RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 ACADMP11310 421 aa11.5□□□□□ -0.57
CDC42BPA-202ENST00000366764 SUZ12Q15022 739 aaKnown RBP11.5□□□□□ -0.57
CDC42BPA-202ENST00000366764 MS4A13Q5J8X5 152 aa11.5□□□□□ -0.57
CDC42BPA-202ENST00000366764 AGMOQ6ZNB7 445 aa11.5□□□□□ -0.57
CDC42BPA-202ENST00000366764 PAK1IP1Q9NWT1 392 aaPredicted RBP11.5□□□□□ -0.57
CDC42BPA-202ENST00000366764 ERVW-1Q9UQF0 538 aa11.5□□□□□ -0.57
CDC42BPA-202ENST00000366764 FAM172BPA6NC97 362 aa11.5□□□□□ -0.57
CDC42BPA-202ENST00000366764 DUXAA6NLW8 204 aa11.5□□□□□ -0.57
CDC42BPA-202ENST00000366764 J3QRK9 145 aa11.5□□□□□ -0.57
CDC42BPA-202ENST00000366764 MAGEB3O15480 346 aa11.5□□□□□ -0.57
CDC42BPA-202ENST00000366764 SEPT4O43236 478 aa11.5□□□□□ -0.57
CDC42BPA-202ENST00000366764 NUDT13Q86X67 352 aa11.5□□□□□ -0.57
CDC42BPA-202ENST00000366764 FAM46DQ8NEK8 389 aa11.5□□□□□ -0.57
CDC42BPA-202ENST00000366764 SUN5Q8TC36 379 aa11.5□□□□□ -0.57
CDC42BPA-202ENST00000366764 FBXL8Q96CD0 374 aa11.5□□□□□ -0.57
CDC42BPA-202ENST00000366764 LRCH3Q96II8 777 aa11.5□□□□□ -0.57
CDC42BPA-202ENST00000366764 TRIT1Q9H3H1 467 aaKnown RBP11.5□□□□□ -0.57
CDC42BPA-202ENST00000366764 NMUR1Q9HB89 426 aa11.5□□□□□ -0.57
CDC42BPA-202ENST00000366764 TMEM27Q9HBJ8 222 aa11.5□□□□□ -0.57
CDC42BPA-202ENST00000366764 RBPJLQ9UBG7 517 aa11.5□□□□□ -0.57
CDC42BPA-202ENST00000366764 TRPM6Q9BX84 2022 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 OR10H2O60403 315 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 S100A9P06702 114 aaKnown RBP11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 ATXN8OSP0DMR3 200 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 ERP29P30040 261 aaKnown RBP11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 UXS1Q8NBZ7 420 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 FBXO27Q8NI29 283 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 FCRL4Q96PJ5 515 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 FARSBQ9NSD9 589 aaKnown RBP11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 TMEM181Q9P2C4 612 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 GRIP1Q9Y3R0 1128 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 PCDHGA7Q9Y5G6 932 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 A0A0U1RQF3 1178 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 ERAL1O75616 437 aaKnown RBP11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 HLA-DPB1P04440 258 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 F8A1P23610 371 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 CSTF2P33240 577 aaKnown RBP eCLIP11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 DGKQP52824 942 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 DSC3Q14574 896 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 PPP1R3AQ16821 1122 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 KBTBD7Q8WVZ9 684 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 SMG7Q92540 1137 aaKnown RBP11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 NCSTNQ92542 709 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 CREB3L1Q96BA8 519 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 ATG10Q9H0Y0 220 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 PCDHGB7Q9Y5F8 929 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 CCR8P51685 355 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 MBOAT1Q6ZNC8 495 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 NPAS3Q8IXF0 933 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 KLHL36Q8N4N3 616 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 OR4F6Q8NGB9 312 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 COL26A1Q96A83 441 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 PIWIL1Q96J94 861 aaKnown RBP11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 RABL2AQ9UBK7 228 aaPredicted RBP11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 P2RX2Q9UBL9 471 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 RABL2BQ9UNT1 228 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 C9orf64Q5T6V5 341 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 PDE12Q6L8Q7 609 aaKnown RBP11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 PRSS48Q7RTY5 328 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 NXPE1Q8N323 547 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 TPT1P8Q9HAU6 139 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 UPB1Q9UBR1 384 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 POLR1DQ9Y2S0 133 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 HEBP2Q9Y5Z4 205 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 TLR4O00206 839 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 CCRL2O00421 344 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 S1PR4O95977 384 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 PRKAR2AP13861 404 aaKnown RBP11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 STARP49675 285 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 GPR150Q8NGU9 434 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 KCNN1Q92952 543 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 CNPPD1Q9BV87 410 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 TMEM106CQ9BVX2 250 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 SNTG1Q9NSN8 517 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 A0A0J9YVX5 310 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 STXBP1P61764 594 aaKnown RBP11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 ADAM15Q13444 863 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 UNC50Q53HI1 259 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 SPANXN4Q5MJ08 99 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 SHQ1Q6PI26 577 aaKnown RBP11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 ANKRD13BQ86YJ7 626 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 NSUN3Q9H649 340 aaKnown RBP11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 PCDHGB6Q9Y5F9 930 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 MAB21L1Q13394 359 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 PJA1Q8NG27 643 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 MARCH7Q9H992 704 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 TMEM165Q9HC07 324 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 NR2E3Q9Y5X4 410 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 COLEC10Q9Y6Z7 277 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 IRS2Q9Y4H2 1338 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 TBC1D3BA6NDS4 549 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 ZNF182P17025 639 aaPredicted RBP11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 TARDBPQ13148 414 aaKnown RBP eCLIP11.49□□□□□ -0.572e-9■■■■□ 20.3
CDC42BPA-202ENST00000366764 OSTM1Q86WC4 334 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 GPR152Q8TDT2 470 aa11.49□□□□□ -0.57
CDC42BPA-202ENST00000366764 KDELR3O43731 214 aa11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 PM20D1Q6GTS8 502 aa11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 THRSPQ92748 146 aa11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 HAS3O00219 553 aa11.48□□□□□ -0.57
CDC42BPA-202ENST00000366764 JAG1P78504 1218 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms