RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 PRRG2O14669 202 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 ORC5O43913 435 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 RD3LP0DJH9 198 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 PCSK2P16519 638 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 PRKCIP41743 596 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 GRIA1P42261 906 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 GRIA3P42263 894 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 PREPP48147 710 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 SUOXP51687 545 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 BIDP55957 195 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 RUNX3Q13761 415 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 TIGD2Q4W5G0 525 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 SPDYCQ5MJ68 293 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 SLC25A25Q6KCM7 469 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 SPESP1Q6UW49 350 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 GDPD4Q6W3E5 623 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.44□□□□□ -1.06
SYNE1-206ENST00000367253 CREB3L2Q70SY1 520 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 THAP5Q7Z6K1 395 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 DEFB119Q8N690 84 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 ZNF398Q8TD17 642 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 POP5Q969H6 163 aaKnown RBP8.44□□□□□ -1.06
SYNE1-206ENST00000367253 C12orf66Q96MD2 445 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 WDR92Q96MX6 357 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 ELF4Q99607 663 aaPredicted RBP8.44□□□□□ -1.06
SYNE1-206ENST00000367253 CCM2Q9BSQ5 444 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 KLRF1Q9NZS2 232 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 FZD1Q9UP38 647 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 ATMINO43313 823 aaPredicted RBP8.44□□□□□ -1.06
SYNE1-206ENST00000367253 PENKP01210 267 aaPredicted RBP8.44□□□□□ -1.06
SYNE1-206ENST00000367253 RBM34P42696 430 aaKnown RBP8.44□□□□□ -1.06
SYNE1-206ENST00000367253 GRK6P43250 576 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 RABIFP47224 123 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 NR2C2P49116 596 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 GATMP50440 423 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 RPS21P63220 83 aaKnown RBP8.44□□□□□ -1.06
SYNE1-206ENST00000367253 MLF2Q15773 248 aaPredicted RBP8.44□□□□□ -1.06
SYNE1-206ENST00000367253 ENPP6Q6UWR7 440 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 LANCL3Q6ZV70 420 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 AMZ2Q86W34 360 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 ZNF100Q8IYN0 542 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 DEFB106AQ8N104 65 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 COMMD1Q8N668 190 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 ZNF615Q8N8J6 731 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 FBXO15Q8NCQ5 510 aaPredicted RBP8.44□□□□□ -1.06
SYNE1-206ENST00000367253 AGBL5Q8NDL9 886 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 OR56A4Q8NGH8 313 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 GAB3Q8WWW8 586 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 MRPL38Q96DV4 380 aaKnown RBP8.44□□□□□ -1.06
SYNE1-206ENST00000367253 PHF12Q96QT6 1004 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 C12orf57Q99622 126 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 MKRN2Q9H000 416 aaKnown RBP8.44□□□□□ -1.06
SYNE1-206ENST00000367253 TBC1D17Q9HA65 648 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 SHOC2Q9UQ13 582 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 INVSQ9Y283 1065 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 LYVE1Q9Y5Y7 322 aa8.44□□□□□ -1.06
SYNE1-206ENST00000367253 ANKRD33BA6NCL7 494 aa8.43□□□□□ -1.06
SYNE1-206ENST00000367253 OR6C70A6NIJ9 312 aa8.43□□□□□ -1.06
SYNE1-206ENST00000367253 IDSB3KWA1 339 aa8.43□□□□□ -1.06
SYNE1-206ENST00000367253 PFKLP17858 780 aa8.43□□□□□ -1.06
SYNE1-206ENST00000367253 CRABP2P29373 138 aa8.43□□□□□ -1.06
SYNE1-206ENST00000367253 SDC2P34741 201 aa8.43□□□□□ -1.06
SYNE1-206ENST00000367253 SRP14P37108 136 aaKnown RBP8.43□□□□□ -1.06
SYNE1-206ENST00000367253 MZT1Q08AG7 82 aa8.43□□□□□ -1.06
SYNE1-206ENST00000367253 MTAPQ13126 283 aa8.43□□□□□ -1.06
SYNE1-206ENST00000367253 GRIN2CQ14957 1233 aa8.43□□□□□ -1.06
SYNE1-206ENST00000367253 MOGQ16653 247 aa8.43□□□□□ -1.06
SYNE1-206ENST00000367253 CDKL4Q5MAI5 379 aa8.43□□□□□ -1.06
SYNE1-206ENST00000367253 DCAF12Q5T6F0 453 aa8.43□□□□□ -1.06
SYNE1-206ENST00000367253 LCN1P1Q5VSP4 162 aa8.43□□□□□ -1.06
SYNE1-206ENST00000367253 RTL4Q6ZR62 310 aa8.43□□□□□ -1.06
SYNE1-206ENST00000367253 SPATC1Q76KD6 591 aa8.43□□□□□ -1.06
SYNE1-206ENST00000367253 CHST15Q7LFX5 561 aaPredicted RBP8.43□□□□□ -1.06
SYNE1-206ENST00000367253 TDRPQ86YL5 185 aa8.43□□□□□ -1.06
SYNE1-206ENST00000367253 SLC5A8Q8N695 610 aa8.43□□□□□ -1.06
SYNE1-206ENST00000367253 DAGLBQ8NCG7 672 aa8.43□□□□□ -1.06
SYNE1-206ENST00000367253 ATG4AQ8WYN0 398 aa8.43□□□□□ -1.06
SYNE1-206ENST00000367253 MKL1Q969V6 931 aa8.43□□□□□ -1.06
SYNE1-206ENST00000367253 C12orf43Q96C57 262 aaKnown RBP8.43□□□□□ -1.06
SYNE1-206ENST00000367253 PELOQ9BRX2 385 aaKnown RBP8.43□□□□□ -1.06
SYNE1-206ENST00000367253 APOBEC3BQ9UH17 382 aaKnown RBP8.43□□□□□ -1.06
SYNE1-206ENST00000367253 CNTNAP1P78357 1384 aa8.43□□□□□ -1.06
SYNE1-206ENST00000367253 A0A1W2PPC1 479 aa8.43□□□□□ -1.06
SYNE1-206ENST00000367253 ZNF705GA8MUZ8 300 aaPredicted RBP8.43□□□□□ -1.06
SYNE1-206ENST00000367253 HEPACAM2A8MVW5 462 aa8.43□□□□□ -1.06
SYNE1-206ENST00000367253 DISC1C4P0D8 188 aa8.43□□□□□ -1.06
SYNE1-206ENST00000367253 NRP1O14786 923 aa8.43□□□□□ -1.06
SYNE1-206ENST00000367253 DDX3YO15523 660 aaKnown RBP8.43□□□□□ -1.06
SYNE1-206ENST00000367253 STBD1O95210 358 aa8.43□□□□□ -1.06
SYNE1-206ENST00000367253 SEMA4FO95754 770 aa8.43□□□□□ -1.06
SYNE1-206ENST00000367253 ATP5F1P24539 256 aaPredicted RBP8.43□□□□□ -1.06
SYNE1-206ENST00000367253 CEACAM20Q6UY09 585 aa8.43□□□□□ -1.06
SYNE1-206ENST00000367253 C1orf52Q8N6N3 182 aaKnown RBP8.43□□□□□ -1.06
SYNE1-206ENST00000367253 OR52K1Q8NGK4 314 aa8.43□□□□□ -1.06
SYNE1-206ENST00000367253 ADAMTS15Q8TE58 950 aa8.43□□□□□ -1.06
SYNE1-206ENST00000367253 KCNN1Q92952 543 aa8.43□□□□□ -1.06
SYNE1-206ENST00000367253 SLC38A2Q96QD8 506 aa8.43□□□□□ -1.06
SYNE1-206ENST00000367253 TSNAXQ99598 290 aaKnown RBP8.43□□□□□ -1.06
SYNE1-206ENST00000367253 EDEM2Q9BV94 578 aa8.43□□□□□ -1.06
SYNE1-206ENST00000367253 CCDC86Q9H6F5 360 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms