RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 CES5AQ6NT32 575 aa14.39□□□□□ -0.11
CLCNKA-201ENST00000331433 SPESP1Q6UW49 350 aa14.39□□□□□ -0.11
CLCNKA-201ENST00000331433 TMEM179BQ7Z7N9 219 aa14.39□□□□□ -0.11
CLCNKA-201ENST00000331433 OR52E4Q8NGH9 312 aa14.39□□□□□ -0.11
CLCNKA-201ENST00000331433 NELL1Q92832 810 aa14.39□□□□□ -0.11
CLCNKA-201ENST00000331433 SDCCAG3Q96C92 435 aa14.39□□□□□ -0.11
CLCNKA-201ENST00000331433 REXO5Q96IC2 774 aaKnown RBP14.39□□□□□ -0.11
CLCNKA-201ENST00000331433 LRIG1Q96JA1 1093 aa14.39□□□□□ -0.11
CLCNKA-201ENST00000331433 PANX1Q96RD7 426 aa14.39□□□□□ -0.11
CLCNKA-201ENST00000331433 FAM83CQ9BQN1 747 aa14.39□□□□□ -0.11
CLCNKA-201ENST00000331433 TOR3AQ9H497 397 aa14.39□□□□□ -0.11
CLCNKA-201ENST00000331433 SGK2Q9HBY8 427 aa14.39□□□□□ -0.11
CLCNKA-201ENST00000331433 SPATA6Q9NWH7 488 aaPredicted RBP14.39□□□□□ -0.11
CLCNKA-201ENST00000331433 TUBA8Q9NY65 449 aaPredicted RBP14.39□□□□□ -0.11
CLCNKA-201ENST00000331433 THEGQ9P2T0 379 aa14.39□□□□□ -0.11
CLCNKA-201ENST00000331433 MAGEB17A8MXT2 336 aa14.38□□□□□ -0.11
CLCNKA-201ENST00000331433 H0YAE9 185 aa14.38□□□□□ -0.11
CLCNKA-201ENST00000331433 FPGTO14772 594 aa14.38□□□□□ -0.11
CLCNKA-201ENST00000331433 B4GAT1O43505 415 aa14.38□□□□□ -0.11
CLCNKA-201ENST00000331433 SOD1P00441 154 aa14.38□□□□□ -0.11
CLCNKA-201ENST00000331433 SRPRAP08240 638 aaKnown RBP14.38□□□□□ -0.11
CLCNKA-201ENST00000331433 HNRNPA1P09651 372 aaKnown RBP eCLIP14.38□□□□□ -0.11
CLCNKA-201ENST00000331433 COX7A2P14406 83 aa14.38□□□□□ -0.11
CLCNKA-201ENST00000331433 SLC6A11P48066 632 aa14.38□□□□□ -0.11
CLCNKA-201ENST00000331433 WNT3P56703 355 aa14.38□□□□□ -0.11
CLCNKA-201ENST00000331433 ACSM2AQ08AH3 577 aa14.38□□□□□ -0.11
CLCNKA-201ENST00000331433 VAC14Q08AM6 782 aa14.38□□□□□ -0.11
CLCNKA-201ENST00000331433 ABHD18Q0P651 414 aa14.38□□□□□ -0.11
CLCNKA-201ENST00000331433 MTAPQ13126 283 aa14.38□□□□□ -0.11
CLCNKA-201ENST00000331433 PPIGQ13427 754 aaKnown RBP eCLIP14.38□□□□□ -0.11
CLCNKA-201ENST00000331433 TSTA3Q13630 321 aaPredicted RBP14.38□□□□□ -0.11
CLCNKA-201ENST00000331433 ACSM2BQ68CK6 577 aa14.38□□□□□ -0.11
CLCNKA-201ENST00000331433 GALNT10Q86SR1 603 aa14.38□□□□□ -0.11
CLCNKA-201ENST00000331433 CLECL1Q8IZS7 167 aa14.38□□□□□ -0.11
CLCNKA-201ENST00000331433 C12orf76Q8N812 135 aaPredicted RBP14.38□□□□□ -0.11
CLCNKA-201ENST00000331433 ATL1Q8WXF7 558 aa14.38□□□□□ -0.11
CLCNKA-201ENST00000331433 DTD2Q96FN9 168 aa14.38□□□□□ -0.11
CLCNKA-201ENST00000331433 FCRL1Q96LA6 429 aa14.38□□□□□ -0.11
CLCNKA-201ENST00000331433 U3KQV3 271 aa14.38□□□□□ -0.11
CLCNKA-201ENST00000331433 A0A1B0GVG6 124 aa14.38□□□□□ -0.11
CLCNKA-201ENST00000331433 LINC01553A4QN01 128 aa14.38□□□□□ -0.11
CLCNKA-201ENST00000331433 OTOL1A6NHN0 477 aaPredicted RBP14.38□□□□□ -0.11
CLCNKA-201ENST00000331433 YY2O15391 372 aa14.38□□□□□ -0.11
CLCNKA-201ENST00000331433 SCN2BO60939 215 aa14.38□□□□□ -0.11
CLCNKA-201ENST00000331433 MYOGP15173 224 aa14.38□□□□□ -0.11
CLCNKA-201ENST00000331433 ACPPP15309 386 aa14.38□□□□□ -0.11
CLCNKA-201ENST00000331433 PRKACGP22612 351 aa14.38□□□□□ -0.11
CLCNKA-201ENST00000331433 CDK9P50750 372 aaKnown RBP14.38□□□□□ -0.11
CLCNKA-201ENST00000331433 FPGSQ05932 587 aa14.38□□□□□ -0.11
CLCNKA-201ENST00000331433 RBBP5Q15291 538 aaKnown RBP14.38□□□□□ -0.11
CLCNKA-201ENST00000331433 GRHL2Q6ISB3 625 aa14.38□□□□□ -0.11
CLCNKA-201ENST00000331433 GPR141Q7Z602 305 aa14.38□□□□□ -0.11
CLCNKA-201ENST00000331433 SFTPA1Q8IWL2 248 aa14.38□□□□□ -0.11
CLCNKA-201ENST00000331433 CELF5Q8N6W0 485 aaKnown RBP14.38□□□□□ -0.11
CLCNKA-201ENST00000331433 PNPT1Q8TCS8 783 aaKnown RBP14.38□□□□□ -0.11
CLCNKA-201ENST00000331433 MAGEB10Q96LZ2 347 aaPredicted RBP14.38□□□□□ -0.11
CLCNKA-201ENST00000331433 OR2AG1Q9H205 316 aa14.38□□□□□ -0.11
CLCNKA-201ENST00000331433 BTBD3Q9Y2F9 522 aa14.38□□□□□ -0.11
CLCNKA-201ENST00000331433 H3BM21 787 aa14.37□□□□□ -0.11
CLCNKA-201ENST00000331433 TRMUO75648 421 aaKnown RBP14.37□□□□□ -0.11
CLCNKA-201ENST00000331433 CPSF4O95639 269 aaKnown RBP14.37□□□□□ -0.11
CLCNKA-201ENST00000331433 LAMP1P11279 417 aa14.37□□□□□ -0.11
CLCNKA-201ENST00000331433 ENGP17813 658 aa14.37□□□□□ -0.11
CLCNKA-201ENST00000331433 SH3BGRP55822 239 aaPredicted RBP14.37□□□□□ -0.11
CLCNKA-201ENST00000331433 SPIDRQ14159 915 aa14.37□□□□□ -0.11
CLCNKA-201ENST00000331433 DUOXA1Q1HG43 343 aa14.37□□□□□ -0.11
CLCNKA-201ENST00000331433 LRRC23Q53EV4 343 aaPredicted RBP14.37□□□□□ -0.11
CLCNKA-201ENST00000331433 ZCCHC8Q6NZY4 707 aaKnown RBP14.37□□□□□ -0.11
CLCNKA-201ENST00000331433 ZNF621Q6ZSS3 439 aa14.37□□□□□ -0.11
CLCNKA-201ENST00000331433 RTL10Q7L3V2 364 aa14.37□□□□□ -0.11
CLCNKA-201ENST00000331433 CLVS1Q8IUQ0 354 aaPredicted RBP14.37□□□□□ -0.11
CLCNKA-201ENST00000331433 TRAPPC5Q8IUR0 188 aa14.37□□□□□ -0.11
CLCNKA-201ENST00000331433 CFAP206Q8IYR0 622 aa14.37□□□□□ -0.11
CLCNKA-201ENST00000331433 GPR156Q8NFN8 814 aa14.37□□□□□ -0.11
CLCNKA-201ENST00000331433 NEIL2Q969S2 332 aa14.37□□□□□ -0.11
CLCNKA-201ENST00000331433 COQ10AQ96MF6 247 aa14.37□□□□□ -0.11
CLCNKA-201ENST00000331433 FOPNLQ96NB1 174 aa14.37□□□□□ -0.11
CLCNKA-201ENST00000331433 SAMD11Q96NU1 681 aa14.37□□□□□ -0.11
CLCNKA-201ENST00000331433 NPLQ9BXD5 320 aaPredicted RBP14.37□□□□□ -0.11
CLCNKA-201ENST00000331433 WBP1LQ9NX94 342 aa14.37□□□□□ -0.11
CLCNKA-201ENST00000331433 PCM1Q15154 2024 aa14.37□□□□□ -0.11
CLCNKA-201ENST00000331433 SOBPA7XYQ1 873 aa14.37□□□□□ -0.11
CLCNKA-201ENST00000331433 H0YIV9 168 aa14.37□□□□□ -0.11
CLCNKA-201ENST00000331433 CLIC1O00299 241 aa14.37□□□□□ -0.11
CLCNKA-201ENST00000331433 ZNF682O95780 498 aa14.37□□□□□ -0.11
CLCNKA-201ENST00000331433 ASLP04424 464 aa14.37□□□□□ -0.11
CLCNKA-201ENST00000331433 PIGAP37287 484 aa14.37□□□□□ -0.11
CLCNKA-201ENST00000331433 PPP2R2BQ00005 443 aa14.37□□□□□ -0.11
CLCNKA-201ENST00000331433 CTBSQ01459 385 aa14.37□□□□□ -0.11
CLCNKA-201ENST00000331433 FNDC3BQ53EP0 1204 aaKnown RBP14.37□□□□□ -0.11
CLCNKA-201ENST00000331433 CCNYL2Q5T2Q4 361 aa14.37□□□□□ -0.11
CLCNKA-201ENST00000331433 C1orf52Q8N6N3 182 aaKnown RBP14.37□□□□□ -0.11
CLCNKA-201ENST00000331433 OR7G3Q8NG95 312 aa14.37□□□□□ -0.11
CLCNKA-201ENST00000331433 OR56A3Q8NH54 315 aa14.37□□□□□ -0.11
CLCNKA-201ENST00000331433 HUS1BQ8NHY5 278 aa14.37□□□□□ -0.11
CLCNKA-201ENST00000331433 ARRDC3Q96B67 414 aa14.37□□□□□ -0.11
CLCNKA-201ENST00000331433 PYURFQ96I23 114 aa14.37□□□□□ -0.11
CLCNKA-201ENST00000331433 HIC2Q96JB3 615 aa14.37□□□□□ -0.11
CLCNKA-201ENST00000331433 DPH2Q9BQC3 489 aaPredicted RBP14.37□□□□□ -0.11
CLCNKA-201ENST00000331433 OSBPL10Q9BXB5 764 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms