RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 STOX2Q9P2F5 926 aaPredicted RBP21.57■■□□□ 1.04
NKX2-1-201ENST00000354822 CDH7Q9ULB5 785 aa21.57■■□□□ 1.04
NKX2-1-201ENST00000354822 PLXNA2O75051 1894 aa21.56■■□□□ 1.04
NKX2-1-201ENST00000354822 SLC5A10A0PJK1 596 aa21.56■■□□□ 1.04
NKX2-1-201ENST00000354822 CLIC1O00299 241 aa21.56■■□□□ 1.04
NKX2-1-201ENST00000354822 TSPAN6O43657 245 aa21.56■■□□□ 1.04
NKX2-1-201ENST00000354822 EPN2O95208 641 aa21.56■■□□□ 1.04
NKX2-1-201ENST00000354822 CTSLP07711 333 aa21.56■■□□□ 1.04
NKX2-1-201ENST00000354822 GPX2P18283 190 aa21.56■■□□□ 1.04
NKX2-1-201ENST00000354822 ELK4P28324 431 aa21.56■■□□□ 1.04
NKX2-1-201ENST00000354822 SHMT2P34897 504 aa21.56■■□□□ 1.04
NKX2-1-201ENST00000354822 RAD23AP54725 363 aa21.56■■□□□ 1.04
NKX2-1-201ENST00000354822 TPD52P55327 224 aaPredicted RBP21.56■■□□□ 1.04
NKX2-1-201ENST00000354822 ACSM2AQ08AH3 577 aa21.56■■□□□ 1.04
NKX2-1-201ENST00000354822 TMEM115Q12893 351 aaPredicted RBP21.56■■□□□ 1.04
NKX2-1-201ENST00000354822 TOP3AQ13472 1001 aaPredicted RBP21.56■■□□□ 1.04
NKX2-1-201ENST00000354822 NAE1Q13564 534 aa21.56■■□□□ 1.04
NKX2-1-201ENST00000354822 EEF1AKMT2Q5JPI9 291 aaKnown RBP21.56■■□□□ 1.04
NKX2-1-201ENST00000354822 ACSM2BQ68CK6 577 aa21.56■■□□□ 1.04
NKX2-1-201ENST00000354822 CES5AQ6NT32 575 aa21.56■■□□□ 1.04
NKX2-1-201ENST00000354822 C10orf111Q8N326 155 aa21.56■■□□□ 1.04
NKX2-1-201ENST00000354822 RASGEF1AQ8N9B8 481 aa21.56■■□□□ 1.04
NKX2-1-201ENST00000354822 NRBF2Q96F24 287 aa21.56■■□□□ 1.04
NKX2-1-201ENST00000354822 LIN28AQ9H9Z2 209 aaKnown RBP21.56■■□□□ 1.04
NKX2-1-201ENST00000354822 EBF1Q9UH73 591 aa21.56■■□□□ 1.04
NKX2-1-201ENST00000354822 FBXO10Q9UK96 956 aa21.56■■□□□ 1.04
NKX2-1-201ENST00000354822 UTS2RQ9UKP6 389 aa21.56■■□□□ 1.04
NKX2-1-201ENST00000354822 BLOC1S6Q9UL45 172 aa21.56■■□□□ 1.04
NKX2-1-201ENST00000354822 A0A1B0GVG6 124 aa21.55■■□□□ 1.04
NKX2-1-201ENST00000354822 COX7A2P14406 83 aa21.55■■□□□ 1.04
NKX2-1-201ENST00000354822 CD22P20273 847 aa21.55■■□□□ 1.04
NKX2-1-201ENST00000354822 HOXA9P31269 272 aa21.55■■□□□ 1.04
NKX2-1-201ENST00000354822 ASMTP46597 345 aa21.55■■□□□ 1.04
NKX2-1-201ENST00000354822 GRSF1Q12849 480 aaKnown RBP eCLIP21.55■■□□□ 1.04
NKX2-1-201ENST00000354822 DCTN2Q13561 401 aaKnown RBP21.55■■□□□ 1.04
NKX2-1-201ENST00000354822 LAPTM5Q13571 262 aa21.55■■□□□ 1.04
NKX2-1-201ENST00000354822 UGT8Q16880 541 aa21.55■■□□□ 1.04
NKX2-1-201ENST00000354822 SP7Q8TDD2 431 aaPredicted RBP21.55■■□□□ 1.04
NKX2-1-201ENST00000354822 MYLIPQ8WY64 445 aa21.55■■□□□ 1.04
NKX2-1-201ENST00000354822 MBOAT4Q96T53 435 aa21.55■■□□□ 1.04
NKX2-1-201ENST00000354822 EPHX3Q9H6B9 360 aa21.55■■□□□ 1.04
NKX2-1-201ENST00000354822 CXXC1Q9P0U4 656 aaPredicted RBP21.55■■□□□ 1.04
NKX2-1-201ENST00000354822 RPS6KA6Q9UK32 745 aa21.55■■□□□ 1.04
NKX2-1-201ENST00000354822 MAGEB17A8MXT2 336 aa21.55■■□□□ 1.04
NKX2-1-201ENST00000354822 PSMD11O00231 422 aa21.55■■□□□ 1.04
NKX2-1-201ENST00000354822 NOBOXO60393 691 aa21.55■■□□□ 1.04
NKX2-1-201ENST00000354822 SCN2BO60939 215 aa21.55■■□□□ 1.04
NKX2-1-201ENST00000354822 ELFN1P0C7U0 828 aa21.55■■□□□ 1.04
NKX2-1-201ENST00000354822 CRHBPP24387 322 aa21.55■■□□□ 1.04
NKX2-1-201ENST00000354822 BMPR1AP36894 532 aa21.55■■□□□ 1.04
NKX2-1-201ENST00000354822 IL18R1Q13478 541 aa21.55■■□□□ 1.04
NKX2-1-201ENST00000354822 TUBA3CQ13748 450 aa21.55■■□□□ 1.04
NKX2-1-201ENST00000354822 SKIV2LQ15477 1246 aaKnown RBP21.55■■□□□ 1.04
NKX2-1-201ENST00000354822 LIPIQ6XZB0 460 aa21.55■■□□□ 1.04
NKX2-1-201ENST00000354822 ARL10Q8N8L6 244 aa21.55■■□□□ 1.04
NKX2-1-201ENST00000354822 OR56A3Q8NH54 315 aa21.55■■□□□ 1.04
NKX2-1-201ENST00000354822 SORCS1Q8WY21 1168 aa21.55■■□□□ 1.04
NKX2-1-201ENST00000354822 AP2M1Q96CW1 435 aa21.55■■□□□ 1.04
NKX2-1-201ENST00000354822 RAD9AQ99638 391 aa21.55■■□□□ 1.04
NKX2-1-201ENST00000354822 EBPLQ9BY08 206 aa21.55■■□□□ 1.04
NKX2-1-201ENST00000354822 WNT6Q9Y6F9 365 aa21.55■■□□□ 1.04
NKX2-1-201ENST00000354822 DOCK6Q96HP0 2047 aa21.54■■□□□ 1.04
NKX2-1-201ENST00000354822 TMEM202A6NGA9 273 aa21.54■■□□□ 1.04
NKX2-1-201ENST00000354822 E7EQ34 232 aa21.54■■□□□ 1.04
NKX2-1-201ENST00000354822 ABCB7O75027 752 aa21.54■■□□□ 1.04
NKX2-1-201ENST00000354822 ENGP17813 658 aa21.54■■□□□ 1.04
NKX2-1-201ENST00000354822 CTNNB1P35222 781 aa21.54■■□□□ 1.04
NKX2-1-201ENST00000354822 MMP12P39900 470 aa21.54■■□□□ 1.04
NKX2-1-201ENST00000354822 YAP1P46937 504 aaKnown RBP21.54■■□□□ 1.04
NKX2-1-201ENST00000354822 ARHGDIAP52565 204 aa21.54■■□□□ 1.04
NKX2-1-201ENST00000354822 ZNF648Q5T619 568 aaPredicted RBP21.54■■□□□ 1.04
NKX2-1-201ENST00000354822 CPZQ66K79 652 aa21.54■■□□□ 1.04
NKX2-1-201ENST00000354822 SHQ1Q6PI26 577 aaKnown RBP21.54■■□□□ 1.04
NKX2-1-201ENST00000354822 ZDHHC21Q8IVQ6 265 aa21.54■■□□□ 1.04
NKX2-1-201ENST00000354822 SLC22A15Q8IZD6 547 aa21.54■■□□□ 1.04
NKX2-1-201ENST00000354822 OR7A2PQ8NGA2 310 aa21.54■■□□□ 1.04
NKX2-1-201ENST00000354822 C11orf24Q96F05 449 aaPredicted RBP21.54■■□□□ 1.04
NKX2-1-201ENST00000354822 MED8Q96G25 268 aa21.54■■□□□ 1.04
NKX2-1-201ENST00000354822 MTERF1Q99551 399 aaKnown RBP21.54■■□□□ 1.04
NKX2-1-201ENST00000354822 AMBRA1Q9C0C7 1298 aa21.54■■□□□ 1.04
NKX2-1-201ENST00000354822 ADNPQ9H2P0 1102 aa21.54■■□□□ 1.04
NKX2-1-201ENST00000354822 SGK2Q9HBY8 427 aa21.54■■□□□ 1.04
NKX2-1-201ENST00000354822 CDC14AQ9UNH5 594 aa21.54■■□□□ 1.04
NKX2-1-201ENST00000354822 LOC100130705A0A1B0GUX0 176 aa21.54■■□□□ 1.04
NKX2-1-201ENST00000354822 KRT87PA6NCN2 255 aa21.54■■□□□ 1.04
NKX2-1-201ENST00000354822 HS6ST1O60243 411 aa21.54■■□□□ 1.04
NKX2-1-201ENST00000354822 XYLBO75191 536 aa21.54■■□□□ 1.04
NKX2-1-201ENST00000354822 RPS6KA3P51812 740 aa21.54■■□□□ 1.04
NKX2-1-201ENST00000354822 CTSCP53634 463 aa21.54■■□□□ 1.04
NKX2-1-201ENST00000354822 PNLIPRP1P54315 467 aa21.54■■□□□ 1.04
NKX2-1-201ENST00000354822 WNT3P56703 355 aa21.54■■□□□ 1.04
NKX2-1-201ENST00000354822 GABARAPL2P60520 117 aa21.54■■□□□ 1.04
NKX2-1-201ENST00000354822 KCNAB2Q13303 367 aa21.54■■□□□ 1.04
NKX2-1-201ENST00000354822 ACOX1Q15067 660 aa21.54■■□□□ 1.04
NKX2-1-201ENST00000354822 VMACQ2NL98 169 aa21.54■■□□□ 1.04
NKX2-1-201ENST00000354822 C6orf141Q5SZD1 244 aa21.54■■□□□ 1.04
NKX2-1-201ENST00000354822 ZCCHC8Q6NZY4 707 aaKnown RBP21.54■■□□□ 1.04
NKX2-1-201ENST00000354822 ZNF621Q6ZSS3 439 aa21.54■■□□□ 1.04
NKX2-1-201ENST00000354822 ARHGAP22Q7Z5H3 698 aa21.54■■□□□ 1.04
NKX2-1-201ENST00000354822 VPS37AQ8NEZ2 397 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms