RNA–Protein interactions for RNA: ENST00000375147.7

NCBP1-202, Transcript of nuclear cap binding protein subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCBP1, Length 5,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP1-202ENST00000375147 DUX4L3P0CJ86 424 aa12.79□□□□□ -0.36
NCBP1-202ENST00000375147 DUX4L4P0CJ87 422 aa12.79□□□□□ -0.36
NCBP1-202ENST00000375147 DUX4L5P0CJ88 424 aa12.79□□□□□ -0.36
NCBP1-202ENST00000375147 DUX4L6P0CJ89 424 aa12.79□□□□□ -0.36
NCBP1-202ENST00000375147 DUX4L7P0CJ90 424 aa12.79□□□□□ -0.36
NCBP1-202ENST00000375147 BTN3A2P78410 334 aa12.79□□□□□ -0.36
NCBP1-202ENST00000375147 EIF4HQ15056 248 aaKnown RBP12.79□□□□□ -0.36
NCBP1-202ENST00000375147 C6orf136Q5SQH8 315 aa12.79□□□□□ -0.36
NCBP1-202ENST00000375147 PLEKHS1Q5SXH7 462 aa12.79□□□□□ -0.36
NCBP1-202ENST00000375147 SWT1Q5T5J6 900 aaKnown RBP12.79□□□□□ -0.36
NCBP1-202ENST00000375147 RNF220Q5VTB9 566 aa12.79□□□□□ -0.36
NCBP1-202ENST00000375147 RANBP3LQ86VV4 465 aaPredicted RBP12.79□□□□□ -0.36
NCBP1-202ENST00000375147 GJD3Q8N144 294 aa12.79□□□□□ -0.36
NCBP1-202ENST00000375147 OR10H5Q8NGA6 315 aa12.79□□□□□ -0.36
NCBP1-202ENST00000375147 PIGXQ8TBF5 258 aa12.79□□□□□ -0.36
NCBP1-202ENST00000375147 SHDQ96IW2 340 aa12.79□□□□□ -0.36
NCBP1-202ENST00000375147 POPDC3Q9HBV1 291 aa12.79□□□□□ -0.36
NCBP1-202ENST00000375147 DUX4Q9UBX2 424 aa12.79□□□□□ -0.36
NCBP1-202ENST00000375147 EMX2Q04743 252 aa12.79□□□□□ -0.36
NCBP1-202ENST00000375147 NODALQ96S42 347 aa12.79□□□□□ -0.36
NCBP1-202ENST00000375147 RACGAP1Q9H0H5 632 aa12.79□□□□□ -0.36
NCBP1-202ENST00000375147 COPS7AQ9UBW8 275 aa12.79□□□□□ -0.36
NCBP1-202ENST00000375147 GJD2Q9UKL4 321 aa12.79□□□□□ -0.36
NCBP1-202ENST00000375147 OAZ3Q9UMX2 235 aa12.79□□□□□ -0.36
NCBP1-202ENST00000375147 DLGAP4Q9Y2H0 992 aa12.79□□□□□ -0.36
NCBP1-202ENST00000375147 ACTL7AQ9Y615 435 aa12.79□□□□□ -0.36
NCBP1-202ENST00000375147 PKD1L3Q7Z443 1732 aa12.79□□□□□ -0.36
NCBP1-202ENST00000375147 XKRYO14609 159 aa12.79□□□□□ -0.36
NCBP1-202ENST00000375147 TSC22D2O75157 780 aa12.79□□□□□ -0.36
NCBP1-202ENST00000375147 REM1O75628 298 aa12.79□□□□□ -0.36
NCBP1-202ENST00000375147 KLF8O95600 359 aaPredicted RBP12.79□□□□□ -0.36
NCBP1-202ENST00000375147 MYL9P24844 172 aa12.79□□□□□ -0.36
NCBP1-202ENST00000375147 GSCP56915 257 aaPredicted RBP12.79□□□□□ -0.36
NCBP1-202ENST00000375147 DNAJB13P59910 316 aa12.79□□□□□ -0.36
NCBP1-202ENST00000375147 SCARB2Q14108 478 aa12.79□□□□□ -0.36
NCBP1-202ENST00000375147 GANABQ14697 944 aaKnown RBP12.79□□□□□ -0.36
NCBP1-202ENST00000375147 PPP1R3AQ16821 1122 aa12.79□□□□□ -0.36
NCBP1-202ENST00000375147 SLC8B1Q6J4K2 584 aa12.79□□□□□ -0.36
NCBP1-202ENST00000375147 POC5Q8NA72 575 aa12.79□□□□□ -0.36
NCBP1-202ENST00000375147 HCSTQ9UBK5 93 aa12.79□□□□□ -0.36
NCBP1-202ENST00000375147 PHF24Q9UPV7 400 aa12.79□□□□□ -0.36
NCBP1-202ENST00000375147 MYH9P35579 1960 aaKnown RBP12.79□□□□□ -0.36
NCBP1-202ENST00000375147 PRSS51A0A1B0GVH4 220 aa12.78□□□□□ -0.36
NCBP1-202ENST00000375147 CD1DP15813 335 aa12.78□□□□□ -0.36
NCBP1-202ENST00000375147 CAPGP40121 348 aa12.78□□□□□ -0.36
NCBP1-202ENST00000375147 ARCN1P48444 511 aaKnown RBP12.78□□□□□ -0.36
NCBP1-202ENST00000375147 LIN52Q52LA3 116 aa12.78□□□□□ -0.36
NCBP1-202ENST00000375147 CXXC5Q7LFL8 322 aaKnown RBP12.78□□□□□ -0.36
NCBP1-202ENST00000375147 SVOPLQ8N434 492 aa12.78□□□□□ -0.36
NCBP1-202ENST00000375147 SLC2A11Q9BYW1 496 aa12.78□□□□□ -0.36
NCBP1-202ENST00000375147 POLR2J3Q9H1A7 115 aaKnown RBP12.78□□□□□ -0.36
NCBP1-202ENST00000375147 XKR8Q9H6D3 395 aa12.78□□□□□ -0.36
NCBP1-202ENST00000375147 TPT1P8Q9HAU6 139 aa12.78□□□□□ -0.36
NCBP1-202ENST00000375147 NECTIN3Q9NQS3 549 aa12.78□□□□□ -0.36
NCBP1-202ENST00000375147 SPATA2Q9UM82 520 aa12.78□□□□□ -0.36
NCBP1-202ENST00000375147 CLCA3PQ9Y6N3 262 aa12.78□□□□□ -0.36
NCBP1-202ENST00000375147 A8MUA0 341 aa12.78□□□□□ -0.36
NCBP1-202ENST00000375147 PGRMC2O15173 223 aa12.78□□□□□ -0.36
NCBP1-202ENST00000375147 KHKP50053 298 aa12.78□□□□□ -0.36
NCBP1-202ENST00000375147 TARDBPQ13148 414 aaKnown RBP eCLIP12.78□□□□□ -0.36
NCBP1-202ENST00000375147 DSC3Q14574 896 aa12.78□□□□□ -0.36
NCBP1-202ENST00000375147 SMARCD3Q6STE5 483 aa12.78□□□□□ -0.36
NCBP1-202ENST00000375147 OR10Q1Q8NGQ4 319 aa12.78□□□□□ -0.36
NCBP1-202ENST00000375147 MCFD2Q8NI22 146 aa12.78□□□□□ -0.36
NCBP1-202ENST00000375147 KLHDC7BQ96G42 594 aa12.78□□□□□ -0.36
NCBP1-202ENST00000375147 TMED5Q9Y3A6 229 aa12.78□□□□□ -0.36
NCBP1-202ENST00000375147 TAF1P21675 1872 aa12.78□□□□□ -0.36
NCBP1-202ENST00000375147 GNB5O14775 395 aa12.78□□□□□ -0.36
NCBP1-202ENST00000375147 CASKO14936 926 aa12.78□□□□□ -0.36
NCBP1-202ENST00000375147 UBXN7O94888 489 aa12.78□□□□□ -0.36
NCBP1-202ENST00000375147 CDH1P12830 882 aa12.78□□□□□ -0.36
NCBP1-202ENST00000375147 PSMA1P25786 263 aaKnown RBP12.78□□□□□ -0.36
NCBP1-202ENST00000375147 ARRB1P49407 418 aaPredicted RBP12.78□□□□□ -0.36
NCBP1-202ENST00000375147 DSTNP60981 165 aa12.78□□□□□ -0.36
NCBP1-202ENST00000375147 GPR68Q15743 365 aa12.78□□□□□ -0.36
NCBP1-202ENST00000375147 KLHL17Q6TDP4 642 aa12.78□□□□□ -0.36
NCBP1-202ENST00000375147 SLC39A11Q8N1S5 342 aa12.78□□□□□ -0.36
NCBP1-202ENST00000375147 TP53INP1Q96A56 240 aa12.78□□□□□ -0.36
NCBP1-202ENST00000375147 PRRG4Q9BZD6 226 aa12.78□□□□□ -0.36
NCBP1-202ENST00000375147 LATS1O95835 1130 aa12.78□□□□□ -0.36
NCBP1-202ENST00000375147 EPCAMP16422 314 aa12.78□□□□□ -0.36
NCBP1-202ENST00000375147 KCNA5P22460 613 aa12.78□□□□□ -0.36
NCBP1-202ENST00000375147 CD68P34810 354 aaPredicted RBP12.78□□□□□ -0.36
NCBP1-202ENST00000375147 RAB14P61106 215 aa12.78□□□□□ -0.36
NCBP1-202ENST00000375147 RUNX3Q13761 415 aa12.78□□□□□ -0.36
NCBP1-202ENST00000375147 ALKBH2Q6NS38 261 aa12.78□□□□□ -0.36
NCBP1-202ENST00000375147 FAM43BQ6ZT52 329 aaPredicted RBP12.78□□□□□ -0.36
NCBP1-202ENST00000375147 TRPV1Q8NER1 839 aa12.78□□□□□ -0.36
NCBP1-202ENST00000375147 RHEBL1Q8TAI7 183 aa12.78□□□□□ -0.36
NCBP1-202ENST00000375147 FIBINQ8TAL6 211 aa12.78□□□□□ -0.36
NCBP1-202ENST00000375147 GPATCH1Q9BRR8 931 aaKnown RBP12.78□□□□□ -0.36
NCBP1-202ENST00000375147 HERC2P3Q9BVR0 1158 aa12.78□□□□□ -0.36
NCBP1-202ENST00000375147 MTG2Q9H4K7 406 aa12.78□□□□□ -0.36
NCBP1-202ENST00000375147 TVP23BQ9NYZ1 205 aa12.78□□□□□ -0.36
NCBP1-202ENST00000375147 PDE10AQ9Y233 779 aa12.78□□□□□ -0.36
NCBP1-202ENST00000375147 PRORSD1PA6NEY8 169 aa12.77□□□□□ -0.36
NCBP1-202ENST00000375147 ADH1BP00325 375 aa12.77□□□□□ -0.36
NCBP1-202ENST00000375147 TAS1R1Q7RTX1 841 aa12.77□□□□□ -0.36
NCBP1-202ENST00000375147 KBTBD6Q86V97 674 aa12.77□□□□□ -0.36
NCBP1-202ENST00000375147 TREML1Q86YW5 311 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms