RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 SLC22A10Q63ZE4 541 aa14.92□□□□□ -0.02
COL5A1-201ENST00000371817 FBXL20Q96IG2 436 aa14.92□□□□□ -0.02
COL5A1-201ENST00000371817 FLRT1Q9NZU1 646 aa14.92□□□□□ -0.02
COL5A1-201ENST00000371817 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.92□□□□□ -0.02
COL5A1-201ENST00000371817 SLC25A14O95258 325 aaPredicted RBP14.92□□□□□ -0.02
COL5A1-201ENST00000371817 HOXC12P31275 282 aa14.92□□□□□ -0.02
COL5A1-201ENST00000371817 AVPR1BP47901 424 aa14.92□□□□□ -0.02
COL5A1-201ENST00000371817 DSC3Q14574 896 aa14.92□□□□□ -0.02
COL5A1-201ENST00000371817 FBXL16Q8N461 479 aa14.92□□□□□ -0.02
COL5A1-201ENST00000371817 DNAAF1Q8NEP3 725 aa14.92□□□□□ -0.02
COL5A1-201ENST00000371817 FERD3LQ96RJ6 166 aa14.92□□□□□ -0.02
COL5A1-201ENST00000371817 QTRT2Q9H974 415 aaKnown RBP14.92□□□□□ -0.02
COL5A1-201ENST00000371817 A0A1B0GVI7 797 aa14.91□□□□□ -0.02
COL5A1-201ENST00000371817 PRORSD1PA6NEY8 169 aa14.91□□□□□ -0.02
COL5A1-201ENST00000371817 RPP40O75818 363 aaKnown RBP14.91□□□□□ -0.02
COL5A1-201ENST00000371817 PDYNP01213 254 aa14.91□□□□□ -0.02
COL5A1-201ENST00000371817 RBMXP38159 391 aaKnown RBP14.91□□□□□ -0.02
COL5A1-201ENST00000371817 TAS2R40P59535 323 aa14.91□□□□□ -0.02
COL5A1-201ENST00000371817 TATDN1Q6P1N9 297 aa14.91□□□□□ -0.02
COL5A1-201ENST00000371817 ZMIZ2Q8NF64 920 aa14.91□□□□□ -0.02
COL5A1-201ENST00000371817 TMEM39BQ9GZU3 492 aa14.91□□□□□ -0.02
COL5A1-201ENST00000371817 DFNA5O60443 496 aa14.91□□□□□ -0.02
COL5A1-201ENST00000371817 ATG13O75143 517 aa14.91□□□□□ -0.02
COL5A1-201ENST00000371817 PRKCAP17252 672 aa14.91□□□□□ -0.02
COL5A1-201ENST00000371817 RARRES1P49788 294 aa14.91□□□□□ -0.02
COL5A1-201ENST00000371817 CLCN7P51798 805 aa14.91□□□□□ -0.02
COL5A1-201ENST00000371817 CASP9P55211 416 aa14.91□□□□□ -0.02
COL5A1-201ENST00000371817 IRF2BP2Q7Z5L9 587 aa14.91□□□□□ -0.02
COL5A1-201ENST00000371817 THUMPD1Q9NXG2 353 aaKnown RBP14.91□□□□□ -0.02
COL5A1-201ENST00000371817 FLRT2O43155 660 aa14.91□□□□□ -0.02
COL5A1-201ENST00000371817 MT-ND5P03915 603 aa14.91□□□□□ -0.02
COL5A1-201ENST00000371817 EEFSECP57772 596 aaKnown RBP14.91□□□□□ -0.02
COL5A1-201ENST00000371817 PDE12Q6L8Q7 609 aaKnown RBP14.91□□□□□ -0.02
COL5A1-201ENST00000371817 SAMD10Q9BYL1 202 aa14.91□□□□□ -0.02
COL5A1-201ENST00000371817 DNMT3LQ9UJW3 386 aa14.91□□□□□ -0.02
COL5A1-201ENST00000371817 CHD1O14646 1710 aa14.91□□□□□ -0.02
COL5A1-201ENST00000371817 ERBB2P04626 1255 aa14.91□□□□□ -0.02
COL5A1-201ENST00000371817 PRKAR1BP31321 381 aa14.91□□□□□ -0.02
COL5A1-201ENST00000371817 SNAPC2Q13487 334 aa14.91□□□□□ -0.02
COL5A1-201ENST00000371817 MEP1AQ16819 746 aa14.91□□□□□ -0.02
COL5A1-201ENST00000371817 CARM1Q86X55 608 aa14.91□□□□□ -0.02
COL5A1-201ENST00000371817 COPS5Q92905 334 aa14.91□□□□□ -0.02
COL5A1-201ENST00000371817 GBA3Q9H227 469 aa14.91□□□□□ -0.02
COL5A1-201ENST00000371817 IL25Q9H293 177 aa14.91□□□□□ -0.02
COL5A1-201ENST00000371817 PXMP2Q9NR77 195 aa14.91□□□□□ -0.02
COL5A1-201ENST00000371817 CNTN6Q9UQ52 1028 aa14.91□□□□□ -0.02
COL5A1-201ENST00000371817 TEX51A0A1B0GUA7 166 aa14.91□□□□□ -0.02
COL5A1-201ENST00000371817 RBBP9O75884 186 aa14.91□□□□□ -0.02
COL5A1-201ENST00000371817 SF1Q15637 639 aaKnown RBP14.91□□□□□ -0.02
COL5A1-201ENST00000371817 CPXM1Q96SM3 734 aa14.91□□□□□ -0.02
COL5A1-201ENST00000371817 C12orf65Q9H3J6 166 aaKnown RBP14.91□□□□□ -0.02
COL5A1-201ENST00000371817 ALDH2P05091 517 aa14.91□□□□□ -0.02
COL5A1-201ENST00000371817 FOXM1Q08050 763 aa14.91□□□□□ -0.02
COL5A1-201ENST00000371817 ZNF584Q8IVC4 421 aa14.91□□□□□ -0.02
COL5A1-201ENST00000371817 PTERQ96BW5 349 aa14.91□□□□□ -0.02
COL5A1-201ENST00000371817 PYURFQ96I23 114 aa14.91□□□□□ -0.02
COL5A1-201ENST00000371817 WDR45Q9Y484 360 aa14.91□□□□□ -0.02
COL5A1-201ENST00000371817 SDK1Q7Z5N4 2213 aa14.91□□□□□ -0.02
COL5A1-201ENST00000371817 GNB3P16520 340 aa14.91□□□□□ -0.02
COL5A1-201ENST00000371817 AIF1P55008 147 aa14.91□□□□□ -0.02
COL5A1-201ENST00000371817 PGAP1Q75T13 922 aa14.91□□□□□ -0.02
COL5A1-201ENST00000371817 ERMP1Q7Z2K6 904 aa14.91□□□□□ -0.02
COL5A1-201ENST00000371817 SP8Q8IXZ3 490 aa14.91□□□□□ -0.02
COL5A1-201ENST00000371817 PSD4Q8NDX1 1056 aa14.91□□□□□ -0.02
COL5A1-201ENST00000371817 STYXQ8WUJ0 223 aa14.91□□□□□ -0.02
COL5A1-201ENST00000371817 NUSAP1Q9BXS6 441 aaKnown RBP14.91□□□□□ -0.02
COL5A1-201ENST00000371817 PCTPQ9UKL6 214 aa14.91□□□□□ -0.02
COL5A1-201ENST00000371817 PLEKHM1Q9Y4G2 1056 aa14.91□□□□□ -0.02
COL5A1-201ENST00000371817 FER1L6Q2WGJ9 1857 aa14.91□□□□□ -0.02
COL5A1-201ENST00000371817 EPHB6O15197 1021 aa14.9□□□□□ -0.02
COL5A1-201ENST00000371817 SERPINF1P36955 418 aa14.9□□□□□ -0.02
COL5A1-201ENST00000371817 CDH11P55287 796 aa14.9□□□□□ -0.02
COL5A1-201ENST00000371817 MAXP61244 160 aa14.9□□□□□ -0.02
COL5A1-201ENST00000371817 EBF4Q9BQW3 602 aa14.9□□□□□ -0.02
COL5A1-201ENST00000371817 BTBD1Q9H0C5 482 aa14.9□□□□□ -0.02
COL5A1-201ENST00000371817 TMPRSS4Q9NRS4 437 aa14.9□□□□□ -0.02
COL5A1-201ENST00000371817 UFSP2Q9NUQ7 469 aa14.9□□□□□ -0.02
COL5A1-201ENST00000371817 SMPD4Q9NXE4 827 aa14.9□□□□□ -0.02
COL5A1-201ENST00000371817 GPSM3Q9Y4H4 160 aa14.9□□□□□ -0.02
COL5A1-201ENST00000371817 TIMM13Q9Y5L4 95 aaPredicted RBP14.9□□□□□ -0.02
COL5A1-201ENST00000371817 BTN1A1Q13410 526 aa14.9□□□□□ -0.02
COL5A1-201ENST00000371817 WDR53Q7Z5U6 358 aaPredicted RBP14.9□□□□□ -0.02
COL5A1-201ENST00000371817 RAVER1Q8IY67 606 aaKnown RBP14.9□□□□□ -0.02
COL5A1-201ENST00000371817 OR6C4Q8NGE1 309 aa14.9□□□□□ -0.02
COL5A1-201ENST00000371817 FAM84AQ96KN4 292 aa14.9□□□□□ -0.02
COL5A1-201ENST00000371817 FDXACB1Q9BRP7 624 aaPredicted RBP14.9□□□□□ -0.02
COL5A1-201ENST00000371817 ULBP1Q9BZM6 244 aa14.9□□□□□ -0.02
COL5A1-201ENST00000371817 SCGB1D1O95968 90 aa14.9□□□□□ -0.02
COL5A1-201ENST00000371817 ALPPP05187 535 aa14.9□□□□□ -0.02
COL5A1-201ENST00000371817 ELK4P28324 431 aa14.9□□□□□ -0.02
COL5A1-201ENST00000371817 MED27Q6P2C8 311 aa14.9□□□□□ -0.02
COL5A1-201ENST00000371817 HHIPL2Q6UWX4 724 aa14.9□□□□□ -0.02
COL5A1-201ENST00000371817 ATP6V1C2Q8NEY4 427 aa14.9□□□□□ -0.02
COL5A1-201ENST00000371817 TXN2Q99757 166 aa14.9□□□□□ -0.02
COL5A1-201ENST00000371817 ZBTB26Q9HCK0 441 aa14.9□□□□□ -0.02
COL5A1-201ENST00000371817 NT5EP21589 574 aa14.9□□□□□ -0.02
COL5A1-201ENST00000371817 RPIAP49247 311 aa14.9□□□□□ -0.02
COL5A1-201ENST00000371817 PNLIPRP1P54315 467 aa14.9□□□□□ -0.02
COL5A1-201ENST00000371817 SCARB2Q14108 478 aa14.9□□□□□ -0.02
COL5A1-201ENST00000371817 ZBED3Q96IU2 234 aaPredicted RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms