RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 SEC24DO94855 1032 aaPredicted RBP19.58■□□□□ 0.72
VSX1-202ENST00000376709 FSHRP23945 695 aa19.58■□□□□ 0.72
VSX1-202ENST00000376709 ZNF234Q14588 700 aa19.58■□□□□ 0.72
VSX1-202ENST00000376709 EIF4HQ15056 248 aaKnown RBP19.58■□□□□ 0.72
VSX1-202ENST00000376709 DPY19L1Q2PZI1 675 aa19.58■□□□□ 0.72
VSX1-202ENST00000376709 SFTPA1Q8IWL2 248 aa19.58■□□□□ 0.72
VSX1-202ENST00000376709 OR56A3Q8NH54 315 aa19.58■□□□□ 0.72
VSX1-202ENST00000376709 NELL1Q92832 810 aa19.58■□□□□ 0.72
VSX1-202ENST00000376709 SMARCD2Q92925 531 aa19.58■□□□□ 0.72
VSX1-202ENST00000376709 TMBIM1Q969X1 311 aa19.58■□□□□ 0.72
VSX1-202ENST00000376709 SFXN1Q9H9B4 322 aa19.58■□□□□ 0.72
VSX1-202ENST00000376709 CARS2Q9HA77 564 aaKnown RBP19.58■□□□□ 0.72
VSX1-202ENST00000376709 NTN4Q9HB63 628 aa19.58■□□□□ 0.72
VSX1-202ENST00000376709 SPATA6Q9NWH7 488 aaPredicted RBP19.58■□□□□ 0.72
VSX1-202ENST00000376709 GULP1Q9UBP9 304 aa19.58■□□□□ 0.72
VSX1-202ENST00000376709 RUVBL1Q9Y265 456 aaKnown RBP19.58■□□□□ 0.72
VSX1-202ENST00000376709 FADS3Q9Y5Q0 445 aa19.58■□□□□ 0.72
VSX1-202ENST00000376709 HEPACAM2A8MVW5 462 aa19.57■□□□□ 0.72
VSX1-202ENST00000376709 NPC1O15118 1278 aa19.57■□□□□ 0.72
VSX1-202ENST00000376709 TSTA3Q13630 321 aaPredicted RBP19.57■□□□□ 0.72
VSX1-202ENST00000376709 GAB4Q2WGN9 574 aa19.57■□□□□ 0.72
VSX1-202ENST00000376709 TBPL2Q6SJ96 375 aa19.57■□□□□ 0.72
VSX1-202ENST00000376709 MSANTD1Q6ZTZ1 278 aa19.57■□□□□ 0.72
VSX1-202ENST00000376709 SYTL1Q8IYJ3 562 aa19.57■□□□□ 0.72
VSX1-202ENST00000376709 OR7A2PQ8NGA2 310 aa19.57■□□□□ 0.72
VSX1-202ENST00000376709 ERLEC1Q96DZ1 483 aa19.57■□□□□ 0.72
VSX1-202ENST00000376709 FBXL20Q96IG2 436 aa19.57■□□□□ 0.72
VSX1-202ENST00000376709 FCRL1Q96LA6 429 aa19.57■□□□□ 0.72
VSX1-202ENST00000376709 REXO4Q9GZR2 422 aaKnown RBP19.57■□□□□ 0.72
VSX1-202ENST00000376709 RBM38Q9H0Z9 239 aaKnown RBP19.57■□□□□ 0.72
VSX1-202ENST00000376709 PCDHGA11Q9Y5H2 935 aa19.57■□□□□ 0.72
VSX1-202ENST00000376709 KCNE2Q9Y6J6 123 aa19.57■□□□□ 0.72
VSX1-202ENST00000376709 CREG1O75629 220 aa19.57■□□□□ 0.72
VSX1-202ENST00000376709 MYO1DO94832 1006 aa19.57■□□□□ 0.72
VSX1-202ENST00000376709 C1orf105O95561 183 aa19.57■□□□□ 0.72
VSX1-202ENST00000376709 SNAP29O95721 258 aa19.57■□□□□ 0.72
VSX1-202ENST00000376709 CLIC3O95833 236 aa19.57■□□□□ 0.72
VSX1-202ENST00000376709 COX7A2P14406 83 aa19.57■□□□□ 0.72
VSX1-202ENST00000376709 PTPN6P29350 595 aa19.57■□□□□ 0.72
VSX1-202ENST00000376709 CAPGP40121 348 aa19.57■□□□□ 0.72
VSX1-202ENST00000376709 SRSF11Q05519 484 aaKnown RBP19.57■□□□□ 0.72
VSX1-202ENST00000376709 GTF2H3Q13889 308 aa19.57■□□□□ 0.72
VSX1-202ENST00000376709 BCL7AQ4VC05 210 aa19.57■□□□□ 0.72
VSX1-202ENST00000376709 HM13Q8TCT9 377 aa19.57■□□□□ 0.72
VSX1-202ENST00000376709 PANX1Q96RD7 426 aa19.57■□□□□ 0.72
VSX1-202ENST00000376709 PRMT3O60678 531 aa19.56■□□□□ 0.72
VSX1-202ENST00000376709 PRKD3O94806 890 aa19.56■□□□□ 0.72
VSX1-202ENST00000376709 RETP07949 1114 aa19.56■□□□□ 0.72
VSX1-202ENST00000376709 MYCLP1P12525 358 aaPredicted RBP19.56■□□□□ 0.72
VSX1-202ENST00000376709 HSD3B1P14060 373 aa19.56■□□□□ 0.72
VSX1-202ENST00000376709 HSD3B2P26439 372 aa19.56■□□□□ 0.72
VSX1-202ENST00000376709 RPL10P27635 214 aaKnown RBP19.56■□□□□ 0.72
VSX1-202ENST00000376709 CYBRD1Q53TN4 286 aa19.56■□□□□ 0.72
VSX1-202ENST00000376709 DOK6Q6PKX4 331 aa19.56■□□□□ 0.72
VSX1-202ENST00000376709 GPR149Q86SP6 731 aa19.56■□□□□ 0.72
VSX1-202ENST00000376709 CALHM3Q86XJ0 350 aa19.56■□□□□ 0.72
VSX1-202ENST00000376709 KLHDC8AQ8IYD2 350 aa19.56■□□□□ 0.72
VSX1-202ENST00000376709 C10orf111Q8N326 155 aa19.56■□□□□ 0.72
VSX1-202ENST00000376709 OR52E4Q8NGH9 312 aa19.56■□□□□ 0.72
VSX1-202ENST00000376709 SDCCAG3Q96C92 435 aa19.56■□□□□ 0.72
VSX1-202ENST00000376709 HHIPQ96QV1 700 aa19.56■□□□□ 0.72
VSX1-202ENST00000376709 IGFLR1Q9H665 355 aa19.56■□□□□ 0.72
VSX1-202ENST00000376709 BRF2Q9HAW0 419 aa19.56■□□□□ 0.72
VSX1-202ENST00000376709 XIRP2A4UGR9 3374 aa19.56■□□□□ 0.72
VSX1-202ENST00000376709 MAGEB17A8MXT2 336 aa19.56■□□□□ 0.72
VSX1-202ENST00000376709 EVPLLA8MZ36 301 aa19.56■□□□□ 0.72
VSX1-202ENST00000376709 UPK1AO00322 258 aa19.56■□□□□ 0.72
VSX1-202ENST00000376709 SH3BGRLO75368 114 aa19.56■□□□□ 0.72
VSX1-202ENST00000376709 PRSS23O95084 383 aa19.56■□□□□ 0.72
VSX1-202ENST00000376709 CST1P01037 141 aa19.56■□□□□ 0.72
VSX1-202ENST00000376709 HOXB9P17482 250 aaPredicted RBP19.56■□□□□ 0.72
VSX1-202ENST00000376709 ARSFP54793 590 aa19.56■□□□□ 0.72
VSX1-202ENST00000376709 TBPL1P62380 186 aa19.56■□□□□ 0.72
VSX1-202ENST00000376709 ABHD18Q0P651 414 aa19.56■□□□□ 0.72
VSX1-202ENST00000376709 MTAPQ13126 283 aa19.56■□□□□ 0.72
VSX1-202ENST00000376709 SF1Q15637 639 aaKnown RBP19.56■□□□□ 0.72
VSX1-202ENST00000376709 NKG7Q16617 165 aa19.56■□□□□ 0.72
VSX1-202ENST00000376709 DUOXA1Q1HG43 343 aa19.56■□□□□ 0.72
VSX1-202ENST00000376709 ADNP2Q6IQ32 1131 aa19.56■□□□□ 0.72
VSX1-202ENST00000376709 ZNF765Q7L2R6 523 aa19.56■□□□□ 0.72
VSX1-202ENST00000376709 TRMT11Q7Z4G4 463 aaKnown RBP19.56■□□□□ 0.72
VSX1-202ENST00000376709 TMPRSS11BQ86T26 416 aa19.56■□□□□ 0.72
VSX1-202ENST00000376709 ZDHHC13Q8IUH4 622 aa19.56■□□□□ 0.72
VSX1-202ENST00000376709 OFCC1Q8IZS5 231 aa19.56■□□□□ 0.72
VSX1-202ENST00000376709 CLEC4FQ8N1N0 589 aa19.56■□□□□ 0.72
VSX1-202ENST00000376709 ZFP28Q8NHY6 868 aa19.56■□□□□ 0.72
VSX1-202ENST00000376709 ZNF480Q8WV37 535 aa19.56■□□□□ 0.72
VSX1-202ENST00000376709 NEIL2Q969S2 332 aa19.56■□□□□ 0.72
VSX1-202ENST00000376709 REXO5Q96IC2 774 aaKnown RBP19.56■□□□□ 0.72
VSX1-202ENST00000376709 DCAF13Q9NV06 445 aaKnown RBP19.56■□□□□ 0.72
VSX1-202ENST00000376709 MUC22E2RYF6 1773 aaPredicted RBP19.55■□□□□ 0.72
VSX1-202ENST00000376709 KIAA1549LQ6ZVL6 1849 aa19.55■□□□□ 0.72
VSX1-202ENST00000376709 TBC1D3BA6NDS4 549 aa19.55■□□□□ 0.72
VSX1-202ENST00000376709 GNGT2O14610 69 aa19.55■□□□□ 0.72
VSX1-202ENST00000376709 FPGTO14772 594 aa19.55■□□□□ 0.72
VSX1-202ENST00000376709 SERPINA1P01009 418 aa19.55■□□□□ 0.72
VSX1-202ENST00000376709 PON2Q15165 354 aa19.55■□□□□ 0.72
VSX1-202ENST00000376709 UGT8Q16880 541 aa19.55■□□□□ 0.72
VSX1-202ENST00000376709 ZNF658BQ4V348 819 aaPredicted RBP19.55■□□□□ 0.72
VSX1-202ENST00000376709 CAPN13Q6MZZ7 669 aaPredicted RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms