RNA–Protein interactions for RNA: ENST00000341567.8

TMEM248-201, Transcript of transmembrane protein 248, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM248, Length 4,229 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-201ENST00000341567 FBXW2Q9UKT8 454 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 KCNK6Q9Y257 313 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 SPACA6W5XKT8 324 aa13.16□□□□□ -0.3
TMEM248-201ENST00000341567 LATO43561 262 aa13.15□□□□□ -0.3
TMEM248-201ENST00000341567 AP2A2O94973 939 aa13.15□□□□□ -0.3
TMEM248-201ENST00000341567 GABRB3P28472 473 aa13.15□□□□□ -0.3
TMEM248-201ENST00000341567 OR4D2P58180 307 aa13.15□□□□□ -0.3
TMEM248-201ENST00000341567 PPP2R2DQ66LE6 453 aa13.15□□□□□ -0.3
TMEM248-201ENST00000341567 KAT2AQ92830 837 aa13.15□□□□□ -0.3
TMEM248-201ENST00000341567 TCEAL4Q96EI5 215 aa13.15□□□□□ -0.3
TMEM248-201ENST00000341567 YIPF4Q9BSR8 244 aa13.15□□□□□ -0.3
TMEM248-201ENST00000341567 C11orf84Q9BUA3 381 aaPredicted RBP13.15□□□□□ -0.3
TMEM248-201ENST00000341567 PCDHGA7Q9Y5G6 932 aa13.15□□□□□ -0.3
TMEM248-201ENST00000341567 MICAL3Q7RTP6 2002 aa13.15□□□□□ -0.3
TMEM248-201ENST00000341567 CACNA1CQ13936 2221 aa13.15□□□□□ -0.3
TMEM248-201ENST00000341567 LOC100130705A0A1B0GUX0 176 aa13.15□□□□□ -0.3
TMEM248-201ENST00000341567 BHMG1C9JSJ3 638 aaPredicted RBP13.15□□□□□ -0.3
TMEM248-201ENST00000341567 TNFRSF11BO00300 401 aa13.15□□□□□ -0.3
TMEM248-201ENST00000341567 FABP3P05413 133 aa13.15□□□□□ -0.3
TMEM248-201ENST00000341567 MAP2K4P45985 399 aa13.15□□□□□ -0.3
TMEM248-201ENST00000341567 HTR6P50406 440 aa13.15□□□□□ -0.3
TMEM248-201ENST00000341567 ANKDD1AQ495B1 522 aa13.15□□□□□ -0.3
TMEM248-201ENST00000341567 RNASE12Q5GAN4 147 aaKnown RBP13.15□□□□□ -0.3
TMEM248-201ENST00000341567 PGM2L1Q6PCE3 622 aa13.15□□□□□ -0.3
TMEM248-201ENST00000341567 CYP4V2Q6ZWL3 525 aaPredicted RBP13.15□□□□□ -0.3
TMEM248-201ENST00000341567 DEPDC4Q8N2C3 294 aa13.15□□□□□ -0.3
TMEM248-201ENST00000341567 CPA6Q8N4T0 437 aa13.15□□□□□ -0.3
TMEM248-201ENST00000341567 ZCCHC10Q8TBK6 192 aa13.15□□□□□ -0.3
TMEM248-201ENST00000341567 PPP1R14BQ96C90 147 aa13.15□□□□□ -0.3
TMEM248-201ENST00000341567 NLE1Q9NVX2 485 aaPredicted RBP13.15□□□□□ -0.3
TMEM248-201ENST00000341567 CLEC4AQ9UMR7 237 aa13.15□□□□□ -0.3
TMEM248-201ENST00000341567 GTF2A1LQ9UNN4 478 aa13.15□□□□□ -0.3
TMEM248-201ENST00000341567 MAGED1Q9Y5V3 778 aaPredicted RBP13.15□□□□□ -0.3
TMEM248-201ENST00000341567 NUP214P35658 2090 aaPredicted RBP13.15□□□□□ -0.3
TMEM248-201ENST00000341567 SNTNA6NMZ2 147 aa13.15□□□□□ -0.3
TMEM248-201ENST00000341567 H0YC42 278 aa13.15□□□□□ -0.3
TMEM248-201ENST00000341567 ABCB7O75027 752 aa13.15□□□□□ -0.3
TMEM248-201ENST00000341567 POP7O75817 140 aaKnown RBP13.15□□□□□ -0.3
TMEM248-201ENST00000341567 SCELO95171 688 aa13.15□□□□□ -0.3
TMEM248-201ENST00000341567 EPOP01588 193 aa13.15□□□□□ -0.3
TMEM248-201ENST00000341567 APODP05090 189 aa13.15□□□□□ -0.3
TMEM248-201ENST00000341567 IL6P05231 212 aa13.15□□□□□ -0.3
TMEM248-201ENST00000341567 ADH5P11766 374 aa13.15□□□□□ -0.3
TMEM248-201ENST00000341567 ALDH3A2P51648 485 aa13.15□□□□□ -0.3
TMEM248-201ENST00000341567 BMXP51813 675 aa13.15□□□□□ -0.3
TMEM248-201ENST00000341567 PRMT2P55345 433 aa13.15□□□□□ -0.3
TMEM248-201ENST00000341567 RPS3AP61247 264 aaKnown RBP13.15□□□□□ -0.3
TMEM248-201ENST00000341567 ELP6Q0PNE2 266 aa13.15□□□□□ -0.3
TMEM248-201ENST00000341567 C9orf64Q5T6V5 341 aa13.15□□□□□ -0.3
TMEM248-201ENST00000341567 RSPO2Q6UXX9 243 aaPredicted RBP13.15□□□□□ -0.3
TMEM248-201ENST00000341567 MAVSQ7Z434 540 aa13.15□□□□□ -0.3
TMEM248-201ENST00000341567 ARMC5Q96C12 935 aa13.15□□□□□ -0.3
TMEM248-201ENST00000341567 DIRAS2Q96HU8 199 aa13.15□□□□□ -0.3
TMEM248-201ENST00000341567 C12orf66Q96MD2 445 aa13.15□□□□□ -0.3
TMEM248-201ENST00000341567 CASD1Q96PB1 797 aa13.15□□□□□ -0.3
TMEM248-201ENST00000341567 CSNK1G1Q9HCP0 422 aa13.15□□□□□ -0.3
TMEM248-201ENST00000341567 SACM1LQ9NTJ5 587 aa13.15□□□□□ -0.3
TMEM248-201ENST00000341567 DNAJC15Q9Y5T4 150 aa13.15□□□□□ -0.3
TMEM248-201ENST00000341567 USP3Q9Y6I4 520 aa13.15□□□□□ -0.3
TMEM248-201ENST00000341567 GMFGO60234 142 aa13.15□□□□□ -0.31
TMEM248-201ENST00000341567 B4GALT3O60512 393 aa13.15□□□□□ -0.31
TMEM248-201ENST00000341567 ZNF8P17098 575 aaPredicted RBP13.15□□□□□ -0.31
TMEM248-201ENST00000341567 GRIA2P42262 883 aa13.15□□□□□ -0.31
TMEM248-201ENST00000341567 CLCNKAP51800 687 aa13.15□□□□□ -0.31
TMEM248-201ENST00000341567 ZNF33AQ06730 810 aa13.15□□□□□ -0.31
TMEM248-201ENST00000341567 COX10Q12887 443 aa13.15□□□□□ -0.31
TMEM248-201ENST00000341567 ATAD3BQ5T9A4 648 aa13.15□□□□□ -0.31
TMEM248-201ENST00000341567 ARMC8Q8IUR7 673 aa13.15□□□□□ -0.31
TMEM248-201ENST00000341567 REM2Q8IYK8 340 aaPredicted RBP13.15□□□□□ -0.31
TMEM248-201ENST00000341567 NXPE1Q8N323 547 aa13.15□□□□□ -0.31
TMEM248-201ENST00000341567 C1orf52Q8N6N3 182 aaKnown RBP13.15□□□□□ -0.31
TMEM248-201ENST00000341567 KCT2Q8NC54 265 aa13.15□□□□□ -0.31
TMEM248-201ENST00000341567 ART5Q96L15 291 aa13.15□□□□□ -0.31
TMEM248-201ENST00000341567 KCNC2Q96PR1 638 aa13.15□□□□□ -0.31
TMEM248-201ENST00000341567 CNPPD1Q9BV87 410 aa13.15□□□□□ -0.31
TMEM248-201ENST00000341567 DPEP2Q9H4A9 486 aa13.15□□□□□ -0.31
TMEM248-201ENST00000341567 SNTG1Q9NSN8 517 aa13.15□□□□□ -0.31
TMEM248-201ENST00000341567 RIMS3Q9UJD0 308 aa13.15□□□□□ -0.31
TMEM248-201ENST00000341567 AP3M1Q9Y2T2 418 aa13.15□□□□□ -0.31
TMEM248-201ENST00000341567 FAM240BA0A1B0GVZ2 78 aa13.14□□□□□ -0.31
TMEM248-201ENST00000341567 DFNA5O60443 496 aa13.14□□□□□ -0.31
TMEM248-201ENST00000341567 KLKB1P03952 638 aa13.14□□□□□ -0.31
TMEM248-201ENST00000341567 CAPN3P20807 821 aa13.14□□□□□ -0.31
TMEM248-201ENST00000341567 NOS3P29474 1203 aa13.14□□□□□ -0.31
TMEM248-201ENST00000341567 OXTRP30559 389 aa13.14□□□□□ -0.31
TMEM248-201ENST00000341567 TM4SF4P48230 202 aa13.14□□□□□ -0.31
TMEM248-201ENST00000341567 RAB25P57735 213 aa13.14□□□□□ -0.31
TMEM248-201ENST00000341567 NFATC3Q12968 1075 aa13.14□□□□□ -0.31
TMEM248-201ENST00000341567 CYP27C1Q4G0S4 372 aa13.14□□□□□ -0.31
TMEM248-201ENST00000341567 SYVN1Q86TM6 617 aa13.14□□□□□ -0.31
TMEM248-201ENST00000341567 KRTCAP2Q8N6L1 136 aa13.14□□□□□ -0.31
TMEM248-201ENST00000341567 C7orf57Q8NEG2 295 aa13.14□□□□□ -0.31
TMEM248-201ENST00000341567 TIFAQ96CG3 184 aa13.14□□□□□ -0.31
TMEM248-201ENST00000341567 PGAP3Q96FM1 320 aaPredicted RBP13.14□□□□□ -0.31
TMEM248-201ENST00000341567 IL4I1Q96RQ9 567 aa13.14□□□□□ -0.31
TMEM248-201ENST00000341567 TUBA8Q9NY65 449 aaPredicted RBP13.14□□□□□ -0.31
TMEM248-201ENST00000341567 CACNB4O00305 520 aaPredicted RBP13.14□□□□□ -0.31
TMEM248-201ENST00000341567 VILLO15195 856 aa13.14□□□□□ -0.31
TMEM248-201ENST00000341567 SLC28A2O43868 658 aa13.14□□□□□ -0.31
TMEM248-201ENST00000341567 ATP1B2P14415 290 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms