RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 SUV39H2Q9H5I1 410 aa20.63■□□□□ 0.89
TGFBR1-202ENST00000374994 ZCCHC3Q9NUD5 404 aaKnown RBP20.63■□□□□ 0.89
TGFBR1-202ENST00000374994 RPS24P62847 133 aaKnown RBP20.63■□□□□ 0.89
TGFBR1-202ENST00000374994 TPGS2Q68CL5 300 aa20.63■□□□□ 0.89
TGFBR1-202ENST00000374994 LYSMD3Q7Z3D4 306 aa20.63■□□□□ 0.89
TGFBR1-202ENST00000374994 TMEM80Q96HE8 168 aa20.63■□□□□ 0.89
TGFBR1-202ENST00000374994 ZNF354BQ96LW1 612 aa20.63■□□□□ 0.89
TGFBR1-202ENST00000374994 KCNA7Q96RP8 456 aa20.63■□□□□ 0.89
TGFBR1-202ENST00000374994 IL4I1Q96RQ9 567 aa20.63■□□□□ 0.89
TGFBR1-202ENST00000374994 Q9Y3F1 56 aa20.63■□□□□ 0.89
TGFBR1-202ENST00000374994 PPP1R3AQ16821 1122 aa20.63■□□□□ 0.89
TGFBR1-202ENST00000374994 FBXO42Q6P3S6 717 aa20.63■□□□□ 0.89
TGFBR1-202ENST00000374994 MARCH9Q86YJ5 346 aa20.63■□□□□ 0.89
TGFBR1-202ENST00000374994 GALNT12Q8IXK2 581 aa20.63■□□□□ 0.89
TGFBR1-202ENST00000374994 ERVW-1Q9UQF0 538 aa20.63■□□□□ 0.89
TGFBR1-202ENST00000374994 SCN2BO60939 215 aa20.63■□□□□ 0.89
TGFBR1-202ENST00000374994 CLIC3O95833 236 aa20.63■□□□□ 0.89
TGFBR1-202ENST00000374994 FAM46DQ8NEK8 389 aa20.63■□□□□ 0.89
TGFBR1-202ENST00000374994 KBTBD7Q8WVZ9 684 aa20.63■□□□□ 0.89
TGFBR1-202ENST00000374994 IFT27Q9BW83 186 aa20.63■□□□□ 0.89
TGFBR1-202ENST00000374994 TRIM2Q9C040 744 aa20.63■□□□□ 0.89
TGFBR1-202ENST00000374994 COMMD4Q9H0A8 199 aa20.63■□□□□ 0.89
TGFBR1-202ENST00000374994 PCDHGA4Q9Y5G9 962 aa20.63■□□□□ 0.89
TGFBR1-202ENST00000374994 ENPP3O14638 875 aa20.62■□□□□ 0.89
TGFBR1-202ENST00000374994 ZNF563Q8TA94 476 aa20.62■□□□□ 0.89
TGFBR1-202ENST00000374994 TSEN15Q8WW01 171 aaKnown RBP20.62■□□□□ 0.89
TGFBR1-202ENST00000374994 SEZ6LQ9BYH1 1024 aa20.62■□□□□ 0.89
TGFBR1-202ENST00000374994 RSPH9Q9H1X1 276 aaPredicted RBP20.62■□□□□ 0.89
TGFBR1-202ENST00000374994 NEUROD4Q9HD90 331 aa20.62■□□□□ 0.89
TGFBR1-202ENST00000374994 FAIMQ9NVQ4 179 aa20.62■□□□□ 0.89
TGFBR1-202ENST00000374994 GSTM2P28161 218 aa20.62■□□□□ 0.89
TGFBR1-202ENST00000374994 CSTF1Q05048 431 aaKnown RBP20.62■□□□□ 0.89
TGFBR1-202ENST00000374994 ZNF155Q12901 538 aaPredicted RBP20.62■□□□□ 0.89
TGFBR1-202ENST00000374994 SLBPQ14493 270 aaKnown RBP eCLIP20.62■□□□□ 0.89
TGFBR1-202ENST00000374994 MEDAGQ5VYS4 303 aa20.62■□□□□ 0.89
TGFBR1-202ENST00000374994 RGMBQ6NW40 437 aa20.62■□□□□ 0.89
TGFBR1-202ENST00000374994 MAGIXQ9H6Y5 334 aa20.62■□□□□ 0.89
TGFBR1-202ENST00000374994 ARMC1Q9NVT9 282 aa20.62■□□□□ 0.89
TGFBR1-202ENST00000374994 MGAT4BQ9UQ53 548 aa20.62■□□□□ 0.89
TGFBR1-202ENST00000374994 GRIP1Q9Y3R0 1128 aa20.62■□□□□ 0.89
TGFBR1-202ENST00000374994 NFATC1O95644 943 aa20.62■□□□□ 0.89
TGFBR1-202ENST00000374994 PORP16435 677 aaPredicted RBP20.62■□□□□ 0.89
TGFBR1-202ENST00000374994 SP3Q02447 781 aa20.62■□□□□ 0.89
TGFBR1-202ENST00000374994 SWI5Q1ZZU3 235 aa20.62■□□□□ 0.89
TGFBR1-202ENST00000374994 UNC50Q53HI1 259 aa20.62■□□□□ 0.89
TGFBR1-202ENST00000374994 UBE2J2Q8N2K1 259 aa20.62■□□□□ 0.89
TGFBR1-202ENST00000374994 DPAGT1Q9H3H5 408 aa20.62■□□□□ 0.89
TGFBR1-202ENST00000374994 PLOD2O00469 737 aa20.62■□□□□ 0.89
TGFBR1-202ENST00000374994 WNT9AO14904 365 aa20.62■□□□□ 0.89
TGFBR1-202ENST00000374994 KDELR3O43731 214 aa20.62■□□□□ 0.89
TGFBR1-202ENST00000374994 ADAM15Q13444 863 aa20.62■□□□□ 0.89
TGFBR1-202ENST00000374994 CTC1Q2NKJ3 1217 aa20.62■□□□□ 0.89
TGFBR1-202ENST00000374994 PLA2G4EQ3MJ16 856 aa20.62■□□□□ 0.89
TGFBR1-202ENST00000374994 IMP4Q96G21 291 aaKnown RBP20.62■□□□□ 0.89
TGFBR1-202ENST00000374994 ZFP3Q96NJ6 502 aa20.62■□□□□ 0.89
TGFBR1-202ENST00000374994 KCTD3Q9Y597 815 aa20.62■□□□□ 0.89
TGFBR1-202ENST00000374994 CXCL14O95715 111 aa20.62■□□□□ 0.89
TGFBR1-202ENST00000374994 PRKACGP22612 351 aa20.62■□□□□ 0.89
TGFBR1-202ENST00000374994 ELK4P28324 431 aa20.62■□□□□ 0.89
TGFBR1-202ENST00000374994 CCL23P55773 120 aa20.62■□□□□ 0.89
TGFBR1-202ENST00000374994 JAG1P78504 1218 aa20.62■□□□□ 0.89
TGFBR1-202ENST00000374994 PHOX2BQ99453 314 aa20.62■□□□□ 0.89
TGFBR1-202ENST00000374994 NUDT6P53370 316 aa20.61■□□□□ 0.89
TGFBR1-202ENST00000374994 OR8H3Q8N146 312 aa20.61■□□□□ 0.89
TGFBR1-202ENST00000374994 UMODL1-AS1Q8N2C9 162 aa20.61■□□□□ 0.89
TGFBR1-202ENST00000374994 TOMM5Q8N4H5 51 aa20.61■□□□□ 0.89
TGFBR1-202ENST00000374994 HERPUD2Q9BSE4 406 aa20.61■□□□□ 0.89
TGFBR1-202ENST00000374994 MALT1Q9UDY8 824 aa20.61■□□□□ 0.89
TGFBR1-202ENST00000374994 MID1O15344 667 aa20.61■□□□□ 0.89
TGFBR1-202ENST00000374994 MTRF1O75570 445 aaKnown RBP20.61■□□□□ 0.89
TGFBR1-202ENST00000374994 CHRM1P11229 460 aaPredicted RBP20.61■□□□□ 0.89
TGFBR1-202ENST00000374994 CYBRD1Q53TN4 286 aa20.61■□□□□ 0.89
TGFBR1-202ENST00000374994 UBXN11Q5T124 520 aa20.61■□□□□ 0.89
TGFBR1-202ENST00000374994 ZSCAN5AQ9BUG6 496 aa20.61■□□□□ 0.89
TGFBR1-202ENST00000374994 RNF39Q9H2S5 420 aa20.61■□□□□ 0.89
TGFBR1-202ENST00000374994 SMOXQ9NWM0 555 aa20.61■□□□□ 0.89
TGFBR1-202ENST00000374994 RIMKLBQ9ULI2 386 aa20.61■□□□□ 0.89
TGFBR1-202ENST00000374994 NENFQ9UMX5 172 aa20.61■□□□□ 0.89
TGFBR1-202ENST00000374994 CMAHPQ9Y471 501 aa20.61■□□□□ 0.89
TGFBR1-202ENST00000374994 ASB3Q9Y575 518 aa20.61■□□□□ 0.89
TGFBR1-202ENST00000374994 ARL6IP5O75915 188 aa20.61■□□□□ 0.89
TGFBR1-202ENST00000374994 ACVRL1P37023 503 aa20.61■□□□□ 0.89
TGFBR1-202ENST00000374994 CSKP41240 450 aa20.61■□□□□ 0.89
TGFBR1-202ENST00000374994 ARMCX6Q7L4S7 300 aa20.61■□□□□ 0.89
TGFBR1-202ENST00000374994 SPATA9Q9BWV2 254 aa20.61■□□□□ 0.89
TGFBR1-202ENST00000374994 RC3H2Q9HBD1 1191 aaKnown RBP20.61■□□□□ 0.89
TGFBR1-202ENST00000374994 TCF7L1Q9HCS4 588 aa20.61■□□□□ 0.89
TGFBR1-202ENST00000374994 EIF3KQ9UBQ5 218 aaKnown RBP20.61■□□□□ 0.89
TGFBR1-202ENST00000374994 SPEF1Q9Y4P9 236 aa20.61■□□□□ 0.89
TGFBR1-202ENST00000374994 CSNK2A2P19784 350 aaPredicted RBP20.61■□□□□ 0.89
TGFBR1-202ENST00000374994 NT5EP21589 574 aa20.61■□□□□ 0.89
TGFBR1-202ENST00000374994 DNASE1L3Q13609 305 aa20.61■□□□□ 0.89
TGFBR1-202ENST00000374994 AKIRIN2Q53H80 203 aa20.61■□□□□ 0.89
TGFBR1-202ENST00000374994 MS4A13Q5J8X5 152 aa20.61■□□□□ 0.89
TGFBR1-202ENST00000374994 GALNT13Q8IUC8 556 aa20.61■□□□□ 0.89
TGFBR1-202ENST00000374994 SCML4Q8N228 414 aa20.61■□□□□ 0.89
TGFBR1-202ENST00000374994 MNTQ99583 582 aa20.61■□□□□ 0.89
TGFBR1-202ENST00000374994 NSUN3Q9H649 340 aaKnown RBP20.61■□□□□ 0.89
TGFBR1-202ENST00000374994 TNFRSF10DQ9UBN6 386 aa20.61■□□□□ 0.89
TGFBR1-202ENST00000374994 GIMAP2Q9UG22 337 aa20.61■□□□□ 0.89
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