
U2AF1-202ENST00000380276 PSMF1Q92530 271 aa21.96■■□□□ 1.11
U2AF1-202ENST00000380276 HAS2Q92819 552 aa21.96■■□□□ 1.11
U2AF1-202ENST00000380276 PLCD4Q9BRC7 762 aa21.96■■□□□ 1.11
U2AF1-202ENST00000380276 IL22Q9GZX6 179 aa21.96■■□□□ 1.11
U2AF1-202ENST00000380276 TREX1Q9NSU2 369 aa21.96■■□□□ 1.11
U2AF1-202ENST00000380276 TAC3Q9UHF0 121 aa21.96■■□□□ 1.11
U2AF1-202ENST00000380276 SVILO95425 2214 aa21.96■■□□□ 1.11
U2AF1-202ENST00000380276 POLEQ07864 2286 aa21.95■■□□□ 1.1
U2AF1-202ENST00000380276 A0A0A6YYC8 382 aaPredicted RBP21.95■■□□□ 1.1
U2AF1-202ENST00000380276 ARHGEF33A8MVX0 844 aa21.95■■□□□ 1.1
U2AF1-202ENST00000380276 E5RI56 91 aa21.95■■□□□ 1.1
U2AF1-202ENST00000380276 I3L1I5 382 aaPredicted RBP21.95■■□□□ 1.1
U2AF1-202ENST00000380276 UNC5CO95185 931 aa21.95■■□□□ 1.1
U2AF1-202ENST00000380276 RASAL1O95294 804 aa21.95■■□□□ 1.1
U2AF1-202ENST00000380276 MGAT1P26572 445 aa21.95■■□□□ 1.1
U2AF1-202ENST00000380276 TERF1P54274 439 aa21.95■■□□□ 1.1
U2AF1-202ENST00000380276 SYT16Q17RD7 645 aa21.95■■□□□ 1.1
U2AF1-202ENST00000380276 EEF1AKMT2Q5JPI9 291 aaKnown RBP21.95■■□□□ 1.1
U2AF1-202ENST00000380276 MFSD4BQ5TF39 518 aa21.95■■□□□ 1.1
U2AF1-202ENST00000380276 ABHD17BQ5VST6 288 aa21.95■■□□□ 1.1
U2AF1-202ENST00000380276 ZNF324BQ6AW86 544 aaPredicted RBP21.95■■□□□ 1.1
U2AF1-202ENST00000380276 LRRC8BQ6P9F7 803 aa21.95■■□□□ 1.1
U2AF1-202ENST00000380276 GSTA5Q7RTV2 222 aa21.95■■□□□ 1.1
U2AF1-202ENST00000380276 PPFIBP2Q8ND30 876 aa21.95■■□□□ 1.1
U2AF1-202ENST00000380276 RELTQ969Z4 430 aa21.95■■□□□ 1.1
U2AF1-202ENST00000380276 MVB12AQ96EY5 273 aa21.95■■□□□ 1.1
U2AF1-202ENST00000380276 MKKSQ9NPJ1 570 aaPredicted RBP21.95■■□□□ 1.1
U2AF1-202ENST00000380276 FAM114A2Q9NRY5 505 aa21.95■■□□□ 1.1
U2AF1-202ENST00000380276 UTP6Q9NYH9 597 aaKnown RBP21.95■■□□□ 1.1
U2AF1-202ENST00000380276 SEC14L3Q9UDX4 400 aa21.95■■□□□ 1.1
U2AF1-202ENST00000380276 PCYOX1Q9UHG3 505 aa21.95■■□□□ 1.1
U2AF1-202ENST00000380276 MKL2Q9ULH7 1088 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms