RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 SCAMP4Q969E2 229 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 SH3YL1Q96HL8 342 aaPredicted RBP6.64□□□□□ -1.35
RTN4-203ENST00000357376 HTATIP2Q9BUP3 242 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 ITPAQ9BY32 194 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 NLNQ9BYT8 704 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 KCNH6Q9H252 994 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 IL26Q9NPH9 171 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 CTPS2Q9NRF8 586 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 GIMAP4Q9NUV9 329 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 ABCG2Q9UNQ0 655 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 KLHL20Q9Y2M5 609 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 TMA7Q9Y2S6 64 aaKnown RBP6.64□□□□□ -1.35
RTN4-203ENST00000357376 YIPF1Q9Y548 306 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 CORINQ9Y5Q5 1042 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 PTPRFP10586 1907 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 FAM155AB1AL88 458 aaPredicted RBP6.64□□□□□ -1.35
RTN4-203ENST00000357376 M0R129 80 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 ADAMDEC1O15204 470 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 ARHGEF9O43307 516 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 SMAD6O43541 496 aaKnown RBP6.64□□□□□ -1.35
RTN4-203ENST00000357376 TGFB1P01137 390 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 RPLP0P05388 317 aaKnown RBP6.64□□□□□ -1.35
RTN4-203ENST00000357376 PIM1P11309 404 aaPredicted RBP6.64□□□□□ -1.35
RTN4-203ENST00000357376 SELPP16109 830 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 TNNI3P19429 210 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 ADARB1P78563 741 aaKnown RBP6.64□□□□□ -1.35
RTN4-203ENST00000357376 PCBP2Q15366 365 aaKnown RBP eCLIP6.64□□□□□ -1.35
RTN4-203ENST00000357376 VMACQ2NL98 169 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 ZNF404Q494X3 552 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 GPR33Q49SQ1 333 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 ZC3H12BQ5HYM0 836 aaKnown RBP6.64□□□□□ -1.35
RTN4-203ENST00000357376 TPRG1LQ5T0D9 272 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.64□□□□□ -1.35
RTN4-203ENST00000357376 ZNF648Q5T619 568 aaPredicted RBP6.64□□□□□ -1.35
RTN4-203ENST00000357376 ANXA8L1Q5VT79 327 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 SUSD1Q6UWL2 747 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 CYHR1Q6ZMK1 362 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 LIMS2Q7Z4I7 341 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 NANOGNBQ7Z5D8 188 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 CYP4Z1Q86W10 505 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 IFNL1Q8IU54 200 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 CMTM8Q8IZV2 173 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 APCDD1Q8J025 514 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 TCAIMQ8N3R3 496 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 ZNF366Q8N895 744 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 PSD4Q8NDX1 1056 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 ZNF548Q8NEK5 533 aaPredicted RBP6.64□□□□□ -1.35
RTN4-203ENST00000357376 NACC2Q96BF6 587 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 DMRTB1Q96MA1 342 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 DEPDC7Q96QD5 511 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 CNPPD1Q9BV87 410 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 SMG9Q9H0W8 520 aaKnown RBP6.64□□□□□ -1.35
RTN4-203ENST00000357376 FAM83DQ9H4H8 585 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 IKZF5Q9H5V7 419 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 TM9SF3Q9HD45 589 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 ZDHHC3Q9NYG2 299 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 RNF6Q9Y252 685 aa6.64□□□□□ -1.35
RTN4-203ENST00000357376 RUVBL1Q9Y265 456 aaKnown RBP6.64□□□□□ -1.35
RTN4-203ENST00000357376 A0A096LPI6 279 aa6.63□□□□□ -1.35
RTN4-203ENST00000357376 SMIM30A4D0T7 59 aa6.63□□□□□ -1.35
RTN4-203ENST00000357376 ASPDHA6ND91 283 aa6.63□□□□□ -1.35
RTN4-203ENST00000357376 C9P02748 559 aa6.63□□□□□ -1.35
RTN4-203ENST00000357376 C8GP07360 202 aa6.63□□□□□ -1.35
RTN4-203ENST00000357376 CYP2A6P11509 494 aaPredicted RBP6.63□□□□□ -1.35
RTN4-203ENST00000357376 BPIP17213 487 aa6.63□□□□□ -1.35
RTN4-203ENST00000357376 ITGA2P17301 1181 aa6.63□□□□□ -1.35
RTN4-203ENST00000357376 ACRV1P26436 265 aa6.63□□□□□ -1.35
RTN4-203ENST00000357376 PREPP48147 710 aa6.63□□□□□ -1.35
RTN4-203ENST00000357376 UAP1L1Q3KQV9 507 aa6.63□□□□□ -1.35
RTN4-203ENST00000357376 GCNT6Q5T4J0 391 aa6.63□□□□□ -1.35
RTN4-203ENST00000357376 TNFAIP8L2Q6P589 184 aaPredicted RBP6.63□□□□□ -1.35
RTN4-203ENST00000357376 DLEU7Q6UYE1 221 aa6.63□□□□□ -1.35
RTN4-203ENST00000357376 Q6ZVU0 165 aa6.63□□□□□ -1.35
RTN4-203ENST00000357376 NPAS4Q8IUM7 802 aa6.63□□□□□ -1.35
RTN4-203ENST00000357376 DPP10Q8N608 796 aa6.63□□□□□ -1.35
RTN4-203ENST00000357376 BPIFB1Q8TDL5 484 aa6.63□□□□□ -1.35
RTN4-203ENST00000357376 RHBDF1Q96CC6 855 aa6.63□□□□□ -1.35
RTN4-203ENST00000357376 YME1L1Q96TA2 773 aa6.63□□□□□ -1.35
RTN4-203ENST00000357376 WRAP53Q9BUR4 548 aaKnown RBP6.63□□□□□ -1.35
RTN4-203ENST00000357376 SLC29A3Q9BZD2 475 aa6.63□□□□□ -1.35
RTN4-203ENST00000357376 ACPTQ9BZG2 426 aa6.63□□□□□ -1.35
RTN4-203ENST00000357376 CRISPLD1Q9H336 500 aa6.63□□□□□ -1.35
RTN4-203ENST00000357376 DCAF13Q9NV06 445 aaKnown RBP6.63□□□□□ -1.35
RTN4-203ENST00000357376 ENPP5Q9UJA9 477 aa6.63□□□□□ -1.35
RTN4-203ENST00000357376 INTS6Q9UL03 887 aaKnown RBP6.63□□□□□ -1.35
RTN4-203ENST00000357376 CORO2BQ9UQ03 480 aa6.63□□□□□ -1.35
RTN4-203ENST00000357376 ANGPT4Q9Y264 503 aa6.63□□□□□ -1.35
RTN4-203ENST00000357376 PCDHGB3Q9Y5G1 929 aa6.63□□□□□ -1.35
RTN4-203ENST00000357376 TCRBV5S2A0A599 114 aa6.63□□□□□ -1.35
RTN4-203ENST00000357376 H3BM21 787 aa6.63□□□□□ -1.35
RTN4-203ENST00000357376 M0QX08 132 aa6.63□□□□□ -1.35
RTN4-203ENST00000357376 ARNTLO00327 626 aa6.63□□□□□ -1.35
RTN4-203ENST00000357376 ADAM12O43184 909 aa6.63□□□□□ -1.35
RTN4-203ENST00000357376 PCDH7O60245 1069 aa6.63□□□□□ -1.35
RTN4-203ENST00000357376 B4GALT3O60512 393 aa6.63□□□□□ -1.35
RTN4-203ENST00000357376 TMCC2O75069 709 aa6.63□□□□□ -1.35
RTN4-203ENST00000357376 TSC22D2O75157 780 aa6.63□□□□□ -1.35
RTN4-203ENST00000357376 PRAMEF12O95522 483 aa6.63□□□□□ -1.35
RTN4-203ENST00000357376 TSPAN19P0C672 248 aa6.63□□□□□ -1.35
RTN4-203ENST00000357376 FSHRP23945 695 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms